BO31668.complete Sequence
2752 bp assembled on 2012-05-15
GenBank Submission: KX793871
> BO31668.complete
GAAGTTATCAGTCGACATGCGAATTTTGTGGATTGCAGCTATATCGTTCT
CGTGGCAATTTTCAGACGCCTTTTATTATATGCCCAAATTTCTTTGCATT
CCACCATTTGTGGCCATTAATGGAAGCTGCCTTATTCCAACCCCCAAAGA
ACCCACGATATTGCCCTGTTTGAAAAACCTTCAAAACTCCACGGTGTTTC
CGGAAAATCGTGAAATAGTTACCGTTAGTCCCCCGAATTTAATAACGGAA
GATGGTGCTACTATCGGAGAAAGCCATTCTAAAGATGAAAAGCCTAATCT
TTCTATCAAAGTACCAGTAAAGGAAGCAGGAGCAGTTGAAGGCGATAAGA
CAAACGAAGATTTAAATCCGACCGTCCCTAATGCAAATAAAGTGCCTACT
GATAGTTCGGAAAATACCTTAGATTCGGAACCCAATGACAATTTTGTTGG
TAAGCCCGAAGACTCCAATCAAAACGAAAGTAATCCGGATATTATAACAC
CGAGTCAACATGCAAATTCGAGCATAATTTCAACAAACCAAGGACAAGAA
ACAAATGAAAGCAACATTCCGGAAAAAGGATCTAATACAGACAGTAAATT
AAAACCGACAATTTCGGAAGATTCCCAAGTAAATAATATACCCCCGAAAG
AAGGAGCATTTCAAGGCGATAATACAAATAAAGATTTAAATCCGACGGTT
CCTGATGAGAGTAATGTACCTACTGAAAGTTCAGAAAATACCTCAGATTC
GGAATTCGATGACAACAATATTGGTAAGCCCGAAGACTCCGATCAAAACG
AAAGTAATCCGGATATTGTAACGCCGAGTCAACATGAAAATTCGAGTCTA
ATTTCAACAAATCATGGACAAGAAACAAATGAAAGCAACCTTCCAGAAAA
TGGATCTAATAAAGGCAGTAAATTAAAACTGCCTACTCCGGAAAATTCCC
AAATAAATCAAACACCTCCGGAAGCAGGAGCAGTCAACCAAGATTTAAAT
CCGACCGTTCCTGATGCTAATAAATTGCCTACTGAAAGTTCAGAAAATGC
CTTAGATTCGGAGTTCAATGGCAACAATGTTGGTAAGCCCGAAGACTCCC
ATCAAAACGAAAGTAATCCGGATATTATAACACCGAGTAAACATGAAAAT
TCGAGCCTAATCTCAACAAATCCTGGACAAGAAACAAATGGAATCAGAGA
TCCTGTAAATGGATCTAATGCAATCAGCACATTAAAACCGCCTGTTTCGG
AAAATTCCCAAATAAATCAAATACCTTCGGAAGCAGGAGAAGTTGAAGGT
GATAAGGCAAACAAAGACTTAAATCTGGATGATCCTAATGTAAATAAATT
GAGTTCAGAAAATACTATAAATTCGGGACCCAACAATACGAATATTAGTA
AGCCCGAAGACTGCGACCCAAACGAAAGTAATTCCAATATCATTGCACCG
AATAAACCTGCGAATTCGAGCATAACTTCAACAAATCCTGGACAAGAAGC
AAATGGAATCAGATATCCTGTAAATGGATCGATTGCAAGCAGCATATTAA
ATCCGAATGTTTCGAAGCCAACGAAGCTTGATGGTAAAAATTTTGAAAGT
AACCTAGCCGTAGGAAACGAAAATAAAACTGAAAACATAACAGAAGACCC
CAACCAGAATCCGAAAAAGGAAAACACAATAGTTTCGTCGATTTCGGAAA
ATCCTACAATGAACAAAACTGGTGGTTTACTTACCGAAAACATGGAAGGG
CTATCAAGTACTTCCTCAGCTAAGATACCTAGTACAAGACCAACAATTTC
TCAACCTCCTAAAAAGGGAATTGCTATTTTGCCGGTTAAAAGGCCCTCAA
GAATTTACTCAACCGATGATTTGAATCCTCCAAAATTCGAAATACCTTCG
ATTTCAGGAGCAGATGCTGGTGTTCTTCCGATAAGTCCTTCAATTCCTGA
TACAGATAAAATAAACAGTGGTATCTTACCATCAGGAATACCAATACAAA
CACCTTTACCCGTTGATTTAAATCCTTCAAAAGATCCTTCGATGCCCGAA
ATGTTGCCAGTGAGAGATCCTTCAATTCCTGACACAGAAAATTTGATTAA
AAATACATTGCCACCCGAAGGGCCGTCAAAAATTGTCTTACCCGGAGATT
TGCATACACCGATAATTCCTGATACTAATGAAGTTATAAATGGCTTATTA
CCATCCGAACGTCCGAATCAAATACCATTGTCTGGGAATACAAGTCATCC
