Clone BO31734 Report

Search the DGRC for BO31734

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:317
Well:34
Vector:pDNR-Dual
Associated Gene/Transcriptmip120-RA
Protein status:BO31734.pep: Imported from assembly
Sequenced Size:2884

Clone Sequence Records

BO31734.complete Sequence

2884 bp assembled on 2012-05-15

GenBank Submission: KX798601

> BO31734.complete
GAAGTTATCAGTCGACATGGACACGAGTGGCGGAAATTTGGATTCCCTAG
ACGACACGGAACCATTGCCGGAGCTGAGTTTTGAAGACTTTTTGGAGCCA
ACGTCGGAGAAGAGTTCCCAGCACATGGAAATCGAAGCTCTGGACTCAGA
GGAAGACAATATCGGCGGTGAAGATCTGGCCGATCCGGCCAACGATTCCC
TGAACACGCCGCAGTTTAAGAAGAACGTGGTCCACATACTGGAGGACAAG
AGGTTAAACTCGTCCGGACTAACCGTTTTGAAGTCGCACGCCATTAAGAT
GGTGACTGCCGGAGGTACTCCTCCGGCCAAGGCGCAAGTTACAGACGTAA
AGATACTAAACAAATTGAAACCAATACCCAGCAGTACGCTAAAGATCGGT
AGCACGACCATAGCGACCAAATCCACACCGGGCAGCATAACCAAGACTTT
GGGCAACTTGACCCAGATTAGGACGAAAGATGGCCAAGTCATCTTTGTCC
AGAAGTCTGTTCCTGGAACACAAAGCAGCACTGCGGTGACAGGGTCACCA
AGCGGTGGAATAAGACGCCTCGTGGCGCCTTCTGGTATCCAGAAGGCAGT
GCTTTCTAAGGGCGTGACCATGGCAAGCACGGGTCTGGTCAAGGCGGCTG
TTCCTGCCAAAGCAAGCACCTCGGTACCCGGCTCAGCCATAACCTTAAAG
GGCATCCAACCGCTGGCCGGAGGCACTGCGAAGGCGTCGACTTCCAGCAC
GACGGCAACCACATCCCCATCTTTGGCACAGCCCAACAAAATTCAGGTGG
TGCGCACTGCCGATGGCAAAATTATCAAGATCAATCAGGCTGGTCCCTCA
CTGCTGGTGAACGCCAAACAGGGAACTGGGACCACAGTCACACCAGGAGG
TTCTGCCGCCACTTCTGTCAAACTATCTCCCTCCACGGGAAATGTGGTGC
TCAACAAGCCCGTTGGCCAGGTAGTGGTGAGAACAGAAACTCCTGTAAAA
ACGGCGACGGGCTCCGTTGCCAGTGCATCCGCAACACCGGGCAAGATGTT
GGTTCAAAGTGGCGGCAAACAGATTCTTGTATCCAACAAGAACATCATTA
AGCTGTCGCCGAATGCGAGTGCCACCAGTTCGACAACCCACACGACGGGC
GGACAGACACCTTCCACCTCGAGCGGATTGCACGCTATTCAGCTGCCTGG
CAAGGGAGGAATACAATATGTACGTGTCCTGAACAACAATAAGAGTGCCG
