Clone BO31724 Report

Search the DGRC for BO31724

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:317
Well:24
Vector:pDNR-Dual
Associated Gene/Transcriptexo84-RA
Protein status:BO31724.pep: Imported from assembly
Sequenced Size:2047

Clone Sequence Records

BO31724.complete Sequence

2047 bp assembled on 2012-05-15

GenBank Submission: KX795089

> BO31724.complete
GAAGTTATCAGTCGACATGAAGGAGTTCGACGATTTTAATTTTAGCGTTG
AGAAATATACCAAGGACCTGACACGAGAATGTGTGGGTGGCAGCGATTTG
CAGCAGCGAAAAAAGGAAATCGAGGCCTACAACGAAACGACGGCAGCAAC
GCTCAAGCAAACATGCAAAAAGAACTATATGGAGTTTATACAGACGGCCA
AGGAGATATCACATCTCGAGTCGGAAATGTATCAACTGTCGCACATTCTG
ATTGAGCAGCGCAATATTCTGGCCACCATGACGGATGGCAAGACTTCCAG
TCACCTGAAGGCAGAGAGTTTGGAGGCGGAGAGCACTACGGCGACGGAGG
ATCTGGAGAATAGCCATGCCACGCGGGCGGTCAAGGAAATGGTCCAGGGC
TTCAATGGCAATCTGGAAGGCAAGACCTTCCTCAACGAGGGAGCTCTAAT
CGAGTTGGACAGTAATGATTATCGACCCATTCAAAGGGTCTTCTTTTTCC
TCTTCAACGATGTACTGATTGTCTGCAAAGTGAAGCATGATAAGCGCTTG
GATTTCCTCACCGAGTACGACCCCAAGAAAATAGCCGTGATTAACATTAA
GGACTTGGATGGCGTTAAGAATGCCATTAATATCATTACTCCAGATGGTT
CCAAGATCTATCAAAGCATCACGGCTGCTGGGAAGACGGAGTGGATAGAG
AAGCTCGAAGAGGCCTTCCGCTTTGACCAGCAAAAGAAACCAAAAAAGGG
CCAGGCGCCACAGCCTCCAACTCGGGCCAAACAGCAGTCAAAAGCTTCGA
CTCCGGAGAAGGAAACCACACCCCAGAGTCCCGGACAGCCCAAATCCCTG
GAGGATGAGACGCCCGAGTGGCTAAGCACGGCCAGTGAAGAGATTCAGAC
CCTGGTGGCCCAACGGCATTTCGAGGATGCCCAGGAGCTGATAAAGCGAA
CCCAGGACTTCTTGCGAAACGAGAACCGAAAGAAGTTGCCGCTAGCGGAC
GCCATTGAAACCAAGGTGAAGCAGCAGGAGCTGAAGCTGATCAATGTGCT
GCTCAAGGAGTTGTCCAACAGTCACAATCGCAATCTGCAGATCGCTCTGA
GAGCAGCCAAGCGGCCTCTGAAGATTCTCGTAGAGATGGGTCGCTATCGG
CAGGCGAGTGCCACTCTGCTGAAGGTCTGCGCCGTCAGTTTGCGGGTGGC
GCAACGGGAGGCGCGCAGGAATAATGCGGATATATCGGAACTCTTCTTTT
GTGACCTGACGCAGGTGGCCTGTGATTTTCTCACCGCCTTTGAGAAGCAA
CCGGCGTGCGTTAGCGCGCTCGTGGTTTGGTGCAATGCGGAGCTGCAATA
TTTTGCCAGCCAACTGATAAAGCATTACCTGACCAAGGGAACCTCCCTGG
AGTCAGTGGCCAAATGTGTGGAGCGAGTGCGCAAGCCCTCGACAAAGCTC
ACAGAGATCGGGCTGGACATTAGTTATCATTTGGAAGGTCTGTTGCGCAC
TACACTCGAGTCGCTCATAGAGGAATCCAAGGAGCGACTGCTGGACTCCG
TGGGTCGCACCGAGGAGAGCTGGCAGCCGTACAATTTGCAGACCAAGTCG
AACCTGAAGCGTCTGCTCCTGGAGCTCGATGTCTTGGGTATCGATGTGCG
AGCCCAGGCGACGGGCGACACATGGATTAATCTCACCCAGTCGACAGTGG
TTTTCATCAGACACTTCCTGCAGCTCACCGAGTACTGCGGCTGTCTGGCC
AAGTGCGAAACCCTGCTGCAGAGCCTGGAACTGCTTCTTAAGGAGCTGTT
CATTGCCCAGCATTCGTTGAAACCGCCCAGCGACATGGCCGTGGATCCCA
ACTTTGTAATGAAGAACAAGATTTTTCTGGTGGACAACCTGCTGCCCATC
GCCATCGACAAGTTTCGACAGATTTCTGGACGCCAGTGCGAGGGATTGCG
CGAGTTGCACACGAAAATGTCCCGCCAGCAAGGTGCTCCAGTGCCGCGCC
AGCGCAGCGTCTACACCACAGATGTGTTTGCAAGCTTTCTAGACCAT