AAATACACACTCAATAACTGGGATAGGATCTGCAACTAAGCCAGTAGTTC
CTGCTCTTCCTGGCACAGATAATTTGACGCCGAAGATAATTGATCCCAAA
ATTCATATTCCTGAGTCGAAAGAGCCAATACTACCAAAGATTCCTGAGAC
GGATCATTTAATAAATGAAGAAGATTTGATCGGTAAACAACAATCACCTA
AAATTCACATACCCGGGGCGCCGAAGATAAATGATCCCAAAATTCATATT
CCTGAGTCCAAAGAGCCAATACTACCAAAGATTCCTGAGACGGATCATTT
GATAAATGAAGATTTGATCCGTAAACCACAATCACCCAAAATTCACATAC
CCGAGACGCCGAAGATAATTGAGCCTAAAATTCAGATTCCCAAGGATCCA
AAAATGCCCAAATTAATTAGACCTGAAGACCTATATCCGAAAGATATAAA
TATCTATGAACTTTTGCCAAAGGACATGTTTGCCGCAAGCTTTCTAGACC
AT
BO31668.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:19:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30395-RB | 2721 | CG30395-PB | 1..2718 | 17..2734 | 13590 | 100 | Plus |
| CG30395-RB | 2721 | CG30395-PB | 308..968 | 648..1293 | 1620 | 83.4 | Plus |
| CG30395-RB | 2721 | CG30395-PB | 632..1277 | 324..984 | 1620 | 83.4 | Plus |
| CG30395-RB | 2721 | CG30395-PB | 337..890 | 986..1530 | 950 | 78.5 | Plus |
| CG30395-RB | 2721 | CG30395-PB | 970..1514 | 353..906 | 950 | 78.5 | Plus |
| CG30395-RB | 2721 | CG30395-PB | 2312..2486 | 2469..2640 | 615 | 91.4 | Plus |
| CG30395-RB | 2721 | CG30395-PB | 2453..2624 | 2328..2502 | 615 | 91.4 | Plus |
| CG30395-RB | 2721 | CG30395-PB | 1060..1233 | 1391..1564 | 450 | 83.9 | Plus |
| CG30395-RB | 2721 | CG30395-PB | 1375..1548 | 1076..1249 | 450 | 83.9 | Plus |
| CG30395-RB | 2721 | CG30395-PB | 306..541 | 1279..1505 | 320 | 76.7 | Plus |
| CG30395-RB | 2721 | CG30395-PB | 1263..1489 | 322..557 | 320 | 76.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:19:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30395-RB | 2870 | CG30395-RB | 47..2768 | 13..2734 | 13595 | 100 | Plus |
| CG30395-RB | 2870 | CG30395-RB | 358..1018 | 648..1293 | 1620 | 83.4 | Plus |
| CG30395-RB | 2870 | CG30395-RB | 682..1327 | 324..984 | 1620 | 83.4 | Plus |
| CG30395-RB | 2870 | CG30395-RB | 387..940 | 986..1530 | 950 | 78.5 | Plus |
| CG30395-RB | 2870 | CG30395-RB | 1020..1564 | 353..906 | 950 | 78.5 | Plus |
| CG30395-RB | 2870 | CG30395-RB | 2362..2536 | 2469..2640 | 615 | 91.4 | Plus |
| CG30395-RB | 2870 | CG30395-RB | 2503..2674 | 2328..2502 | 615 | 91.4 | Plus |
| CG30395-RB | 2870 | CG30395-RB | 1110..1283 | 1391..1564 | 450 | 83.9 | Plus |
| CG30395-RB | 2870 | CG30395-RB | 1425..1598 | 1076..1249 | 450 | 83.9 | Plus |
| CG30395-RB | 2870 | CG30395-RB | 356..591 | 1279..1505 | 320 | 76.7 | Plus |
