BO31735.complete Sequence
2806 bp assembled on 2012-05-15
GenBank Submission: KX797268
> BO31735.complete
GAAGTTATCAGTCGACATGCTTAGAGCTAGGCGCACTATAAGTATTTTCA
TTGAGGAACAGACGGGCCTTACCCTCACACCTGAAATGCTGTTGTCCACC
TCGGAATCATCGACCCACAGTGCCTCCGAGGTCGCCGGACGACTGCAGGT
CGACGTGCGTACCGGCCTCAAATGGACAGAGGCCAAGTATCGTGCCAAGA
TCATCGGGCATAACGAGCTGCTGCTCGTGGCGGAGGATCCGACATGGAAA
AAGTACATTGAGCAGTTTAGGAACCCGCTAATTCTGCTGCTTCTTGGTTC
TGCTCTGGTGTCCGTAATCATGAAGCAGTTTGACGACGCCGTGAGCATAA
CCATTGCCATCCTAATTGTGGTCACGGTGGCCTTTATCCAGGAGTACCGC
TCCGAGAAGAGTCTGGAGGAGCTTAAGAAGCTGGTGCCCCCTGAATGCCA
CTGCCTGCGGGAAGGTCGTCTAGACACATTCCTGGCACGCGAACTGGTTC
CCGGGGACATAGTGCACCTCAACGTGGGCGACCGGGTGCCGGCCGACGTG
CGTCTTTTCGAAGCTGTGGACCTATCTATCGACGAGAGCAGTTTTACCGG
CGAAACAGAGCCGGCGCGCAAAATTACTGATGTTTTGCTTAACAATACGA
ACGTAAAGGACCACAGCAACATGAAGAACATTGCCTTCATGGGCACTCTG
GTGCGATGTGGCAACGGGAAGGGCATAGTTGTCAGCACTGGGGAGCGCAG
TGAGTTCGGTGAGGTCTTCAAAATGATGCAGGCAGAGGAGGCTCCGAAGA
CGCCACTGCAGAAGTCGATGGACATTCTAGGCGCTCAGTTGAGCTTCTAC
TCCTTCCTGATTATCGGTGTCATCATGCTGCTGGGCTGGCTACAAGGTAA
GCCGCTTTCGGAAATGTTCAATATCAGCGTTTCACTGGCCGTTGCGGCCA
TCCCCGAGGGCCTTCCTATCGTGGTAACTGTGACTCTAGCGCTTGGCGTA
ATGCGGATGGCTAAACGAAATTCAATCGTTAAAAAGCTGCCTACTGTTGA
GACTTTGGGCTGCGTTAACGTTATCTGCTCTGATAAGACCGGAACTTTGA
CCAAGAACGAGATGACGGCCACGATCATCATCACTTCCGACGGATACATG
GCGGACGTTACCGGTGCCGGTTACAATGATCAGGGTGAAATCCACATACG
GCATTGCAACAACGTGGAGATGGCTAAGACCAATATTACAAACCTCCTTG
AAATCGGGGCGGTCTGCAATAACGCTTACATACAAAATGGCACCCTCCTA
GGACAACCCACTGAAGGAGCCCTTGTGGCGGTAGCCATGAAGAACGGAAT
GTACGCCACAGCTGAGAACTACGTTCGCATCCAGGAGTATCCCTTCAGCT
CGGAGCAGAAGATGATGGCTGTAAAGTGCATCCACAAGTACAACAACAAC
AAGGAAGAGATTTTCTTCGCCAAGGGGGCTCTAGAGACCCTGTTACCGCA
GTGCACCAAGTATCAGTTTGGTACCCAGACGGTACCACTTACCAAGCAGA
ACGAGGCAGAGTTCCTAGCCGAGGCGTACGAGATCGGGCGCAAGGGCCTT
CGCGTGTTGGCCCTGGCAAAGGGCCGGTCCATGCAAGATCTGATCTACTG
CGGCCTAGTCGGCATCACTGACCCACCAAGGCCCCTTGTTCGAGAGTCTA
TTGAAATGTTAATGCAGAGCGGAGTGCGTGTTAAAATGGTGACTGGAGAT
GCCCAGGAAACGGCCTTGGCCATTGCGAATCTCATCGGTATCGATACAAT
CCATCACCAGACGCTTTCCGGTCAGGAAATGGATCAAATGAACGAGCACC
AACTGGACAAGGTAGCCAACAACGTGAGCGTATTCTACCGCGTATCGCCA
CGCCACAAACTGGAGATAGTCAAGTCCTTGCAGCGCAGTGGCAACATAGT
CGGCATGACGGGCGACGGGGTGAACGACGGAGTGGCCCTGAAGAAGGCGG
ACATCGGCATAGCCATGGGAAAGAACGGGACAGATGTGTGTAAGGAGGCG
GCTGATATGATCCTGGTCAATGATGATTTCCACACCATAATCGCCGCCAT
CGAGGAGGGCAAGGGCATATTCTACAACATTCGAAACTTCGTGCGCTTTC
AGCTTAGCACATCAATAGCTGCCCTGGCCCTGATTGCCCTGGCCACTCTG
ATGGACATTGCTAACCCGCTAAATGCCATGCAGATTTTGTGGATCAACAT
CATAATGGACGGTCCGCCCGCACAGTCTCTGGGCGTGGAGCCCGTCGACC
ACGATGTGCTCAAACAGAAACCACGGAACGTGAAACAGCCAATGATCACA
AAGTCAGTGGTGGTGAACGTTCTGCTTAGTGCCAGTATAATTGTACTGGG
CACGCTGTGGGTGTTCCAGCGCGAAATGGCCGACGGGACGCTGGGAAAGA
CCAAACGGGACACAACGATGACCTTTACTTGTTTCGTGTTTTTCGACATG
TTTAACGCCCTGTCTTGCCGCTCGCAGACAAAGAGTGTCTTTACCATCGG
ACTCACTACCAATCGAATGTTCTTGCTGGCCGTCGCTTTTTCGATCATTG
