Clone BO31547 Report

Search the DGRC for BO31547

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:315
Well:47
Vector:pDNR-Dual
Associated Gene/TranscriptCG9760-RC
Protein status:BO31547.pep: Imported from assembly
Sequenced Size:826

Clone Sequence Records

BO31547.complete Sequence

826 bp assembled on 2012-04-18

GenBank Submission: KX799393

> BO31547.complete
GAAGTTATCAGTCGACATGTTCGACATCACCTGGCTGCCCACCGCCTGCG
GATCGCTGGCTCCGGCCCTCATCCCGCCAGCGCATATCGTCATCCTGTGG
TACTTCTGGGAGAACTATGCCCGCTACGTGGACAGGCACTTCTGCACCTG
CTCCTGTTGGGACACCGTCTTCAAGGGACCCTACGAGTCGGGCGTGGCGG
CCTACAAGCATATGTACTTCAATGCCACGCCCAACAGCTTCAAGATGTGG
ATTCTGACCGTGTTCGCCGTGATTGCCCTGTACGAGTGCATCAAGAGGCT
AATCGCCCTGATCCTCCAGCAGCGCGTACGGTACTCCATGCTGTTGCTTT
TCCTGCTCTCGATATTTTCGCATTACTACGCCTGGTGGGCGTACATCAAC
TACTACAACGATGACTACTACAATCAGTGGAACCACCAGCTCTTCTTCAC
GGTAACCGAGTTGTTTTCAACGGTCCTAGTGATGCACCTGGCCAACACCA
CCAACGTGGTCACGCCAAAGAAAGTCTTCTGCATTGTCGGCATCGCCCTG
CTGCACATCCTGGCCAGCAGTTTTGATCAGTTCTTCATGAATGTGGTGCG
CGGCGAGGGTTACGCCCACCAGATAGTGCGAGACATCGGGTTCATGGTGC
CTGATCTTCTACAGCTCTTCGTCCCAGTTTGGCTGCTACGACAGACACGT
CGCGAATGTTATACCACGCGACCCTTCCACCGAGATCGGAAACTCCATCG
GGATATTGTGTTGATGCTGTGCCTGGTGTCGCTGCTCTTTGTCATCTGCA
CGGTTTTGGCAAGCTTTCTAGACCAT

BO31547.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 05:05:55
Subject Length Description Subject Range Query Range Score Percent Strand
CG9760-RD 915 CG9760-PD 1..792 17..808 3960 100 Plus
CG9760-RC 795 CG9760-PC 1..792 17..808 3960 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:05:56
Subject Length Description Subject Range Query Range Score Percent Strand
CG9760-RD 2039 CG9760-RD 338..1129 17..808 3960 100 Plus
CG9760-RC 2039 CG9760-RC 338..1129 17..808 3960 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 05:05:53
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 12159144..12159582 455..17 2195 100 Minus
3L 28110227 3L 12157962..12158327 808..443 1800 99.5 Minus
Blast to na_te.dros performed on 2014-11-28 05:05:53 has no hits.

BO31547.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-18 21:42:52 Download gff for BO31547.complete
Subject Subject Range Query Range Percent Splice Strand
CG9760-RC 343..1129 22..810 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:22:16 Download gff for BO31547.complete
Subject Subject Range Query Range Percent Splice Strand
CG9760-RC 343..1129 22..810 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:43:51 Download gff for BO31547.complete
Subject Subject Range Query Range Percent Splice Strand
CG9760-RC 343..1129 22..810 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:43:51 Download gff for BO31547.complete
Subject Subject Range Query Range Percent Splice Strand
3L 12159148..12159577 22..451 100   Minus
3L 12157959..12158318 452..810 99 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:22:16 Download gff for BO31547.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 12151059..12151418 452..810 99 <- Minus
arm_3L 12152248..12152677 22..451 100   Minus

BO31547.pep Sequence

Translation from 16 to 826

> BO31547.pep
MFDITWLPTACGSLAPALIPPAHIVILWYFWENYARYVDRHFCTCSCWDT
VFKGPYESGVAAYKHMYFNATPNSFKMWILTVFAVIALYECIKRLIALIL
QQRVRYSMLLLFLLSIFSHYYAWWAYINYYNDDYYNQWNHQLFFTVTELF
STVLVMHLANTTNVVTPKKVFCIVGIALLHILASSFDQFFMNVVRGEGYA
HQIVRDIGFMVPDLLQLFVPVWLLRQTRRECYTTRPFHRDRKLHRDIVLM
LCLVSLLFVICTVLASFLDH

BO31547.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:56:37
Subject Length Description Subject Range Query Range Score Percent Strand
CG9760-PC 264 CG9760-PC 1..264 1..264 1438 100 Plus
CG9760-PD 304 CG9760-PD 1..264 1..264 1438 100 Plus