| CG30395-RB | 2870 | CG30395-RB | 1313..1539 | 322..557 | 320 | 76.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:19:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 21765747..21765907 | 163..323 | 805 | 100 | Plus |
| 2R | 25286936 | 2R | 21765535..21765685 | 13..163 | 740 | 99.3 | Plus |
| 2R | 25286936 | 2R | 21769565..21769707 | 2326..2468 | 715 | 100 | Plus |
| 2R | 25286936 | 2R | 21769766..21769904 | 2467..2605 | 695 | 100 | Plus |
| 2R | 25286936 | 2R | 21766103..21766235 | 370..502 | 665 | 100 | Plus |
| 2R | 25286936 | 2R | 21766635..21766767 | 694..826 | 665 | 100 | Plus |
| 2R | 25286936 | 2R | 21767109..21767241 | 1003..1135 | 665 | 100 | Plus |
| 2R | 25286936 | 2R | 21769964..21770094 | 2604..2734 | 655 | 100 | Plus |
| 2R | 25286936 | 2R | 21767611..21767734 | 1327..1450 | 620 | 100 | Plus |
| 2R | 25286936 | 2R | 21768719..21768834 | 1900..2015 | 580 | 100 | Plus |
| 2R | 25286936 | 2R | 21768974..21769080 | 2041..2147 | 535 | 100 | Plus |
| 2R | 25286936 | 2R | 21766291..21766396 | 502..607 | 530 | 100 | Plus |
| 2R | 25286936 | 2R | 21766823..21766928 | 826..931 | 530 | 100 | Plus |
| 2R | 25286936 | 2R | 21767297..21767402 | 1135..1240 | 530 | 100 | Plus |
| 2R | 25286936 | 2R | 21767790..21767895 | 1450..1555 | 530 | 100 | Plus |
| 2R | 25286936 | 2R | 21769567..21769704 | 2469..2603 | 520 | 93.5 | Plus |
| 2R | 25286936 | 2R | 21769768..21769902 | 2328..2465 | 520 | 93.5 | Plus |
| 2R | 25286936 | 2R | 21768484..21768579 | 1773..1868 | 480 | 100 | Plus |
| 2R | 25286936 | 2R | 21769137..21769226 | 2147..2236 | 450 | 100 | Plus |
| 2R | 25286936 | 2R | 21767468..21767556 | 1240..1328 | 445 | 100 | Plus |
| 2R | 25286936 | 2R | 21766103..21766235 | 1003..1135 | 440 | 88.7 | Plus |
| 2R | 25286936 | 2R | 21766491..21766578 | 607..694 | 440 | 100 | Plus |
| 2R | 25286936 | 2R | 21767109..21767241 | 370..502 | 440 | 88.7 | Plus |
| 2R | 25286936 | 2R | 21768264..21768351 | 1687..1774 | 440 | 100 | Plus |
| 2R | 25286936 | 2R | 21766635..21766767 | 1003..1135 | 425 | 88 | Plus |
| 2R | 25286936 | 2R | 21767109..21767241 | 694..826 | 425 | 88 | Plus |
| 2R | 25286936 | 2R | 21768000..21768084 | 1555..1639 | 425 | 100 | Plus |
| 2R | 25286936 | 2R | 21766291..21766394 | 826..929 | 370 | 90.4 | Plus |
| 2R | 25286936 | 2R | 21766823..21766926 | 502..605 | 370 | 90.4 | Plus |
| 2R | 25286936 | 2R | 21766981..21767053 | 931..1003 | 365 | 100 | Plus |
| 2R | 25286936 | 2R | 21766121..21766235 | 712..826 | 350 | 87 | Plus |
