Clone BO31551 Report

Search the DGRC for BO31551

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:315
Well:51
Vector:pDNR-Dual
Associated Gene/TranscriptCG6602-RA
Protein status:BO31551.pep: Imported from assembly
Sequenced Size:1342

Clone Sequence Records

BO31551.complete Sequence

1342 bp assembled on 2012-04-18

GenBank Submission: KX794885

> BO31551.complete
GAAGTTATCAGTCGACATGGCATCTTCATCCGCTTGGCTAGTCCTTCTCA
TGGGCATTGGCCTTTCTGGCGCCCTGGATTTGAATTTACAAAATAGCAGT
AGCAAACTCTTGACGGTTCTCAACACATCTGCTCCGGTTCAAGAGTTGCT
ATACCACATCGATGTCTGGCGAAATGAGGCAGCTGCTGTGGCCCAGGATA
ATCCAACTTCTTCCAACCTGGAATCAGTAATTCGCTCTGAAGTTGGAGGT
GACTGGGAGCGGGGTAGGCTAGTCCTTCAATTAGCGAATCAAGCCAGAAC
TTTGGAGCTCAAGCAGGCTATTTACACAGCGTTGTGGAAGGAGCTCCAGC
AGACCAAGCAGATTTACGATCCCCTAAAGATTTTAGAATTTTATGACCAG
CTGGCTGTGCACACTGATGTTCCACTCCAACTTATGGATCATATTTACCG
GGCTTTCATCAGCCGAAGTGCCCAGTTATTGGAAGCTCCATTTCACACAG
CCAGTCGATTGGCCACTTTTCCATTGGTAAACTCTCTGGTCAATCGTCTA
ACATTCAGCACTTTGGATTATCTGAGAGACATTCTGGAAGTTCTCTACGA
TGCTGTTTTGGCCCTAGAAACACCTTTAAGTGTAGTGCAGCGCCTGGGAA
ATTTAACGGCTAGTTTGAGGCAATTGGCTCAAGCTAATCTTCAATTACTT
AGCAGGGAGGAACTCAAACGTGGAAATCCCGAAGTGCAAAAGGCCCTGCA
GAGCAACATCAGAAATTTGCTTTCGCAGCCTGGGTTTGAAAAAGAAGTTG
CAAAATCCCTCCAATCGGAAATCTATGCACACCTTCCGAAAGACGAGCAA
CTGCTGTACACCGCTCGAAAAGTATGCATCCGGAATGTGACTGAAGAAAA
TTCGTACATTTACGAATGCCCGCAGACGTACCTCATCTGCAGTAACGCTC
GAGATCCAAAGAAGGCTGCGTATTTCATCCAACGTGGTCACAGTAACGAC
AGCCGGCCGCAATTTGCTTTTTATAGTGCCTTCTGGCGTAGTCGCTACAT
CCTCATGGAACCAGCCACTGCAATTGCGAGCAATGCAACCAACTCGATTA
CCAAAAACGTTTACAGCCGACCCAACATTAACTGGTGGAGAGTGGTATAT
GGAAATGGAGGGATTGCCTTTTACGATGCTGCCACTGAAAACTCTGTTCT
GTGCGGTGGCGATCCTTTGCACTGGGATGGCGAGGAGCATCACGTCTACA
CAAGACATGCATCGGAGTTCTCAGCTCATCAGGCAGAGTGCACCTGGAGC
CTCGAAGACTGCAGCGATGCCGCTGCAAGCTTTCTAGACCAT

BO31551.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 05:07:55
Subject Length Description Subject Range Query Range Score Percent Strand
CG6602-RA 1311 CG6602-PA 1..1308 17..1324 6540 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:07:57
Subject Length Description Subject Range Query Range Score Percent Strand
CG6602-RA 1401 CG6602-RA 6..1313 17..1324 6540 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 05:07:53
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 6072144..6073451 17..1324 6540 100 Plus
Blast to na_te.dros performed on 2014-11-28 05:07:54 has no hits.

BO31551.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-18 21:43:01 Download gff for BO31551.complete
Subject Subject Range Query Range Percent Splice Strand
CG6602-RA 1..1308 17..1326 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:22:40 Download gff for BO31551.complete
Subject Subject Range Query Range Percent Splice Strand
CG6602-RA 6..1313 17..1326 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:44:29 Download gff for BO31551.complete
Subject Subject Range Query Range Percent Splice Strand
CG6602-RA 6..1313 17..1326 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:44:29 Download gff for BO31551.complete
Subject Subject Range Query Range Percent Splice Strand
3L 6072144..6073451 17..1326 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:22:40 Download gff for BO31551.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 6065244..6066551 17..1326 99   Plus

BO31551.pep Sequence

Translation from 16 to 1342

> BO31551.pep
MASSSAWLVLLMGIGLSGALDLNLQNSSSKLLTVLNTSAPVQELLYHIDV
WRNEAAAVAQDNPTSSNLESVIRSEVGGDWERGRLVLQLANQARTLELKQ
AIYTALWKELQQTKQIYDPLKILEFYDQLAVHTDVPLQLMDHIYRAFISR
SAQLLEAPFHTASRLATFPLVNSLVNRLTFSTLDYLRDILEVLYDAVLAL
ETPLSVVQRLGNLTASLRQLAQANLQLLSREELKRGNPEVQKALQSNIRN
LLSQPGFEKEVAKSLQSEIYAHLPKDEQLLYTARKVCIRNVTEENSYIYE
CPQTYLICSNARDPKKAAYFIQRGHSNDSRPQFAFYSAFWRSRYILMEPA
TAIASNATNSITKNVYSRPNINWWRVVYGNGGIAFYDAATENSVLCGGDP
LHWDGEEHHVYTRHASEFSAHQAECTWSLEDCSDAAASFLDH

BO31551.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:57:26
Subject Length Description Subject Range Query Range Score Percent Strand
CG6602-PA 436 CG6602-PA 1..436 1..436 2248 100 Plus