BO31724.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:00:08
Subject Length Description Subject Range Query Range Score Percent Strand
Exo84-RA 2016 CG6095-PA 1..2013 17..2029 10050 100 Plus
Exo84-RB 2019 CG6095-PB 1..2016 17..2029 9985 99.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:00:09
Subject Length Description Subject Range Query Range Score Percent Strand
Exo84-RA 2243 CG6095-RA 28..2041 16..2029 10055 100 Plus
Exo84-RB 2246 CG6095-RB 28..2044 16..2029 9990 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:00:06
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 26050760..26051532 1316..544 3850 99.9 Minus
3R 32079331 3R 26050171..26050701 1846..1316 2655 100 Minus
3R 32079331 3R 26051586..26051917 544..213 1660 100 Minus
3R 32079331 3R 26049933..26050115 2029..1847 915 100 Minus
3R 32079331 3R 26051974..26052129 212..57 780 100 Minus
3R 32079331 3R 26052190..26052230 56..16 205 100 Minus
Blast to na_te.dros performed on 2014-11-28 13:00:07 has no hits.

BO31724.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-15 10:36:01 Download gff for BO31724.complete
Subject Subject Range Query Range Percent Splice Strand
exo84-RA 29..2041 17..2031 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:49:54 Download gff for BO31724.complete
Subject Subject Range Query Range Percent Splice Strand
exo84-RA 29..2041 17..2031 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:19:01 Download gff for BO31724.complete
Subject Subject Range Query Range Percent Splice Strand
Exo84-RA 29..2041 17..2031 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:19:01 Download gff for BO31724.complete
Subject Subject Range Query Range Percent Splice Strand
3R 26049931..26050115 1847..2031 98 <- Minus
3R 26050171..26050700 1317..1846 100 <- Minus
3R 26050760..26051532 544..1316 99 <- Minus
3R 26051587..26051917 213..543 100 <- Minus
3R 26051974..26052129 57..212 100 <- Minus
3R 26052190..26052229 17..56 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:49:54 Download gff for BO31724.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 21876482..21877254 544..1316 99 <- Minus
arm_3R 21875653..21875837 1847..2031 98 <- Minus
arm_3R 21875893..21876422 1317..1846 100 <- Minus
arm_3R 21877309..21877639 213..543 100 <- Minus
arm_3R 21877696..21877851 57..212 100 <- Minus
arm_3R 21877912..21877951 17..56 100   Minus

BO31724.pep Sequence

Translation from 16 to 2047

> BO31724.pep
MKEFDDFNFSVEKYTKDLTRECVGGSDLQQRKKEIEAYNETTAATLKQTC
KKNYMEFIQTAKEISHLESEMYQLSHILIEQRNILATMTDGKTSSHLKAE
SLEAESTTATEDLENSHATRAVKEMVQGFNGNLEGKTFLNEGALIELDSN
DYRPIQRVFFFLFNDVLIVCKVKHDKRLDFLTEYDPKKIAVINIKDLDGV
KNAINIITPDGSKIYQSITAAGKTEWIEKLEEAFRFDQQKKPKKGQAPQP
PTRAKQQSKASTPEKETTPQSPGQPKSLEDETPEWLSTASEEIQTLVAQR
HFEDAQELIKRTQDFLRNENRKKLPLADAIETKVKQQELKLINVLLKELS
NSHNRNLQIALRAAKRPLKILVEMGRYRQASATLLKVCAVSLRVAQREAR
RNNADISELFFCDLTQVACDFLTAFEKQPACVSALVVWCNAELQYFASQL
IKHYLTKGTSLESVAKCVERVRKPSTKLTEIGLDISYHLEGLLRTTLESL
IEESKERLLDSVGRTEESWQPYNLQTKSNLKRLLLELDVLGIDVRAQATG
DTWINLTQSTVVFIRHFLQLTEYCGCLAKCETLLQSLELLLKELFIAQHS
LKPPSDMAVDPNFVMKNKIFLVDNLLPIAIDKFRQISGRQCEGLRELHTK
MSRQQGAPVPRQRSVYTTDVFASFLDH

BO31724.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:30:22
Subject Length Description Subject Range Query Range Score Percent Strand
Exo84-PA 671 CG6095-PA 1..671 1..671 3417 100 Plus
Exo84-PB 672 CG6095-PB 1..672 1..671 3398 99.7 Plus