CCGGAACAAGTGCAACAGCCTCAATCCCGAAAACAGTGCAAACTCAGAAG
ATCACTGTGGTGCGGCCACCGGCTGCTACTGGTGTTCCTGCCACATCTAC
TACAACATCCGCAGCAGCAGCTTCACCTGCAGCCGCATCGAAGGCAAACC
TTGCCATGGGCAACACTAACAAGATTGTAATGCGATCAATGGGTGGCAGC
ATTGTGCCGCTGCCTTCCGTGCAGACGTTGGTCTCAAAGCGTGCGCTGGG
CGCCATCTCCAACGCTTCAAAACCAGCCAGTGCGGCGAGCAGCAGCGCCA
CGCCGAGTGCCAGCCAGGAGTTGCCACGCAAACACCGTCTTACTGATCTC
AATGTGCAGCTAAAGCAATCGGCCTCGGTCAGCAGTGAAGCTAGCGACAG
CAGCGATGCGGGTCCTGAGGCCAAAAAGCCGCGTTACGTTATTACCATGC
AGCAAGGATCACAGAAGGCAGCTTCCCAGCCAGTTCAGAAACTAATTAAT
CGGACAGCGAATGTACAGCGTGTGGTGTCTAGCAGTACAAGTCCCAGTTC
CAACTCCACAAAGAAAATCTACAACTATGTTCAACCGACTGGAAGCAATG
GGGCCAAGTACATGATCTGTAACTCGGGTGTGCCCCAATCATCGACGAGT
GCCATGCGACGGGGATACACTGGATATGTGGAAAACAAGACGCGACGCCC
GCCACCCATTTCCCCGCAACAGCACCGCTTTAAGCAGATGGGTCCCCAGC
AGCAGTCCAAGCACCAGCAACTTCAAGCGCAGGCCAAGCAACGGATTAGA
CAGCAGCAACTGCCTACCGAACAATCGACGCCGATCAAGGTCGAGCCAAA
GTTGCCGACACTGCCTCCGGGGGTGAAGGCCAATGTACCTGCCAAGCCGC
TCTTTGAAGTCCTAAAACCTCCAGCAACCGCGGCAGCAGCCGGAGCCGTC
GATCCATTGGGCGGCATGACTTCGCGGCGAAAGCACTGCAACTGCAGCAA
GTCGCAGTGTCTAAAGCTTTACTGCGATTGCTTTGCAAACGGCGAGTTTT
GTCAGGACTGCACCTGCAAGGATTGCTTTAACAATCTGGACTACGAAGTG
GAGCGGGAGCGTGCTATTCGCAGCTGCCTCGATCGTAACCCCAGCGCCTT
TAAACCCAAAATTACGGCACCCAATTCAGGTGATATGCGTCTGCATAACA
AAGGTTGCAACTGCAAAAGATCGGGCTGCCTCAAGAACTATTGTGAGTGC
TATGAGGCAAAGATTCCCTGCTCCAGCATATGTAAATGCGTTGGGTGTCG
AAACATGGAAGACCGTCCGGACGTGGACATGGACTCTCTGGACGGATTGA
TGGGTGTCGAGGGTCAGAAAAAGGACAAAGCTAAAAACAAGCAATTGAAC
GAGAATCGCGCAAATATATATTTTACGGACGATGTCATTGAGGCGACCAT
CATGTGCATGATATCGCGGATTGTGATGCACGAGAAACAGAATGTGGCCG
TGGAGGACATGGAGCGCGAGGTTATGGAGGAAATGGGCGAAAGTCTGACA
CAGATCATCGCTTTTGCCAAGGAAAAGCAAGAAACCTCTCAGATAGACGA
GTCCAAGCCTTCTTCTGCAAGCTTTCTAGACCAT

