Clone BO31546 Report

Search the DGRC for BO31546

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:315
Well:46
Vector:pDNR-Dual
Associated Gene/TranscriptSin-RC
Protein status:BO31546.pep: Imported from assembly
Sequenced Size:1489

Clone Sequence Records

BO31546.complete Sequence

1489 bp assembled on 2012-04-18

GenBank Submission: KX794209

> BO31546.complete
GAAGTTATCAGTCGACATGAGAACAATGCCCGCCCATCCCCACCAGATTC
CCGTATTCCTGTCGAAGAACCTGAGGGACAGCCTGTATCTCTTTCAATAC
CCCACGAAAACGGAGCTCCCCAACCACGATGACTCCGTGATTGTCAATTG
TTGTGTAAAACCAATCGCCCAGGAGGTGAAGGTGGACTTCGGCCTGGACA
TTGAGTCGGCCCACTTCGATCGCTTCAAGGGCGAGCAATTTGCGGTGGCC
GCCGACGGAAAGAACACCTATGGAGCAGTTCCACCAAAGGGTCAGGAGCG
ACCCACCTACAAACGTGGCATCATGGACAAACAGGCCTTCACAAGCTCGC
GTTCCATAACCGATGTGGCCAAGTACATAGTGGGCATCTTTACGGATCGG
GAGGTGCATCTGTCGCCACTTACATCCATAGTCCAAATGCGACCCGTTCT
CAGTCACTTCGATAAGGACGACAAGCGCAAGAAGGCGGAACTGAAGGCTC
AAACGGAGGACACGGACGATGACGAGGTGCTGCAGCAGGTCACGGTTAAA
TTTGCACGAGGAAATGCCAAAAACAGCGGAAAGGAGCAACGTGTCGGCAC
CTACGACAGTTTCGTCCAGCGAATTGCGGATGAGCCGTGGTGCGAGGCCT
ACTGGCACTCGAGGGGCACGCCCACCGCCGAACTGGAGCGCCAGAAGCTC
TTTGCCACCAGTCATCACGGCAGTTCCTCTTTGGCTCTCGCTCCTGACGA
ATATCTTCGAAAGCTTCTGCCCTACGACGAGCATGTGCAGACGGTAGCCC
CAGCAGCTGCTTCTGCTGCCGCCCAAGTACTTCCCGTCTACAACAAGGCC
ATGCTTAAGTCTATGCCGCTGCTGGAACAGCTTACAGTGCTACTGAGAGA
TGCGCGGATGCTCTCGTTCAGCGACGTCATTAGTATTCTCGCGGAGCACG
TGGATCCGCATGTGGCTGCCGACAAGGTGCTGGCTTTGCTGCCCCAGGTG
GGCATCCTACTGCACGGCAACTGGGTGCCGAAATCCGAGGTGGTCTTTCC
CGAGAAGGTGCTTTCCCATGCGAACGGTGTGTCCGCAGAGCAGATGATTC
GCGCCAGAGATTATATACTCTTTCGTTTCTCCCGCACGCCCTACCTGTTC
CGAGCTCAGGTAATGGCCGCCACCCAGTTACCTCCTGCGGAAACACTTGA
CGTTTTGAAGACTGTGGCCCGGGTGAATAACACAAAACGGTGGGAGCTGC
TACTGCCACCCGACAAGGAGTTCGAGCAAAAGTACCCGGAACTGGTCAGC
CGACAGGAGTACCACTGGACCGCTTCCGAGCAGCACTACAATGAAATGGA
CTGGGCTAGGGAAACCAAACGTGTTCGGAAACGTTCGACGAGGAAGAGCG
AATCCCAGTCACTGACTTCAGCCATGCCGCCGCCCGCAATGAATCACTCA
ACAACTGGCTCCGTGGATGCGGCAAGCTTTCTAGACCAT

BO31546.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 05:05:45
Subject Length Description Subject Range Query Range Score Percent Strand
Sin-RC 1458 CG10582-PC 1..1455 17..1471 7275 100 Plus
Sin-RA 1461 CG10582-PA 32..1458 45..1471 7135 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:05:46
Subject Length Description Subject Range Query Range Score Percent Strand
Sin-RC 1673 CG10582-RC 126..1581 16..1471 7280 100 Plus
Sin-RA 1614 CG10582-RA 96..1522 45..1471 7135 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 05:05:43
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 21031950..21033051 16..1117 5510 100 Plus
3L 28110227 3L 21033116..21033469 1118..1471 1770 100 Plus
Blast to na_te.dros performed on 2014-11-28 05:05:44 has no hits.

BO31546.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-18 21:42:51 Download gff for BO31546.complete
Subject Subject Range Query Range Percent Splice Strand
Sin-RC 113..1567 17..1473 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:22:14 Download gff for BO31546.complete
Subject Subject Range Query Range Percent Splice Strand
Sin-RC 127..1581 17..1473 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:43:47 Download gff for BO31546.complete
Subject Subject Range Query Range Percent Splice Strand
Sin-RC 127..1581 17..1473 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:43:47 Download gff for BO31546.complete
Subject Subject Range Query Range Percent Splice Strand
3L 21031951..21033051 17..1117 100 -> Plus
3L 21033116..21033469 1118..1473 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:22:14 Download gff for BO31546.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 21025051..21026151 17..1117 100 -> Plus
arm_3L 21026216..21026569 1118..1473 99   Plus

BO31546.pep Sequence

Translation from 16 to 1489

> BO31546.pep
MRTMPAHPHQIPVFLSKNLRDSLYLFQYPTKTELPNHDDSVIVNCCVKPI
AQEVKVDFGLDIESAHFDRFKGEQFAVAADGKNTYGAVPPKGQERPTYKR
GIMDKQAFTSSRSITDVAKYIVGIFTDREVHLSPLTSIVQMRPVLSHFDK
DDKRKKAELKAQTEDTDDDEVLQQVTVKFARGNAKNSGKEQRVGTYDSFV
QRIADEPWCEAYWHSRGTPTAELERQKLFATSHHGSSSLALAPDEYLRKL
LPYDEHVQTVAPAAASAAAQVLPVYNKAMLKSMPLLEQLTVLLRDARMLS
FSDVISILAEHVDPHVAADKVLALLPQVGILLHGNWVPKSEVVFPEKVLS
HANGVSAEQMIRARDYILFRFSRTPYLFRAQVMAATQLPPAETLDVLKTV
ARVNNTKRWELLLPPDKEFEQKYPELVSRQEYHWTASEQHYNEMDWARET
KRVRKRSTRKSESQSLTSAMPPPAMNHSTTGSVDAASFLDH

BO31546.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:56:35
Subject Length Description Subject Range Query Range Score Percent Strand
Sin-PC 485 CG10582-PC 1..485 1..485 2515 100 Plus
Sin-PA 486 CG10582-PA 11..486 10..485 2458 99.8 Plus