BO31620.complete Sequence
538 bp assembled on 2012-04-18
GenBank Submission: KX796230
> BO31620.complete
GAAGTTATCAGTCGACATGGATCAGAAGCGAGCCATGCTTTATCCGCAAG
TGGATTTCAACGCCCCGACGGCCCCCTCGCCGACGCCAACGAGGGAGTTG
GGCAATCCCATCGCCAACGGCCTGCCCATCGAGGCTCCTCCGTCGTACGA
TGTGGCGGTGTCTGTTCCGGTGGCTCCAGCGGTTTCCGCACCAGCAATCG
CCCCAGCACGACCACCGCCAGTGGTTGTCGTGGAGCAACCAGCCCCACAA
CCACCCACAGTGGTTCCAACAGATACTCTACACTTGGGTCCAAATCGAAG
TAGGGTTCTCTGCCCAGCCTGTGGAGCCAACAAAACTACGAGGATGACAC
ACACGGCTAACTCCAGGACCCATATGGTGGCAGGTCTTCTCTGTTTGGTC
GGATTCTGCTGCTGTGCCTGTTTTGTTCCCTATTGCATGAACAGTTGCCG
TACTGGAAACCACTATTGTCGCAAGTGTAACACCTTCCTGGGAGCCTACA
ATCCAAAGGGGATGAACCGAGCAAGCTTTCTAGACCAT
BO31620.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 05:11:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13516-RB | 507 | CG13516-PB | 1..504 | 17..520 | 2475 | 99.4 | Plus |
CG13516-RA | 507 | CG13516-PA | 1..504 | 17..520 | 2475 | 99.4 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:11:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13516-RB | 1319 | CG13516-RB | 455..959 | 16..520 | 2480 | 99.4 | Plus |
CG13516-RA | 1032 | CG13516-RA | 168..672 | 16..520 | 2480 | 99.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 05:11:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 22669599..22669855 | 16..272 | 1270 | 99.6 | Plus |
2R | 25286936 | 2R | 22669921..22670053 | 270..402 | 650 | 99.2 | Plus |
2R | 25286936 | 2R | 22670144..22670262 | 402..520 | 580 | 99.2 | Plus |
Blast to na_te.dros performed on 2014-11-28 05:11:32 has no hits.
BO31620.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-18 21:43:14 Download gff for
BO31620.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13516-RA | 145..648 | 17..522 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:23:11 Download gff for
BO31620.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13516-RA | 169..672 | 17..522 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:45:36 Download gff for
BO31620.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13516-RA | 169..672 | 17..522 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:45:36 Download gff for
BO31620.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 22669600..22669855 | 17..272 | 99 | -> | Plus |
2R | 22669924..22670053 | 273..402 | 99 | -> | Plus |
2R | 22670145..22670262 | 403..522 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:23:11 Download gff for
BO31620.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 18557105..18557360 | 17..272 | 99 | -> | Plus |
arm_2R | 18557429..18557558 | 273..402 | 99 | -> | Plus |
arm_2R | 18557650..18557767 | 403..522 | 97 | | Plus |
BO31620.pep Sequence
Translation from 16 to 538
> BO31620.pep
MDQKRAMLYPQVDFNAPTAPSPTPTRELGNPIANGLPIEAPPSYDVAVSV
PVAPAVSAPAIAPARPPPVVVVEQPAPQPPTVVPTDTLHLGPNRSRVLCP
ACGANKTTRMTHTANSRTHMVAGLLCLVGFCCCACFVPYCMNSCRTGNHY
CRKCNTFLGAYNPKGMNRASFLDH
BO31620.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:58:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13516-PB | 168 | CG13516-PB | 1..168 | 1..168 | 929 | 100 | Plus |
CG13516-PA | 168 | CG13516-PA | 1..168 | 1..168 | 929 | 100 | Plus |
CG30273-PB | 128 | CG30273-PB | 19..126 | 41..162 | 247 | 39.3 | Plus |
CG30269-PB | 144 | CG30269-PB | 6..144 | 17..164 | 225 | 35.8 | Plus |
CG30269-PA | 144 | CG30269-PA | 6..144 | 17..164 | 225 | 35.8 | Plus |