BO31708.complete Sequence
1168 bp assembled on 2012-04-25
GenBank Submission: KX798344
> BO31708.complete
GAAGTTATCAGTCGACATGGCATTGTCGAAGAAACTAAGCAGCAAAATCT
ATCGGAGCAGCAGACAAAAAAAAATGTTAACGTTTTGGGAAAAGACATCA
AAAAAATCAGCAGATATACCAAACCAAATCAGCGGAGCACTTGCATCAAG
TAACTTAGCTATCTGCGCCTGTCTAATAGTAATCTTCATTGCATCTGTAA
CCACGGCCAAAACACCGGATCAGGAAGCTATCCATCACAAAAATGACGAA
TTTCCGGAAGAGGAAAGCGACATGGTGATGGAGCCAAATGATTTTTCGCC
AATCACTGTACTAAAGTCACATGAACAACACTTTCATATGCCGCCCACAA
CGCATCTTCAGCCACAAGTTCAAGCTAGAATTCATCCTAGAGTTCAACCC
AGAAAATTTCAATCCGCACTCCAACAAAATGCTGAGGAGCCATTCCGGCC
CATTGCTAATCCAAATACGAAGATTGTTGGCGATTCTCATACGCAGGCTG
CCCAAAATTTCTACCCACCTTTCTACCATGAGGCTCCTCCACTGGGCCAT
TCCAGACCTTACTTTGGTCACGGCCCGCCTGTATCGGAAACAACTCCTTT
ATCCTTACCCCTTCCGCTCTTGACAACTCAACAGCAACAGCCAGCAACTC
AGCAGCGGACTTTCGATGCCAGTATACTTGGAAGTGGGGATTTTGGTGTC
CTTAGAGGTGGAACCTTCTATCCGGAGGAGGAAATGCCCTATCACCCCGA
AGATAACAGTGATTACATCTATGGAGATGCTAACAATGGACACGGTCGAC
CATCTGAGGGTTTTGTTCAAAAGTACACGTATCCAGAGGAGCAGTTCGCT
AATTTTCGCGATTTTGCCGATATCAACACGCCCGCCGATACGGCGTTTTC
GCAATTTGTGGTGGTGTATGCGGCCAAAAATGCCTCTGTACCACACTCTC
ATCCGCATCCTAAAAACATATTTGAACAGTTAGAGCAGCTGGACAGGGAA
AAAGAGCTGAAAAATACCGAATTTGAGAACAAAACTTCTTCGAAAATAAA
GTCGAAATTGTCTAATACAAAGTTGCAAAAAAAATACCGAAAAAAAACGG
CCCCCAAAGTCCAGGATCCTCAAGAAATAGAGCCTTTACTAGCTCTAAGT
GCAAGCTTTCTAGACCAT
BO31708.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 05:37:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32816-RF | 1137 | CG32816-PF | 1..1134 | 17..1150 | 5670 | 100 | Plus |
| CG32816-RE | 1137 | CG32816-PE | 1..1134 | 17..1150 | 5670 | 100 | Plus |
| CG32816-RA | 1137 | CG32816-PA | 1..1134 | 17..1150 | 5670 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:37:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32816-RF | 1834 | CG32816-RF | 253..1386 | 17..1150 | 5670 | 100 | Plus |
| CG32816-RE | 1730 | CG32816-RE | 149..1282 | 17..1150 | 5670 | 100 | Plus |
| CG32816-RA | 1821 | CG32816-RA | 240..1373 | 17..1150 | 5670 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 05:37:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 317024..317929 | 1150..245 | 4530 | 100 | Minus |
| X | 23542271 | X | 333565..333793 | 245..17 | 1145 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 05:37:51 has no hits.
BO31708.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-25 14:07:05 Download gff for
BO31708.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32816-RA | 238..1371 | 17..1152 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:40:09 Download gff for
BO31708.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32816-RB | 224..1357 | 17..1152 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 06:15:10 Download gff for
BO31708.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32816-RA | 240..1373 | 17..1152 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 06:15:10 Download gff for
BO31708.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 317022..317928 | 246..1152 | 99 | <- | Minus |
| X | 333565..333793 | 17..245 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:40:09 Download gff for
BO31708.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 211055..211961 | 246..1152 | 99 | <- | Minus |
| arm_X | 227598..227826 | 17..245 | 100 | | Minus |
BO31708.pep Sequence
Translation from 16 to 1168
> BO31708.pep
MALSKKLSSKIYRSSRQKKMLTFWEKTSKKSADIPNQISGALASSNLAIC
ACLIVIFIASVTTAKTPDQEAIHHKNDEFPEEESDMVMEPNDFSPITVLK
SHEQHFHMPPTTHLQPQVQARIHPRVQPRKFQSALQQNAEEPFRPIANPN
TKIVGDSHTQAAQNFYPPFYHEAPPLGHSRPYFGHGPPVSETTPLSLPLP
LLTTQQQQPATQQRTFDASILGSGDFGVLRGGTFYPEEEMPYHPEDNSDY
IYGDANNGHGRPSEGFVQKYTYPEEQFANFRDFADINTPADTAFSQFVVV
YAAKNASVPHSHPHPKNIFEQLEQLDREKELKNTEFENKTSSKIKSKLSN
TKLQKKYRKKTAPKVQDPQEIEPLLALSASFLDH
BO31708.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:21:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32816-PF | 378 | CG32816-PF | 1..378 | 1..378 | 2000 | 100 | Plus |
| CG32816-PE | 378 | CG32816-PE | 1..378 | 1..378 | 2000 | 100 | Plus |
| CG32816-PA | 378 | CG32816-PA | 1..378 | 1..378 | 2000 | 100 | Plus |
| CG32816-PB | 378 | CG32816-PB | 1..378 | 1..378 | 2000 | 100 | Plus |
| CG32816-PD | 293 | CG32816-PD | 1..293 | 86..378 | 1573 | 100 | Plus |
