Clone BO31619 Report

Search the DGRC for BO31619

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:316
Well:19
Vector:pDNR-Dual
Associated Gene/TranscriptCG13559-RA
Protein status:BO31619.pep: Imported from assembly
Sequenced Size:376

Clone Sequence Records

BO31619.complete Sequence

376 bp assembled on 2012-04-18

GenBank Submission: KX795811

> BO31619.complete
GAAGTTATCAGTCGACATGAGTTCCTTCGCCCGGGTTCCCAGCACACCTC
CTCCTTCGTATGAGGAGGCAATGGGCTGGGAAACACGGAGATCACACAGC
ACCACGTGGCTGCTCGCGGAGAATACCTCATCACTCATGATCTGTCCAAT
GTGCCATGACGAGATCGAGACGACCACAAAGATCCGGCGCCGCTGGATCG
CCTACGTGGCCTCGGGCATAGTCTTGTTCACCACCTGCGGCATTGGATGC
TGGCTAATCCCCTGCATCCTCGACTGTTTCAACGAGATCCATCACTCGTG
TCCCGTCTGCAAGGCGACCCTGGGAATCGTTCCGCAGCAGGATCAGAGGT
GGCCAACCGCAAGCTTTCTAGACCAT

BO31619.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 05:11:23
Subject Length Description Subject Range Query Range Score Percent Strand
CG13559-RA 345 CG13559-PA 1..342 17..358 1710 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:11:24
Subject Length Description Subject Range Query Range Score Percent Strand
CG13559-RA 870 CG13559-RA 385..726 17..358 1710 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 05:11:22
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 23503330..23503671 17..358 1710 100 Plus
Blast to na_te.dros performed on 2014-11-28 05:11:22 has no hits.

BO31619.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-18 21:43:14 Download gff for BO31619.complete
Subject Subject Range Query Range Percent Splice Strand
CG13559-RA 1..342 17..360 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:23:10 Download gff for BO31619.complete
Subject Subject Range Query Range Percent Splice Strand
CG13559-RA 385..726 17..360 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:45:33 Download gff for BO31619.complete
Subject Subject Range Query Range Percent Splice Strand
CG13559-RA 385..726 17..360 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:45:33 Download gff for BO31619.complete
Subject Subject Range Query Range Percent Splice Strand
2R 23503330..23503671 17..360 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:23:10 Download gff for BO31619.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 19390853..19391194 17..360 99   Plus

BO31619.pep Sequence

Translation from 16 to 376

> BO31619.pep
MSSFARVPSTPPPSYEEAMGWETRRSHSTTWLLAENTSSLMICPMCHDEI
ETTTKIRRRWIAYVASGIVLFTTCGIGCWLIPCILDCFNEIHHSCPVCKA
TLGIVPQQDQRWPTASFLDH

BO31619.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:58:37
Subject Length Description Subject Range Query Range Score Percent Strand
CG13559-PA 114 CG13559-PA 1..114 1..114 641 100 Plus
CG32280-PD 130 CG32280-PD 16..126 8..103 211 39.6 Plus
CG32280-PC 130 CG32280-PC 16..126 8..103 211 39.6 Plus
CG32280-PB 130 CG32280-PB 16..126 8..103 211 39.6 Plus
CG32280-PA 130 CG32280-PA 16..126 8..103 211 39.6 Plus