| 2R | 25286936 | 2R | 21766653..21766767 | 388..502 | 350 | 87 | Plus |
| 2R | 25286936 | 2R | 21767300..21767402 | 1453..1555 | 320 | 87.4 | Plus |
| 2R | 25286936 | 2R | 21767793..21767895 | 1138..1240 | 320 | 87.4 | Plus |
| 2R | 25286936 | 2R | 21769371..21769433 | 2264..2326 | 315 | 100 | Plus |
| 2R | 25286936 | 2R | 21765999..21766048 | 321..370 | 250 | 100 | Plus |
| 2R | 25286936 | 2R | 21766823..21766926 | 1135..1238 | 250 | 82.7 | Plus |
| 2R | 25286936 | 2R | 21767297..21767400 | 826..929 | 250 | 82.7 | Plus |
| 2R | 25286936 | 2R | 21768157..21768204 | 1640..1687 | 240 | 100 | Plus |
| 2R | 25286936 | 2R | 21765967..21766046 | 1245..1325 | 235 | 88.9 | Plus |
| 2R | 25286936 | 2R | 21766291..21766396 | 1135..1240 | 215 | 80.2 | Plus |
| 2R | 25286936 | 2R | 21767297..21767402 | 502..607 | 215 | 80.2 | Plus |
| 2R | 25286936 | 2R | 21766989..21767034 | 1248..1293 | 185 | 93.5 | Plus |
| 2R | 25286936 | 2R | 21767476..21767521 | 939..984 | 185 | 93.5 | Plus |
Blast to na_te.dros performed on 2014-11-28 11:19:20 has no hits.
BO31668.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-15 10:36:31 Download gff for
BO31668.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30395-RB | 15..2732 | 17..2736 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:19:43 Download gff for
BO31668.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30395-RB | 51..2768 | 17..2736 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:40:25 Download gff for
BO31668.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30395-RB | 51..2768 | 17..2736 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:40:25 Download gff for
BO31668.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 21766636..21766767 | 695..826 | 100 | -> | Plus |
| 2R | 21766824..21766928 | 827..931 | 100 | -> | Plus |
| 2R | 21766982..21767053 | 932..1003 | 100 | -> | Plus |
| 2R | 21767110..21767241 | 1004..1135 | 100 | -> | Plus |
| 2R | 21767298..21767402 | 1136..1240 | 100 | -> | Plus |
| 2R | 21767469..21767555 | 1241..1327 | 100 | -> | Plus |
| 2R | 21767612..21767734 | 1328..1450 | 100 | -> | Plus |
| 2R | 21767791..21767895 | 1451..1555 | 100 | -> | Plus |
| 2R | 21768001..21768084 | 1556..1639 | 100 | -> | Plus |
| 2R | 21768157..21768204 | 1640..1687 | 100 | -> | Plus |
| 2R | 21768265..21768351 | 1688..1774 | 100 | -> | Plus |
| 2R | 21768486..21768578 | 1775..1867 | 100 | -> | Plus |
