BO31616.complete Sequence
427 bp assembled on 2012-04-18
GenBank Submission: KX797306
> BO31616.complete
GAAGTTATCAGTCGACATGAATCCTACAATTTATTTGAGCTGCCTTATGG
TCTTCTCAGTGTTTCTGCTGGGAAAGGTAAATGCTGAGAACGAAGATGAG
TTCGTCACAGAAAAACAGCGCCTATTTAGTGTGTATGGTGATTCTTCGGT
TGATGAGGCCACCAAATACCGGAACATCGACAGCCTGGTCACTTTCTACG
ATAAGTACTTCACTCGACTTCAGTTGAAACCGGACTTGAACACACGCGCC
CATGATCTCTTGAGGCGTTACAAGGAGGAAAATGCTCGTGTGGTCTTGGT
GGACGGTACTCCCGCACAAGGCGGATTCTGGTTGCCACTGGTGAAGCTAC
TCATTGTCCAGCTGGGCGTCGAAATTGCCTCTGAGGGAGTCAAGCGTGCT
ATTGAATCCGCAAGCTTTCTAGACCAT
BO31616.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 05:11:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
TotM-RB | 396 | CG14027-PB | 1..393 | 17..409 | 1965 | 100 | Plus |
TotM-RA | 396 | CG14027-PA | 1..393 | 17..409 | 1965 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:11:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
TotM-RB | 511 | CG14027-RB | 34..426 | 17..409 | 1965 | 100 | Plus |
TotM-RA | 552 | CG14027-RA | 34..426 | 17..409 | 1965 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 05:11:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 5329958..5330338 | 29..409 | 1875 | 99.5 | Plus |
Blast to na_te.dros performed on 2014-11-28 05:11:14 has no hits.
BO31616.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-18 21:43:13 Download gff for
BO31616.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
TotM-RA | 34..426 | 17..411 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:23:08 Download gff for
BO31616.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
TotM-RA | 34..426 | 17..411 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:45:29 Download gff for
BO31616.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
TotM-RA | 34..426 | 17..411 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:45:29 Download gff for
BO31616.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 5329890..5329912 | 17..39 | 100 | -> | Plus |
2L | 5329969..5330338 | 40..411 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:23:08 Download gff for
BO31616.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 5329890..5329912 | 17..39 | 100 | -> | Plus |
arm_2L | 5329969..5330338 | 40..411 | 99 | | Plus |
BO31616.pep Sequence
Translation from 16 to 427
> BO31616.pep
MNPTIYLSCLMVFSVFLLGKVNAENEDEFVTEKQRLFSVYGDSSVDEATK
YRNIDSLVTFYDKYFTRLQLKPDLNTRAHDLLRRYKEENARVVLVDGTPA
QGGFWLPLVKLLIVQLGVEIASEGVKRAIESASFLDH
BO31616.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:58:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
TotM-PB | 131 | CG14027-PB | 1..131 | 1..131 | 665 | 100 | Plus |
TotM-PA | 131 | CG14027-PA | 1..131 | 1..131 | 665 | 100 | Plus |
Victoria-PA | 134 | CG33117-PA | 16..126 | 1..113 | 204 | 38.1 | Plus |
TotF-PA | 125 | CG31691-PA | 6..123 | 10..129 | 190 | 39 | Plus |