Clone BO31577 Report

Search the DGRC for BO31577

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:315
Well:77
Vector:pDNR-Dual
Associated Gene/TranscriptCG9917-RA
Protein status:BO31577.pep: Imported from assembly
Sequenced Size:937

Clone Sequence Records

BO31577.complete Sequence

937 bp assembled on 2012-04-18

GenBank Submission: KX799648

> BO31577.complete
GAAGTTATCAGTCGACATGCACAGGACATATGTAAGCCATGCGATATACG
CCATTTGGCTGGTTATATTCGCCACTGCCGGCATAATGGCCCAGCTAGAC
CTGGATCAGATCCAGACCCAGCTGCCCGACCAGCTGAGGAAGTCAAACTT
TAGCGTGAACGACGCCAAGGAGCTATTTCGCAACAAATGCATCGAGGTGG
CCGGCGAGGAGGCGGGCGTCGAGGCATACGGCGAGATCGAGTCCGGATTC
ATGGTGCTAACCGAGTGCCTCAATGGCATTGTCAACTACACGGCAATGCA
GCAGGAGATACAGGAAGCGTCGCCCAAGGGCGAACTGGATGTGGTCTTCA
ACAAGTACTGCAGCCGGCGTTCGAATGCCGTCGAGTGTGTGGATGCGTTC
ACGGCCAAACTGGTGCCCTGTCTGGTGCAGGAGGAGCGCGAGGGCCAGGA
TGTCATTAAGCAGATCATCCAGAGTCTGCTCAACTTTGTGTGCCACAAGG
ATGGCGATCAGATAGCCCTGTTCATTGCCGAAAAGGGACCCGAATGCATT
GAGTCCCAGAAGGACAACATTCAGCAGTGCGTGAACAGCACGTTCTCCGA
GTACCTGAACGTGTCGGATCTGCAGGACAACCGCATCAGGAGCATGCCCA
AGCTGACGGTCGGTCAGAAACAGTGCGACGAGATGCTGACTCTGCAGGCG
TGTGTGGTCCGTAAACTGGAGCAATGCTCGGACATAACACCGGCGAATCT
CGTCGAGTCCATGTTCAACTTCATTCGGAACCAAACGATGTGCCGTGACA
ATCAGAAATCGCCGCTCGTTGCGGCTGCCGCCAGCGGAGGGAGTCGGGTA
TTCCATCAAGTGTGGACCCATGTGGGCATCTTTTTGCTAATCCTGCGATT
CGCTCTACAAAAGTCTTCTGCAAGCTTTCTAGACCAT

BO31577.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 05:08:49
Subject Length Description Subject Range Query Range Score Percent Strand
CG9917-RB 906 CG9917-PB 1..903 17..919 4515 100 Plus
CG9917-RA 906 CG9917-PA 1..903 17..919 4515 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:08:50
Subject Length Description Subject Range Query Range Score Percent Strand
CG9917-RB 1726 CG9917-RB 203..1106 16..919 4520 100 Plus
CG9917-RA 1801 CG9917-RA 278..1181 16..919 4520 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 05:08:46
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 16322051..16322954 919..16 4520 100 Minus
Blast to na_te.dros performed on 2014-11-28 05:08:47 has no hits.

BO31577.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-18 21:43:05 Download gff for BO31577.complete
Subject Subject Range Query Range Percent Splice Strand
CG9917-RA 297..1199 17..921 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:22:50 Download gff for BO31577.complete
Subject Subject Range Query Range Percent Splice Strand
CG9917-RA 279..1181 17..921 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:44:45 Download gff for BO31577.complete
Subject Subject Range Query Range Percent Splice Strand
CG9917-RA 279..1181 17..921 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:44:45 Download gff for BO31577.complete
Subject Subject Range Query Range Percent Splice Strand
X 16322049..16322953 17..921 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:22:50 Download gff for BO31577.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 16216082..16216986 17..921 99   Minus

BO31577.pep Sequence

Translation from 16 to 937

> BO31577.pep
MHRTYVSHAIYAIWLVIFATAGIMAQLDLDQIQTQLPDQLRKSNFSVNDA
KELFRNKCIEVAGEEAGVEAYGEIESGFMVLTECLNGIVNYTAMQQEIQE
ASPKGELDVVFNKYCSRRSNAVECVDAFTAKLVPCLVQEEREGQDVIKQI
IQSLLNFVCHKDGDQIALFIAEKGPECIESQKDNIQQCVNSTFSEYLNVS
DLQDNRIRSMPKLTVGQKQCDEMLTLQACVVRKLEQCSDITPANLVESMF
NFIRNQTMCRDNQKSPLVAAAASGGSRVFHQVWTHVGIFLLILRFALQKS
SASFLDH

BO31577.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:57:40
Subject Length Description Subject Range Query Range Score Percent Strand
CG9917-PB 301 CG9917-PB 1..301 1..301 1550 100 Plus
CG9917-PA 301 CG9917-PA 1..301 1..301 1550 100 Plus
CG14629-PA 319 CG14629-PA 32..311 23..290 518 37.7 Plus
CG11378-PC 312 CG11378-PC 14..288 9..273 506 38.6 Plus
CG11378-PB 312 CG11378-PB 14..288 9..273 506 38.6 Plus