| 2R | 21768638..21768670 | 1868..1900 | 100 | -> | Plus |
| 2R | 21768720..21768833 | 1901..2014 | 100 | -> | Plus |
| 2R | 21768894..21768920 | 2015..2041 | 100 | -> | Plus |
| 2R | 21768975..21769079 | 2042..2146 | 100 | -> | Plus |
| 2R | 21769137..21769226 | 2147..2236 | 100 | -> | Plus |
| 2R | 21769289..21769315 | 2237..2263 | 100 | -> | Plus |
| 2R | 21769371..21769433 | 2264..2326 | 100 | -> | Plus |
| 2R | 21769566..21769706 | 2327..2467 | 100 | -> | Plus |
| 2R | 21769767..21769904 | 2468..2605 | 100 | -> | Plus |
| 2R | 21769966..21770094 | 2606..2736 | 98 | | Plus |
| 2R | 21766492..21766578 | 608..694 | 100 | -> | Plus |
| 2R | 21765539..21765685 | 17..163 | 100 | -> | Plus |
| 2R | 21765748..21765906 | 164..322 | 100 | -> | Plus |
| 2R | 21766001..21766048 | 323..370 | 100 | -> | Plus |
| 2R | 21766104..21766235 | 371..502 | 100 | -> | Plus |
| 2R | 21766292..21766396 | 503..607 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:19:43 Download gff for
BO31668.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 17653797..17653901 | 503..607 | 100 | -> | Plus |
| arm_2R | 17653997..17654083 | 608..694 | 100 | -> | Plus |
| arm_2R | 17654141..17654272 | 695..826 | 100 | -> | Plus |
| arm_2R | 17654329..17654433 | 827..931 | 100 | -> | Plus |
| arm_2R | 17654487..17654558 | 932..1003 | 100 | -> | Plus |
| arm_2R | 17654615..17654746 | 1004..1135 | 100 | -> | Plus |
| arm_2R | 17654803..17654907 | 1136..1240 | 100 | -> | Plus |
| arm_2R | 17654974..17655060 | 1241..1327 | 100 | -> | Plus |
| arm_2R | 17655117..17655239 | 1328..1450 | 100 | -> | Plus |
| arm_2R | 17655296..17655400 | 1451..1555 | 100 | -> | Plus |
| arm_2R | 17655506..17655589 | 1556..1639 | 100 | -> | Plus |
| arm_2R | 17655662..17655709 | 1640..1687 | 100 | -> | Plus |
| arm_2R | 17655770..17655856 | 1688..1774 | 100 | -> | Plus |
| arm_2R | 17655991..17656083 | 1775..1867 | 100 | -> | Plus |
| arm_2R | 17656143..17656175 | 1868..1900 | 100 | -> | Plus |
| arm_2R | 17656225..17656338 | 1901..2014 | 100 | -> | Plus |
| arm_2R | 17656399..17656425 | 2015..2041 | 100 | -> | Plus |
| arm_2R | 17656480..17656584 | 2042..2146 | 100 | -> | Plus |
| arm_2R | 17656642..17656731 | 2147..2236 | 100 | -> | Plus |
| arm_2R | 17656794..17656820 | 2237..2263 | 100 | -> | Plus |
| arm_2R | 17656876..17656938 | 2264..2326 | 100 | -> | Plus |
| arm_2R | 17657071..17657211 | 2327..2467 | 100 | -> | Plus |
