BO31709.complete Sequence
967 bp assembled on 2012-04-25
GenBank Submission: KX797085
> BO31709.complete
GAAGTTATCAGTCGACATGTTCATCAAGTTGCTTCTAATTAGCCAGCTGC
TGGCGCTGAGTTACGCTCAGTTGTCGCTCGACGAGGCTAAAAAGCAAATC
GATGCCTCGCTTTACAGCGAAGAGGAGACTACCGATGATACGCATCTGCC
GGAGCCCCACCTGCCCCCCCAATATCAGCCTCATCATCCCCACAAGAAGG
TGACCACCACCACTCCCGAGCCGGAAACCACAACTCCAAAGCCAGAAACC
ACCACGAAGCCCGCAATAGAGCAGGAGGGTGAGGCCACCGCTGCTCCCGA
TGACGGACTGGGTCAACTGGATGATGGCTTGCAACAAAACAATGATGGAT
CTGCGCTTCCAGAGTCCACCACTCCGGAACCGGAAACCACGACCCCTACG
ACGACCACCACCACAACGCCAAAGCCCCATAAGCATGAGCCCCACTTTCA
TCCCCATTCTTATCCGCATCCTCACCCCTATCCCTACCCCATTCAGTATC
CCTACCCCCATCCAGGAGTGATATTCTCTGCCGCGGGACCTAAGCTTACT
CCTCCATCGACCACACCGCCCACTGCCAAAGATGCGGACAAGGAATCGCC
GGAGCTGTCTGGATATCCCTCCTATCCGACCTTCAGATCACCGTACTCGC
CCTACCAACCCCAGGTGTTCCCTCAGCCTCGTAACTGGCCCAGCTTCCCA
GGATACGGACCTCCCAGTCCCGGTTTCGGATACCCCCACAACCACAATCA
CGATCACGAAGAAGACTCCGGCGAAGATAAGCCCAAGGACAAGTCTGGTG
AAAAGGATAAGGACGAGGATGTGGCTCTGAAGCCACCAGGATTTAGCTAC
CCGCAGGTCTATTTGATTCCCCGAAGACCAGTGATCTCTGTGCCCAGCTT
TCCGCGTCCAGGAGGCGGATATGGTTCGCCCTACGGCTACGGACTCTACG
CAAGCTTTCTAGACCAT
BO31709.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 05:38:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG16772-RB | 936 | CG16772-PB | 1..933 | 17..949 | 4665 | 100 | Plus |
| CG16772-RA | 936 | CG16772-PA | 1..933 | 17..949 | 4665 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:38:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG16772-RB | 1030 | CG16772-RB | 47..979 | 17..949 | 4665 | 100 | Plus |
| CG16772-RA | 1095 | CG16772-RA | 47..979 | 17..949 | 4665 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 05:37:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 19962824..19963728 | 45..949 | 4525 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 05:37:59 has no hits.
BO31709.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-25 14:07:06 Download gff for
BO31709.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16772-RA | 53..980 | 22..951 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:40:13 Download gff for
BO31709.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16772-RA | 52..979 | 22..951 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 06:15:14 Download gff for
BO31709.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16772-RA | 52..979 | 22..951 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 06:15:14 Download gff for
BO31709.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 19962730..19962754 | 22..46 | 100 | -> | Plus |
| 2L | 19962826..19963728 | 47..951 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:40:13 Download gff for
BO31709.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 19962730..19962754 | 22..46 | 100 | -> | Plus |
| arm_2L | 19962826..19963728 | 47..951 | 99 | | Plus |
BO31709.pep Sequence
Translation from 16 to 967
> BO31709.pep
MFIKLLLISQLLALSYAQLSLDEAKKQIDASLYSEEETTDDTHLPEPHLP
PQYQPHHPHKKVTTTTPEPETTTPKPETTTKPAIEQEGEATAAPDDGLGQ
LDDGLQQNNDGSALPESTTPEPETTTPTTTTTTTPKPHKHEPHFHPHSYP
HPHPYPYPIQYPYPHPGVIFSAAGPKLTPPSTTPPTAKDADKESPELSGY
PSYPTFRSPYSPYQPQVFPQPRNWPSFPGYGPPSPGFGYPHNHNHDHEED
SGEDKPKDKSGEKDKDEDVALKPPGFSYPQVYLIPRRPVISVPSFPRPGG
GYGSPYGYGLYASFLDH
BO31709.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:21:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG16772-PB | 311 | CG16772-PB | 1..311 | 1..311 | 1747 | 100 | Plus |
| CG16772-PA | 311 | CG16772-PA | 1..311 | 1..311 | 1747 | 100 | Plus |
| dalao-PA | 749 | CG7055-PA | 401..713 | 45..307 | 160 | 25.2 | Plus |
| CG15021-PA | 420 | CG15021-PA | 44..242 | 94..305 | 157 | 28.6 | Plus |
