BO31655.complete Sequence
2794 bp assembled on 2012-04-30
GenBank Submission: KX793785
> BO31655.complete
GAAGTTATCAGTCGACATGGCAGCTAACAACAACAATAGCATCATACACA
ACCTGGGCGCGGGGACGGAGGGCTTGCTCTCCTCCGTGATTGCGTCGACG
GGGACTCCTGGCATGGGATCCTCGCCCGTGCCCTCCAGAGCATCTTCATC
GTCCGCCTCCTCCGCCGCACAGAGTGCTTGGGATCAATTGACGGCGAGTG
CCTCCAACAACATGTCACCTTCACCCACGGCAGGAGCGCCCACGGTCACG
GGACCCATTCTACCAGACAATCTGGGCGTAGGAGCGGGCAGTTCACCGGT
GGCCAGTTGCTCCTCCCCCTCGACGCCCACGAAAACACATGCGCCCTCAC
CGCTGGAGAGCATGGGCCATACACCGCAAGGTCCGCCAACCTTGGGACCC
GGTGGATATGGCGAGGAGCTAACCGCCGAGCTGGTAAACCAGGGATGGCG
GAAATTCTGGTCCAAGAGGGAAAACCGCCCATACTATTGGAACAAAGTCA
CCGGCGAATCGCTGTGGGAGATGCCCGGCACCAGACCCTTTGATCCGCTC
ACCGACCCTTTGGGCATCTGCCATGCGGGCGGTCCGACGCCGATCATCCC
CAATATGCACCAGCAGCAACAGCACCAGCATCATCACCTGAAGCGGCGGC
CGTCGGATGACATGCACATCCATCCCAATCAGCATCATATGGGCGGCGGA
CCTCCAATGAAGAAGTTTGTTCTGGCCGGTCCCTGGGACCTGGAGGTGTG
CACCAATGCCGTTATTGTAGAGCGACCGCCGACACTTCTGCCGCAACCGC
ATCCTGAGGTAGAGGCTTTACGGGCAGCCTTCACCATGAAGCTGCTGAAA
ACCTACGAAGATCTGTGCATGCGGAGAGAAAATATAAAGGCACCCAGAGA
TTCCTTCAACCGCTGGCTGATGGAACGCAAGGTGATAGACACCGGCTGCG
ACCCGCTGCTGCCCAGCAGTTGCATGCCGGAGATCTCCAGCTCCATGTAC
CGCGAGATCATGTCGGATATACCTATCAAGATAGTGAAGCCCAAGTTCAC
AGGGGATGCCAGGAAGCAGCTTTCCCGCTACGCAGAGGCCGCTAAGCAGA
TAATAGAATCCCGATCCGCGCCGGCGGAATCCAAGAAGGTCGTCAAGTGG
AATGTGGAGGACACATTTCAATGGCTGAGGCGTACCGTGGGCGCGAGCTA
CGAGGATTTTCAGGACCGTTTGGCCCATCTTAAACGGCAATGTGAGCCAC
ATTTGGTTGAGACCGTCAAGAGTTCTGTGGAAACCTTGTGCGTGAAAATC
TATCACTTGTCGGCTGATCATGCCCGCAAGATCCGTGAGCGCCATTCGCA
GCTGCTCAAGGAGCACGGAATACCGGAACCCACGCCTCCTCCGCCGCCGC
CACATCTAAAGAAAGTGTGGTGCTATCCCATACAGTTTGCCGTCCCATCG
CCTCGGATGCCGACGATCGAGTACTTACAGGATCGCGACCACATGATCAT
CAAGTACACGCCCGCCACGATCAACCAGCCAGATGCTCAGTACATCAACC
TTACCTATCTACAGAAGCTGGAACAGCTGTACCGCCACAACTGTTTCGAC
GACAAGAAGTTCGATCTGTTCATTGGCCGGGTATGGTGTCTGCTCAAGAG
GTACCAGACCTTCCTGGGCAATGCCCTGAATTCCTCCCAGGAGGCGGAGC
TTACCCAGGCTGCCTTGCCAGTGCCAGTGTTCGAGTGCCTACATAGGCAG
TTTGGTGTAAGCTTCGAGTGCTTCGCCTCGCCATTCAATTCCTATTTCCG
ACAGTACTGCTCTGCGTTTGCCGACACGGATGCCTACTTCGGTTCCAGGG
GGCCCTTCCTCGACTTCAAGCCCGTTTCCGGTTCCTTCCAAGTAAACCCT
CCTCATTGCGAGGAGCTGATTGAGGCTTCTTTGCTGCACATCGACAAACT
GCTCACAGACACCATGGAGCCTCTGAGCTTTATTGTGTTTCTGCCGGAGT
GGAAGAGCATATCCAAGCTGGACGACAGCATGTACAAGCGCCGTTCAATG
GTGGTATTGGGCATGGCCCACGAGTACAGACACGGCTATCAGCACATGTT
GCAAAAGTCTGATGTGCTGATCAAGTGCATGCAGGGCACACAGGTGGTGT
GGTTGCAAAATAGCGCCGGATACGCGCGATGGGGACCCAATGAAATTCGC
GTGGAGGCACTGCGTGAGGCCTTCAGGCCACAACGAGATCGGGAGCGTGA
GCGGGCTGCAGCTGCGGCGGCAGCAGCTGGGGTAACCTCCAGCCAGCAAT
CGCCATCGACGCCCCCATCCGCCGCATCCACGGCTCCAACAACCAACTCC
TGTACGATCAGTGGAGTCAATAGCAACAGCTCATCCACAGCCACTACAAC
GAGCACAAGCAGCAGCCCGTCGCTGACCACAACATCGTCCTCAATGTCGC
CACTGTCCCCGCACACGCCCACCGGGAATCCGCCGCCACAGTTTCCGATG
ACCATCAGCAACACCAGCAGTAGCAGCAATTTGGTGGCCGCCTCGCCCAC
AATGAGTGTGCAAAGCGATTGCTCTTCGCCCTCCTCGTCGACGATGTCTC
TTTCACCGGCTCCTGCTTCGGGCGGCTATCCGGATGGAGTGACATCTGCC
ACAGCGGCAGCGGTGAGCATTACGGCAACGACTACCACATCGGCTGCTGG
AGCGGGATCTGCATTTGGCCAGGCCAATAGCATCAGTAGTTCCGCATCCA
CGCAAGCGGTCATCAACTCAGCCGTCGCAAGCTTTCTAGACCAT
BO31655.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 12:36:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11399-RB | 2763 | CG11399-PB | 1..2760 | 17..2776 | 13785 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:36:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11399-RB | 4254 | CG11399-RB | 183..2943 | 16..2776 | 13790 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 12:36:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 20782772..20784608 | 1852..16 | 9185 | 100 | Minus |
