Clone BO31704 Report

Search the DGRC for BO31704

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:317
Well:4
Vector:pDNR-Dual
Associated Gene/TranscriptCG17370-RA
Protein status:BO31704.pep: Imported from assembly
Sequenced Size:1285

Clone Sequence Records

BO31704.complete Sequence

1285 bp assembled on 2012-04-25

GenBank Submission: KX799708

> BO31704.complete
GAAGTTATCAGTCGACATGTCGCACGGTGGAGCCGGTGGCGGTCTGGGAG
CTCAAACTGTTGGAGCCGGCCAACTTGGAGGCGGTGCAGCGGCAGCTGGC
GGTGGAGAATACCGCGAACTCCACTGGACGGTCTCAAGCGTAATGGACTC
GTCTCGGGTCTCTACCTGCCTCATATCGATGCTGCTGATAGTCTACGGCA
GCTTTCGCTCCTTAAACATCGAGCAGGAGGCCCGCGAGCGGGAGCAGAAG
AAGCGAAATGAATCGATGACCAATCTTCTTACCGGCGAGCCCGTCGAGAA
GGAACCAACGGATAAATTCGCCACTCTGGACACGATGCATGCCCTCTGTT
TGCCCCTCGGAGCTTCCATCTCACTGCTCATCATGTTCTTCTTCTTCGAC
TCGATGCAGCTGCTCTTCGCCGTCTGCACAGCGATTATAGCCACCGTGGC
GCTGGCCTTTCTGCTGCTGCCCATGTGCCAGTACATCATCAGGCCATGCA
CAGATGGAAAGCGATTCTCCTTCGGATTCTGCGGTCGCTTCACAGCCGCG
GAGCTCTTCAGCTTTACGCTTTCGGTATCGATTGTGTGCATATGGGTGCT
CACTGGCCACTGGCTGCTAATGGATGCAATGGGCATGGGCCTGTGTGTGG
CATTCATAGCGTTTGTGCGTCTGCCCAGCTTGAAGGTGTCCACGCTGCTG
TTGACCGGCCTGCTCATCTACGACGTCTTCTGGGTATTCCTCTCCTCGTA
CATCTTCAGCACCAACGTGATGGTCAAGGTGGCGACGCGACCCGCCGATA
ATCCCGTGGGCATCGTGGCCAGAAAGTTGCATCTGGGTGGCATTGTGCGG
GACACACCAAAGCTGAATCTGCCCGGAAAGCTTGTTTTTCCCAGCCTGCA
CAATACCGGTCACTTCTCTATGCTGGGCCTGGGTGATGTGGTGATGCCGG
GCCTGTTGCTGTGCTTCGTCTTGCGGTATGATGCGTACAAGAAGGCGCAG
GGCGTCACATCGGATCCCACATTGTCACCACCCAGAGGAGTTGGCTCCCG
GTTGACATACTTTCATTGTTCCTTATTGGGTTATTTCTTGGGCCTGCTAA
CGGCGACGGTCAGCTCCGAGGTCTTTAAGGCGGCCCAGCCGGCGCTGCTG
TATCTAGTGCCCTTTACGTTATTGCCGCTCTTGCTGATGGCGTATCTGAA
GGGCGACCTGCGGCGCATGTGGAGCGAGCCGTTTATCGCGCAACAACCAT
CAAAACAACTGGAAGTCGCAAGCTTTCTAGACCAT

BO31704.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 05:37:16
Subject Length Description Subject Range Query Range Score Percent Strand
SppL-RF 1254 CG17370-PF 1..1251 17..1267 6255 100 Plus
SppL-RC 1254 CG17370-PC 1..1251 17..1267 6255 100 Plus
SppL-RB 1254 CG17370-PB 1..1251 17..1267 6255 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:37:17
Subject Length Description Subject Range Query Range Score Percent Strand
SppL-RF 2561 CG17370-RF 602..1853 16..1267 6260 100 Plus
SppL-RC 2164 CG17370-RC 205..1456 16..1267 6260 100 Plus
SppL-RB 2101 CG17370-RB 649..1900 16..1267 6260 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 05:37:14
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 25886565..25887019 626..1080 2275 100 Plus
3R 32079331 3R 25885537..25885829 16..308 1465 100 Plus
3R 32079331 3R 25886307..25886498 435..626 960 100 Plus
3R 32079331 3R 25885895..25886020 309..434 630 100 Plus
3R 32079331 3R 25887110..25887232 1080..1202 615 100 Plus
3R 32079331 3R 25887296..25887363 1200..1267 340 100 Plus
Blast to na_te.dros performed on 2014-11-28 05:37:15 has no hits.

BO31704.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-25 14:07:04 Download gff for BO31704.complete
Subject Subject Range Query Range Percent Splice Strand
CG17370-RC 204..1454 17..1269 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:40:03 Download gff for BO31704.complete
Subject Subject Range Query Range Percent Splice Strand
SppL-RA 449..1699 17..1269 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 06:15:00 Download gff for BO31704.complete
Subject Subject Range Query Range Percent Splice Strand
SppL-RB 650..1900 17..1269 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 06:15:00 Download gff for BO31704.complete
Subject Subject Range Query Range Percent Splice Strand
3R 25887298..25887363 1202..1269 97   Plus
3R 25886566..25887019 627..1080 100 -> Plus
3R 25885538..25885829 17..308 100 -> Plus
3R 25885895..25886020 309..434 100 -> Plus
3R 25886307..25886498 435..626 100 -> Plus
3R 25887111..25887231 1081..1201 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:40:03 Download gff for BO31704.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 21713020..21713085 1202..1269 97   Plus
arm_3R 21711260..21711551 17..308 100 -> Plus
arm_3R 21711617..21711742 309..434 100 -> Plus
arm_3R 21712029..21712220 435..626 100 -> Plus
arm_3R 21712288..21712741 627..1080 100 -> Plus
arm_3R 21712833..21712953 1081..1201 100 -> Plus

BO31704.pep Sequence

Translation from 16 to 1285

> BO31704.pep
MSHGGAGGGLGAQTVGAGQLGGGAAAAGGGEYRELHWTVSSVMDSSRVST
CLISMLLIVYGSFRSLNIEQEAREREQKKRNESMTNLLTGEPVEKEPTDK
FATLDTMHALCLPLGASISLLIMFFFFDSMQLLFAVCTAIIATVALAFLL
LPMCQYIIRPCTDGKRFSFGFCGRFTAAELFSFTLSVSIVCIWVLTGHWL
LMDAMGMGLCVAFIAFVRLPSLKVSTLLLTGLLIYDVFWVFLSSYIFSTN
VMVKVATRPADNPVGIVARKLHLGGIVRDTPKLNLPGKLVFPSLHNTGHF
SMLGLGDVVMPGLLLCFVLRYDAYKKAQGVTSDPTLSPPRGVGSRLTYFH
CSLLGYFLGLLTATVSSEVFKAAQPALLYLVPFTLLPLLLMAYLKGDLRR
MWSEPFIAQQPSKQLEVASFLDH

BO31704.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:21:08
Subject Length Description Subject Range Query Range Score Percent Strand
SppL-PF 417 CG17370-PF 1..417 1..417 2148 100 Plus
SppL-PC 417 CG17370-PC 1..417 1..417 2148 100 Plus
SppL-PB 417 CG17370-PB 1..417 1..417 2148 100 Plus
SppL-PA 417 CG17370-PA 1..417 1..417 2148 100 Plus
SppL-PE 422 CG17370-PE 1..422 1..417 2127 98.6 Plus