BO31547.complete Sequence
826 bp assembled on 2012-04-18
GenBank Submission: KX799393
> BO31547.complete
GAAGTTATCAGTCGACATGTTCGACATCACCTGGCTGCCCACCGCCTGCG
GATCGCTGGCTCCGGCCCTCATCCCGCCAGCGCATATCGTCATCCTGTGG
TACTTCTGGGAGAACTATGCCCGCTACGTGGACAGGCACTTCTGCACCTG
CTCCTGTTGGGACACCGTCTTCAAGGGACCCTACGAGTCGGGCGTGGCGG
CCTACAAGCATATGTACTTCAATGCCACGCCCAACAGCTTCAAGATGTGG
ATTCTGACCGTGTTCGCCGTGATTGCCCTGTACGAGTGCATCAAGAGGCT
AATCGCCCTGATCCTCCAGCAGCGCGTACGGTACTCCATGCTGTTGCTTT
TCCTGCTCTCGATATTTTCGCATTACTACGCCTGGTGGGCGTACATCAAC
TACTACAACGATGACTACTACAATCAGTGGAACCACCAGCTCTTCTTCAC
GGTAACCGAGTTGTTTTCAACGGTCCTAGTGATGCACCTGGCCAACACCA
CCAACGTGGTCACGCCAAAGAAAGTCTTCTGCATTGTCGGCATCGCCCTG
CTGCACATCCTGGCCAGCAGTTTTGATCAGTTCTTCATGAATGTGGTGCG
CGGCGAGGGTTACGCCCACCAGATAGTGCGAGACATCGGGTTCATGGTGC
CTGATCTTCTACAGCTCTTCGTCCCAGTTTGGCTGCTACGACAGACACGT
CGCGAATGTTATACCACGCGACCCTTCCACCGAGATCGGAAACTCCATCG
GGATATTGTGTTGATGCTGTGCCTGGTGTCGCTGCTCTTTGTCATCTGCA
CGGTTTTGGCAAGCTTTCTAGACCAT
BO31547.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 05:05:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9760-RD | 915 | CG9760-PD | 1..792 | 17..808 | 3960 | 100 | Plus |
CG9760-RC | 795 | CG9760-PC | 1..792 | 17..808 | 3960 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:05:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9760-RD | 2039 | CG9760-RD | 338..1129 | 17..808 | 3960 | 100 | Plus |
CG9760-RC | 2039 | CG9760-RC | 338..1129 | 17..808 | 3960 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 05:05:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 12159144..12159582 | 455..17 | 2195 | 100 | Minus |
3L | 28110227 | 3L | 12157962..12158327 | 808..443 | 1800 | 99.5 | Minus |
Blast to na_te.dros performed on 2014-11-28 05:05:53 has no hits.
BO31547.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-18 21:42:52 Download gff for
BO31547.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9760-RC | 343..1129 | 22..810 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:22:16 Download gff for
BO31547.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9760-RC | 343..1129 | 22..810 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:43:51 Download gff for
BO31547.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9760-RC | 343..1129 | 22..810 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:43:51 Download gff for
BO31547.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 12159148..12159577 | 22..451 | 100 | | Minus |
3L | 12157959..12158318 | 452..810 | 99 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:22:16 Download gff for
BO31547.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 12151059..12151418 | 452..810 | 99 | <- | Minus |
arm_3L | 12152248..12152677 | 22..451 | 100 | | Minus |
BO31547.pep Sequence
Translation from 16 to 826
> BO31547.pep
MFDITWLPTACGSLAPALIPPAHIVILWYFWENYARYVDRHFCTCSCWDT
VFKGPYESGVAAYKHMYFNATPNSFKMWILTVFAVIALYECIKRLIALIL
QQRVRYSMLLLFLLSIFSHYYAWWAYINYYNDDYYNQWNHQLFFTVTELF
STVLVMHLANTTNVVTPKKVFCIVGIALLHILASSFDQFFMNVVRGEGYA
HQIVRDIGFMVPDLLQLFVPVWLLRQTRRECYTTRPFHRDRKLHRDIVLM
LCLVSLLFVICTVLASFLDH
BO31547.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:56:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9760-PC | 264 | CG9760-PC | 1..264 | 1..264 | 1438 | 100 | Plus |
CG9760-PD | 304 | CG9760-PD | 1..264 | 1..264 | 1438 | 100 | Plus |