Clone BO31685 Report

Search the DGRC for BO31685

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:316
Well:85
Vector:pDNR-Dual
Associated Gene/TranscriptCyp313a4-RA
Protein status:BO31685.pep: Imported from assembly
Sequenced Size:1516

Clone Sequence Records

BO31685.complete Sequence

1516 bp assembled on 2012-04-30

GenBank Submission: KX797204

> BO31685.complete
GAAGTTATCAGTCGACATGCTGACCTGGACGCTGTGGTGTGGACTGCTGT
TCCTGCTCTGGATCTACTTTCTGTGGAGCAGGCGCAGATTTTATCTGCTA
ACGCTAAAGATACCGGGACCACTTGGATATCCCATTTTGGGCATGGCTCA
CTGGCTGATGCGCAGGGAAGATATCCTCAACGCATTCGGCTGCTTTCTCG
ACAAGCACGGTCCGACAATTTTCTCCTGGCTGGGGCCCATTCCCTTTATG
ATTGTGAGTGATCCCCAAGTGGTGCAGGATATCTTCACATCTCCCCACTG
CGTCAACAAGGGCATTATTTACAAGGCAGTGGACGATGGCGCCGGAGTTG
GATTATTCAGCCTGAAGGATCCCCGCTGGAGCATCCATCGGAAGCTGCTG
AATCCCGCCTTCGGCCACAAGGTGCTACTCAGCTTCCTGCCCATTTTCAA
CCGGGAGACGGCCCTTCTGCTCGATCAACTCGAACCACTGCAGGATGACG
GCGAGAAGGATCTCATTCCACTGCTGCAGAGCTTCACCCTGGGAATTGCC
ACCCAAACCACCATGGGCAGCGATGTAAAGGATGAAGAGAGCTTCAGGAG
CAATTCCTTGCTGGGGCGATACCAATGCATCCTGGAAACCATGACAGATA
TGTGCTTCTCTCCGTGGCTCAATAGCCGATTTTGCCGGCAGCTGGCTGGA
AAGGAATCGCACTACTACCAGGCCAAAACTGAGATTCGTCAGTTTATTCG
GAAGATAATTGAGAGAAAGTTGGCCGAGGACGAAATGGGAGCACTACCTT
CCATCCAGTCCAATGATAAAAACCTATTTCTAAATCTGGTCACGGATTTG
ATGAGACGAGGAGTGTTTACCCTGAAGAATGTTGAGGATGAGTCGAATAT
CATCGTTTTTGGAGCTTTTGAGACCACGGCTAATGCAGTGTACTACACCC
TGATGTTGCTGGCGATGTTTCCGGAATACCAGGAGAGGGCCTTTGAGGAA
ATAAAGACGATATTCCCAAACACAGGAGACTTTGATGTATCCTACGCGGA
CACCCAGCAGATGGTGTACCTTGACCTGATCCTCAACGAATCCATGAGAG
TAATACCCCCTGTTCCTGTCGTATCCCGACAAACGTCTCAGGATCTGAAG
CTGTCCAATGGTATAGTGGTTCCCAAAGGGGTCCAGATCGCCATCGACAT
TTATCACATGCACAGAAGCAAAAAGATCTGGGGTCCGGATGCGGAGACCT
TCAACCCAGATCATTTCCTCCCCCACAACATCCAGGACAAGCATCCGTAC
GCCTATATACCTTTTACCAAGGGCATTCGAAATTGCATAGGTTGGAGATA
TGCCTTAATATCGGCGAAAGTTACATTAGCCAAGTTATTGCGGAATTATA
GGTTTAAAACGAGTTTTCCCTTCGAAAATCTATACTTTGTTGAAGATATT
ACGATGAAGTTGAAATCTGTGCCACTGTTGGAGCTCCAAAAGAGAACTGC
AAGCTTTCTAGACCAT

