BO31624.complete Sequence
937 bp assembled on 2012-04-18
GenBank Submission: KX795252
> BO31624.complete
GAAGTTATCAGTCGACATGTTGGACAATAATTCTTGTGCGCAAACCAATA
TTTTAACCAGTAAAGAAATGGCGAATAACAGCCCGACCCGCGGCTCTGTC
ATGCTGCTGACGCTGGTTTTGCTGCTACTGAGTAGAAAAATCGGTTTGGT
AGATGGGCACAAAGTTACGGCTACGTCAATTTCCAATCACAATTACCCGG
TAGAAGAGCATACAGTCATCACCCATGATGACTACATCCTTACTATTTAC
CGCATCCCATCATCCCCAAACCGAAGTCATCTAAATAGAGCTGGGCGAAG
GGCTGTAGTGTTTTTGCAACATGGCATCCTGAGTGCTTCCGACGACTGGA
TTATAAACGGACCAGAGGCGTCTCTGGCCTACATGCTTGCAGACGCCGGC
TACGATGTCTGGCTGGGCAATGCACGTGGCAACACGTACTCACGGCAGCA
CAAGCATATCCATCCGGACACGTCCGACTTTTGGCGTTTCAGCTGGCACG
AGATAGGTGTCTATGACCTCGCAGCCATGCTAGACTATGCGCTGGCGAAG
AGTCAGTCCAGCTCTTTGCATTTTGTTGCACACTCGCAGGGTACCACGGC
GTTCTTTGTACTTATGTCTTCTCTGCCTTTGTACAACGAAAAGTTGCGTT
CCGTGCACCTATTGGCGCCCATAGCTTACATGCGTGACCACTCTTTTATT
CTGTCCAAGCTGGGTGGCATTTTTCTGGGAACGCCGTCCTTTCTTAGCTG
GGTATTAGGAAGTATGGAGCTGCTACCTATTACTAATTTACAGAAACTGA
TATGTGAGCACATCTGTTCCAGTAGCTCCATGTTTAACTTTCTGTGCTCT
GGTCTGCTGGACTTCATCGGAGGGTGGGGAACACGACACTTGAACCAGGT
CAGGCGACTTCCGACAGTAGCAAGCTTTCTAGACCAT
BO31624.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 05:10:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3635-RC | 906 | CG3635-PC | 1..903 | 17..919 | 4515 | 100 | Plus |
| CG3635-RB | 1278 | CG3635-PB | 1..882 | 17..898 | 4410 | 100 | Plus |
| Lip3-RA | 1185 | CG8823-PA | 229..347 | 323..441 | 220 | 79 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:10:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3635-RC | 1301 | CG3635-RC | 36..938 | 17..919 | 4515 | 100 | Plus |
| CG3635-RB | 1381 | CG3635-RB | 36..917 | 17..898 | 4410 | 100 | Plus |
| Lip3-RA | 1434 | CG8823-RA | 387..505 | 323..441 | 220 | 79 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 05:10:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 22182737..22183468 | 169..900 | 3660 | 100 | Plus |
| 2L | 23513712 | 2L | 22175450..22175603 | 17..170 | 770 | 100 | Plus |
| 3R | 32079331 | 3R | 13371246..13371364 | 441..323 | 220 | 79 | Minus |
| 3L | 28110227 | 3L | 20460998..20461069 | 374..445 | 195 | 84.7 | Plus |
Blast to na_te.dros performed on 2014-11-28 05:10:56 has no hits.
BO31624.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-18 21:43:12 Download gff for
BO31624.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3635-RC | 41..938 | 22..921 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:23:05 Download gff for
BO31624.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3635-RC | 41..938 | 22..921 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:45:24 Download gff for
BO31624.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3635-RC | 41..938 | 22..921 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:45:24 Download gff for
BO31624.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 22175455..22175602 | 22..169 | 100 | -> | Plus |
| 2L | 22182738..22183466 | 170..898 | 100 | -> | Plus |
| 2L | 22183608..22183628 | 899..921 | 91 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:23:05 Download gff for
BO31624.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 22175455..22175602 | 22..169 | 100 | -> | Plus |
| arm_2L | 22182738..22183466 | 170..898 | 100 | -> | Plus |
| arm_2L | 22183608..22183628 | 899..921 | 91 | | Plus |
BO31624.pep Sequence
Translation from 16 to 937
> BO31624.pep
MLDNNSCAQTNILTSKEMANNSPTRGSVMLLTLVLLLLSRKIGLVDGHKV
TATSISNHNYPVEEHTVITHDDYILTIYRIPSSPNRSHLNRAGRRAVVFL
QHGILSASDDWIINGPEASLAYMLADAGYDVWLGNARGNTYSRQHKHIHP
DTSDFWRFSWHEIGVYDLAAMLDYALAKSQSSSLHFVAHSQGTTAFFVLM
SSLPLYNEKLRSVHLLAPIAYMRDHSFILSKLGGIFLGTPSFLSWVLGSM
ELLPITNLQKLICEHICSSSSMFNFLCSGLLDFIGGWGTRHLNQVRRLPT
VASFLDH
BO31624.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:58:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3635-PC | 301 | CG3635-PC | 1..301 | 1..301 | 1579 | 100 | Plus |
| CG3635-PB | 425 | CG3635-PB | 1..302 | 1..303 | 1546 | 98 | Plus |
| CG8093-PB | 398 | CG8093-PB | 31..271 | 51..294 | 626 | 47.1 | Plus |
| CG8093-PA | 398 | CG8093-PA | 31..271 | 51..294 | 626 | 47.1 | Plus |
| Lip3-PA | 394 | CG8823-PA | 2..267 | 24..293 | 601 | 43.8 | Plus |
