BO31577.complete Sequence
937 bp assembled on 2012-04-18
GenBank Submission: KX799648
> BO31577.complete
GAAGTTATCAGTCGACATGCACAGGACATATGTAAGCCATGCGATATACG
CCATTTGGCTGGTTATATTCGCCACTGCCGGCATAATGGCCCAGCTAGAC
CTGGATCAGATCCAGACCCAGCTGCCCGACCAGCTGAGGAAGTCAAACTT
TAGCGTGAACGACGCCAAGGAGCTATTTCGCAACAAATGCATCGAGGTGG
CCGGCGAGGAGGCGGGCGTCGAGGCATACGGCGAGATCGAGTCCGGATTC
ATGGTGCTAACCGAGTGCCTCAATGGCATTGTCAACTACACGGCAATGCA
GCAGGAGATACAGGAAGCGTCGCCCAAGGGCGAACTGGATGTGGTCTTCA
ACAAGTACTGCAGCCGGCGTTCGAATGCCGTCGAGTGTGTGGATGCGTTC
ACGGCCAAACTGGTGCCCTGTCTGGTGCAGGAGGAGCGCGAGGGCCAGGA
TGTCATTAAGCAGATCATCCAGAGTCTGCTCAACTTTGTGTGCCACAAGG
ATGGCGATCAGATAGCCCTGTTCATTGCCGAAAAGGGACCCGAATGCATT
GAGTCCCAGAAGGACAACATTCAGCAGTGCGTGAACAGCACGTTCTCCGA
GTACCTGAACGTGTCGGATCTGCAGGACAACCGCATCAGGAGCATGCCCA
AGCTGACGGTCGGTCAGAAACAGTGCGACGAGATGCTGACTCTGCAGGCG
TGTGTGGTCCGTAAACTGGAGCAATGCTCGGACATAACACCGGCGAATCT
CGTCGAGTCCATGTTCAACTTCATTCGGAACCAAACGATGTGCCGTGACA
ATCAGAAATCGCCGCTCGTTGCGGCTGCCGCCAGCGGAGGGAGTCGGGTA
TTCCATCAAGTGTGGACCCATGTGGGCATCTTTTTGCTAATCCTGCGATT
CGCTCTACAAAAGTCTTCTGCAAGCTTTCTAGACCAT
BO31577.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 05:08:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9917-RB | 906 | CG9917-PB | 1..903 | 17..919 | 4515 | 100 | Plus |
CG9917-RA | 906 | CG9917-PA | 1..903 | 17..919 | 4515 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:08:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9917-RB | 1726 | CG9917-RB | 203..1106 | 16..919 | 4520 | 100 | Plus |
CG9917-RA | 1801 | CG9917-RA | 278..1181 | 16..919 | 4520 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 05:08:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 16322051..16322954 | 919..16 | 4520 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 05:08:47 has no hits.
BO31577.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-18 21:43:05 Download gff for
BO31577.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9917-RA | 297..1199 | 17..921 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:22:50 Download gff for
BO31577.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9917-RA | 279..1181 | 17..921 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:44:45 Download gff for
BO31577.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9917-RA | 279..1181 | 17..921 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:44:45 Download gff for
BO31577.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 16322049..16322953 | 17..921 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:22:50 Download gff for
BO31577.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 16216082..16216986 | 17..921 | 99 | | Minus |
BO31577.pep Sequence
Translation from 16 to 937
> BO31577.pep
MHRTYVSHAIYAIWLVIFATAGIMAQLDLDQIQTQLPDQLRKSNFSVNDA
KELFRNKCIEVAGEEAGVEAYGEIESGFMVLTECLNGIVNYTAMQQEIQE
ASPKGELDVVFNKYCSRRSNAVECVDAFTAKLVPCLVQEEREGQDVIKQI
IQSLLNFVCHKDGDQIALFIAEKGPECIESQKDNIQQCVNSTFSEYLNVS
DLQDNRIRSMPKLTVGQKQCDEMLTLQACVVRKLEQCSDITPANLVESMF
NFIRNQTMCRDNQKSPLVAAAASGGSRVFHQVWTHVGIFLLILRFALQKS
SASFLDH
BO31577.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:57:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9917-PB | 301 | CG9917-PB | 1..301 | 1..301 | 1550 | 100 | Plus |
CG9917-PA | 301 | CG9917-PA | 1..301 | 1..301 | 1550 | 100 | Plus |
CG14629-PA | 319 | CG14629-PA | 32..311 | 23..290 | 518 | 37.7 | Plus |
CG11378-PC | 312 | CG11378-PC | 14..288 | 9..273 | 506 | 38.6 | Plus |
CG11378-PB | 312 | CG11378-PB | 14..288 | 9..273 | 506 | 38.6 | Plus |