BO31734.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:00:25
Subject Length Description Subject Range Query Range Score Percent Strand
mip120-RA 2853 CG6061-PA 1..2850 17..2866 14250 100 Plus
mip120-RB 2859 CG6061-PB 31..2856 41..2866 14130 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:00:26
Subject Length Description Subject Range Query Range Score Percent Strand
mip120-RA 3475 CG6061-RA 339..3189 16..2866 14255 100 Plus
mip120-RB 3221 CG6061-RB 110..2935 41..2866 14130 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:00:22
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 13509788..13511236 41..1489 7245 100 Plus
2R 25286936 2R 13511291..13512208 1486..2403 4590 100 Plus
2R 25286936 2R 13512503..13512826 2543..2866 1620 100 Plus
2R 25286936 2R 13512297..13512437 2404..2544 705 100 Plus
Blast to na_te.dros performed 2014-11-28 13:00:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2328..2387 1338..1397 147 71.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2439..2518 1344..1424 141 65.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2325..2376 1338..1389 125 71.2 Plus

BO31734.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-15 10:36:03 Download gff for BO31734.complete
Subject Subject Range Query Range Percent Splice Strand
mip120-RA 328..3177 17..2868 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:49:58 Download gff for BO31734.complete
Subject Subject Range Query Range Percent Splice Strand
mip120-RA 340..3189 17..2868 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:19:06 Download gff for BO31734.complete
Subject Subject Range Query Range Percent Splice Strand
mip120-RA 340..3189 17..2868 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:19:06 Download gff for BO31734.complete
Subject Subject Range Query Range Percent Splice Strand
2R 13506769..13506793 17..41 100 -> Plus
2R 13509789..13511236 42..1489 100 -> Plus
2R 13511295..13512208 1490..2403 100 -> Plus
2R 13512297..13512436 2404..2543 100 -> Plus
2R 13512504..13512826 2544..2868 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:49:58 Download gff for BO31734.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 9394274..9394298 17..41 100 -> Plus
arm_2R 9397294..9398741 42..1489 100 -> Plus
arm_2R 9398800..9399713 1490..2403 100 -> Plus
arm_2R 9399802..9399941 2404..2543 100 -> Plus
arm_2R 9400009..9400331 2544..2868 99   Plus

BO31734.pep Sequence

Translation from 16 to 2884

> BO31734.pep
MDTSGGNLDSLDDTEPLPELSFEDFLEPTSEKSSQHMEIEALDSEEDNIG
GEDLADPANDSLNTPQFKKNVVHILEDKRLNSSGLTVLKSHAIKMVTAGG
TPPAKAQVTDVKILNKLKPIPSSTLKIGSTTIATKSTPGSITKTLGNLTQ
IRTKDGQVIFVQKSVPGTQSSTAVTGSPSGGIRRLVAPSGIQKAVLSKGV
TMASTGLVKAAVPAKASTSVPGSAITLKGIQPLAGGTAKASTSSTTATTS
PSLAQPNKIQVVRTADGKIIKINQAGPSLLVNAKQGTGTTVTPGGSAATS
VKLSPSTGNVVLNKPVGQVVVRTETPVKTATGSVASASATPGKMLVQSGG
KQILVSNKNIIKLSPNASATSSTTHTTGGQTPSTSSGLHAIQLPGKGGIQ
YVRVLNNNKSAAGTSATASIPKTVQTQKITVVRPPAATGVPATSTTTSAA
AASPAAASKANLAMGNTNKIVMRSMGGSIVPLPSVQTLVSKRALGAISNA
SKPASAASSSATPSASQELPRKHRLTDLNVQLKQSASVSSEASDSSDAGP
EAKKPRYVITMQQGSQKAASQPVQKLINRTANVQRVVSSSTSPSSNSTKK
IYNYVQPTGSNGAKYMICNSGVPQSSTSAMRRGYTGYVENKTRRPPPISP
QQHRFKQMGPQQQSKHQQLQAQAKQRIRQQQLPTEQSTPIKVEPKLPTLP
PGVKANVPAKPLFEVLKPPATAAAAGAVDPLGGMTSRRKHCNCSKSQCLK
LYCDCFANGEFCQDCTCKDCFNNLDYEVERERAIRSCLDRNPSAFKPKIT
APNSGDMRLHNKGCNCKRSGCLKNYCECYEAKIPCSSICKCVGCRNMEDR
PDVDMDSLDGLMGVEGQKKDKAKNKQLNENRANIYFTDDVIEATIMCMIS
RIVMHEKQNVAVEDMEREVMEEMGESLTQIIAFAKEKQETSQIDESKPSS
ASFLDH

BO31734.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:30:28
Subject Length Description Subject Range Query Range Score Percent Strand
mip120-PA 950 CG6061-PA 1..950 1..950 4813 100 Plus
mip120-PB 952 CG6061-PB 11..952 9..950 4771 100 Plus
Alh-PF 1165 CG1070-PF 131..646 216..724 171 21.3 Plus
Mur2B-PB 1144 CG14796-PB 480..933 121..601 170 19.5 Plus
tomb-PA 243 CG14016-PA 26..72 812..858 167 57.4 Plus