3L | 28110227 | 3L | 20781661..20782330 | 2776..2107 | 3350 | 100 | Minus |
3L | 28110227 | 3L | 20782389..20782521 | 2108..1976 | 665 | 100 | Minus |
3L | 28110227 | 3L | 20782585..20782711 | 1977..1851 | 620 | 99.2 | Minus |
Blast to na_te.dros performed 2014-11-28 12:36:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6809..6888 | 608..687 | 130 | 62.5 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2322..2364 | 608..650 | 125 | 76.7 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6797..6839 | 608..650 | 125 | 76.7 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2620..2673 | 593..644 | 121 | 74.5 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6776..6855 | 608..687 | 121 | 61.3 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2356..2414 | 593..652 | 117 | 68.3 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6713..6763 | 600..652 | 116 | 71.7 | Plus |
BO31655.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-30 10:04:20 Download gff for
BO31655.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11399-RB | 193..2952 | 17..2778 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:45:39 Download gff for
BO31655.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11399-RB | 184..2943 | 17..2778 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:07:54 Download gff for
BO31655.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11399-RB | 184..2943 | 17..2778 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 13:07:54 Download gff for
BO31655.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 20781659..20782330 | 2107..2778 | 99 | <- | Minus |
3L | 20782391..20782519 | 1978..2106 | 100 | <- | Minus |
3L | 20782585..20782710 | 1852..1977 | 99 | <- | Minus |
3L | 20782773..20784607 | 17..1851 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:45:39 Download gff for
BO31655.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 20774759..20775430 | 2107..2778 | 99 | <- | Minus |
arm_3L | 20775491..20775619 | 1978..2106 | 100 | <- | Minus |
arm_3L | 20775685..20775810 | 1852..1977 | 99 | <- | Minus |
arm_3L | 20775873..20777707 | 17..1851 | 100 | | Minus |
BO31655.pep Sequence
Translation from 16 to 2794
> BO31655.pep
MAANNNNSIIHNLGAGTEGLLSSVIASTGTPGMGSSPVPSRASSSSASSA
AQSAWDQLTASASNNMSPSPTAGAPTVTGPILPDNLGVGAGSSPVASCSS
PSTPTKTHAPSPLESMGHTPQGPPTLGPGGYGEELTAELVNQGWRKFWSK
RENRPYYWNKVTGESLWEMPGTRPFDPLTDPLGICHAGGPTPIIPNMHQQ
QQHQHHHLKRRPSDDMHIHPNQHHMGGGPPMKKFVLAGPWDLEVCTNAVI
VERPPTLLPQPHPEVEALRAAFTMKLLKTYEDLCMRRENIKAPRDSFNRW
LMERKVIDTGCDPLLPSSCMPEISSSMYREIMSDIPIKIVKPKFTGDARK
QLSRYAEAAKQIIESRSAPAESKKVVKWNVEDTFQWLRRTVGASYEDFQD
RLAHLKRQCEPHLVETVKSSVETLCVKIYHLSADHARKIRERHSQLLKEH
GIPEPTPPPPPPHLKKVWCYPIQFAVPSPRMPTIEYLQDRDHMIIKYTPA
TINQPDAQYINLTYLQKLEQLYRHNCFDDKKFDLFIGRVWCLLKRYQTFL
GNALNSSQEAELTQAALPVPVFECLHRQFGVSFECFASPFNSYFRQYCSA
FADTDAYFGSRGPFLDFKPVSGSFQVNPPHCEELIEASLLHIDKLLTDTM
EPLSFIVFLPEWKSISKLDDSMYKRRSMVVLGMAHEYRHGYQHMLQKSDV
LIKCMQGTQVVWLQNSAGYARWGPNEIRVEALREAFRPQRDRERERAAAA
AAAAGVTSSQQSPSTPPSAASTAPTTNSCTISGVNSNSSSTATTTSTSSS
PSLTTTSSSMSPLSPHTPTGNPPPQFPMTISNTSSSSNLVAASPTMSVQS
DCSSPSSSTMSLSPAPASGGYPDGVTSATAAAVSITATTTTSAAGAGSAF
GQANSISSSASTQAVINSAVASFLDH
BO31655.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:26:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11399-PB | 920 | CG11399-PB | 1..920 | 1..920 | 4869 | 100 | Plus |