BO31685.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 12:37:04
Subject Length Description Subject Range Query Range Score Percent Strand
Cyp313a4-RA 1485 CG6802-PA 1..1482 17..1498 7410 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:37:05
Subject Length Description Subject Range Query Range Score Percent Strand
Cyp313a4-RA 1651 CG6802-RA 70..1552 16..1498 7415 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 12:37:02
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 12679601..12680190 1342..753 2950 100 Minus
3R 32079331 3R 12680889..12681088 368..169 1000 100 Minus
3R 32079331 3R 12680650..12680836 554..368 935 100 Minus
3R 32079331 3R 12679378..12679538 1498..1338 805 100 Minus
3R 32079331 3R 12681152..12681306 170..16 775 100 Minus
3R 32079331 3R 12680248..12680375 754..627 640 100 Minus
3R 32079331 3R 12680418..12680490 627..555 365 100 Minus
Blast to na_te.dros performed on 2014-11-28 12:37:02 has no hits.

BO31685.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-30 10:04:21 Download gff for BO31685.complete
Subject Subject Range Query Range Percent Splice Strand
Cyp313a4-RA 71..1552 17..1500 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:45:43 Download gff for BO31685.complete
Subject Subject Range Query Range Percent Splice Strand
Cyp313a4-RA 71..1552 17..1500 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:08:00 Download gff for BO31685.complete
Subject Subject Range Query Range Percent Splice Strand
Cyp313a4-RA 71..1552 17..1500 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 13:08:00 Download gff for BO31685.complete
Subject Subject Range Query Range Percent Splice Strand
3R 12681152..12681305 17..170 100   Minus
3R 12680889..12681086 171..368 100 <- Minus
3R 12679376..12679535 1341..1500 98 <- Minus
3R 12679603..12680188 755..1340 100 <- Minus
3R 12680248..12680374 628..754 100 <- Minus
3R 12680418..12680490 555..627 100 <- Minus
3R 12680650..12680835 369..554 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:45:43 Download gff for BO31685.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 8506611..8506808 171..368 100 <- Minus
arm_3R 8506874..8507027 17..170 100   Minus
arm_3R 8505098..8505257 1341..1500 98 <- Minus
arm_3R 8505325..8505910 755..1340 100 <- Minus
arm_3R 8505970..8506096 628..754 100 <- Minus
arm_3R 8506140..8506212 555..627 100 <- Minus
arm_3R 8506372..8506557 369..554 100 <- Minus

BO31685.pep Sequence

Translation from 16 to 1516

> BO31685.pep
MLTWTLWCGLLFLLWIYFLWSRRRFYLLTLKIPGPLGYPILGMAHWLMRR
EDILNAFGCFLDKHGPTIFSWLGPIPFMIVSDPQVVQDIFTSPHCVNKGI
IYKAVDDGAGVGLFSLKDPRWSIHRKLLNPAFGHKVLLSFLPIFNRETAL
LLDQLEPLQDDGEKDLIPLLQSFTLGIATQTTMGSDVKDEESFRSNSLLG
RYQCILETMTDMCFSPWLNSRFCRQLAGKESHYYQAKTEIRQFIRKIIER
KLAEDEMGALPSIQSNDKNLFLNLVTDLMRRGVFTLKNVEDESNIIVFGA
FETTANAVYYTLMLLAMFPEYQERAFEEIKTIFPNTGDFDVSYADTQQMV
YLDLILNESMRVIPPVPVVSRQTSQDLKLSNGIVVPKGVQIAIDIYHMHR
SKKIWGPDAETFNPDHFLPHNIQDKHPYAYIPFTKGIRNCIGWRYALISA
KVTLAKLLRNYRFKTSFPFENLYFVEDITMKLKSVPLLELQKRTASFLDH

BO31685.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:26:42
Subject Length Description Subject Range Query Range Score Percent Strand
Cyp313a4-PA 494 CG6802-PA 1..494 1..494 2615 100 Plus
Cyp313a3-PA 492 CG10093-PA 1..492 1..494 1118 44.3 Plus
Cyp313a1-PA 492 CG3360-PA 1..491 1..493 1085 41.5 Plus
Cyp313a2-PB 493 CG10094-PB 1..492 1..494 1072 41.9 Plus
Cyp313a5-PA 487 CG15807-PA 1..486 1..493 1052 39.1 Plus