| arm_2R | 17653506..17653553 | 323..370 | 100 | -> | Plus |
| arm_2R | 17653609..17653740 | 371..502 | 100 | -> | Plus |
| arm_2R | 17657272..17657409 | 2468..2605 | 100 | -> | Plus |
| arm_2R | 17657471..17657599 | 2606..2736 | 98 | | Plus |
| arm_2R | 17653044..17653190 | 17..163 | 100 | -> | Plus |
| arm_2R | 17653253..17653411 | 164..322 | 100 | -> | Plus |
BO31668.pep Sequence
Translation from 16 to 2752
> BO31668.pep
MRILWIAAISFSWQFSDAFYYMPKFLCIPPFVAINGSCLIPTPKEPTILP
CLKNLQNSTVFPENREIVTVSPPNLITEDGATIGESHSKDEKPNLSIKVP
VKEAGAVEGDKTNEDLNPTVPNANKVPTDSSENTLDSEPNDNFVGKPEDS
NQNESNPDIITPSQHANSSIISTNQGQETNESNIPEKGSNTDSKLKPTIS
EDSQVNNIPPKEGAFQGDNTNKDLNPTVPDESNVPTESSENTSDSEFDDN
NIGKPEDSDQNESNPDIVTPSQHENSSLISTNHGQETNESNLPENGSNKG
SKLKLPTPENSQINQTPPEAGAVNQDLNPTVPDANKLPTESSENALDSEF
NGNNVGKPEDSHQNESNPDIITPSKHENSSLISTNPGQETNGIRDPVNGS
NAISTLKPPVSENSQINQIPSEAGEVEGDKANKDLNLDDPNVNKLSSENT
INSGPNNTNISKPEDCDPNESNSNIIAPNKPANSSITSTNPGQEANGIRY
PVNGSIASSILNPNVSKPTKLDGKNFESNLAVGNENKTENITEDPNQNPK
KENTIVSSISENPTMNKTGGLLTENMEGLSSTSSAKIPSTRPTISQPPKK
GIAILPVKRPSRIYSTDDLNPPKFEIPSISGADAGVLPISPSIPDTDKIN
SGILPSGIPIQTPLPVDLNPSKDPSMPEMLPVRDPSIPDTENLIKNTLPP
EGPSKIVLPGDLHTPIIPDTNEVINGLLPSERPNQIPLSGNTSHPNTHSI
TGIGSATKPVVPALPGTDNLTPKIIDPKIHIPESKEPILPKIPETDHLIN
EEDLIGKQQSPKIHIPGAPKINDPKIHIPESKEPILPKIPETDHLINEDL
IRKPQSPKIHIPETPKIIEPKIQIPKDPKMPKLIRPEDLYPKDINIYELL
PKDMFAASFLDH
BO31668.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:33:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30395-PB | 906 | CG30395-PB | 1..906 | 1..906 | 4764 | 100 | Plus |
| CG15040-PA | 1895 | CG15040-PA | 1468..1886 | 129..568 | 242 | 20.4 | Plus |
| CG15040-PA | 1895 | CG15040-PA | 1458..1880 | 109..553 | 238 | 21.8 | Plus |
| Muc68D-PB | 1514 | CG6004-PB | 686..1303 | 68..767 | 214 | 20.6 | Plus |
| CG15040-PA | 1895 | CG15040-PA | 1473..1877 | 74..496 | 211 | 21.1 | Plus |
| Muc68D-PB | 1514 | CG6004-PB | 281..789 | 68..598 | 200 | 21.7 | Plus |
| Muc68D-PB | 1514 | CG6004-PB | 274..734 | 128..586 | 197 | 21.6 | Plus |
| Muc68D-PB | 1514 | CG6004-PB | 350..847 | 69..582 | 194 | 19.5 | Plus |
| tnc-PD | 2819 | CG13648-PD | 271..1009 | 27..691 | 189 | 19.6 | Plus |
| tnc-PC | 2819 | CG13648-PC | 271..1009 | 27..691 | 189 | 19.6 | Plus |
| Muc68D-PB | 1514 | CG6004-PB | 148..635 | 148..586 | 182 | 20.7 | Plus |
| Muc68D-PB | 1514 | CG6004-PB | 853..1320 | 69..533 | 174 | 20.7 | Plus |
| tnc-PD | 2819 | CG13648-PD | 1253..2032 | 68..858 | 172 | 19.9 | Plus |