GTCAAATGCTCGTTGTCTACTTTCCGCCGCTGCAAATGGTTTTCCAGACG
GAAGCTCTTACGCCGTATGACATATTCTTCCTGGTCTCCCTAACCTCATC
TGTGCTGGTTGTTTCAGAGATAAAGAAATGGTTCGAGCGTACCATGGAGC
GCAAGATGTACAGCACCCGCTCCGAGCTGGATTTTGTAGCAAGCTTTCTA
GACCAT
BO31735.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:01:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| SPoCk-RC | 2775 | CG32451-PC | 1..2772 | 17..2788 | 13845 | 100 | Plus |
| SPoCk-RD | 2994 | CG32451-PD | 258..2991 | 55..2788 | 13640 | 99.9 | Plus |
| SPoCk-RB | 3105 | CG32451-PB | 374..3102 | 60..2788 | 13630 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:01:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| SPoCk-RC | 3716 | CG32451-RC | 194..2965 | 17..2788 | 13845 | 100 | Plus |
| SPoCk-RD | 3742 | CG32451-RD | 258..2991 | 55..2788 | 13640 | 99.9 | Plus |
| SPoCk-RB | 5916 | CG32451-RB | 548..3276 | 60..2788 | 13630 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:01:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 22777108..22778824 | 59..1775 | 8570 | 99.9 | Plus |
| 3L | 28110227 | 3L | 22783788..22784484 | 2092..2788 | 3485 | 100 | Plus |
| 3L | 28110227 | 3L | 22783419..22783735 | 1775..2091 | 1585 | 100 | Plus |
| 3L | 28110227 | 3L | 22775327..22775371 | 17..61 | 225 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 13:01:08 has no hits.
BO31735.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-15 10:36:03 Download gff for
BO31735.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| SPoCk-RC | 189..2960 | 17..2790 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:50:03 Download gff for
BO31735.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| SPoCk-RC | 194..2965 | 17..2790 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:19:24 Download gff for
BO31735.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| SPoCk-RC | 194..2965 | 17..2790 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:19:24 Download gff for
BO31735.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 22775327..22775371 | 17..61 | 100 | -> | Plus |
| 3L | 22777111..22778824 | 62..1775 | 99 | -> | Plus |
| 3L | 22783420..22783735 | 1776..2091 | 100 | -> | Plus |
| 3L | 22783788..22784484 | 2092..2790 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:50:03 Download gff for
BO31735.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 22768427..22768471 | 17..61 | 100 | -> | Plus |
| arm_3L | 22770211..22771924 | 62..1775 | 99 | -> | Plus |
| arm_3L | 22776520..22776835 | 1776..2091 | 100 | -> | Plus |
| arm_3L | 22776888..22777584 | 2092..2790 | 99 | | Plus |
BO31735.pep Sequence
Translation from 16 to 2806
> BO31735.pep
MLRARRTISIFIEEQTGLTLTPEMLLSTSESSTHSASEVAGRLQVDVRTG
LKWTEAKYRAKIIGHNELLLVAEDPTWKKYIEQFRNPLILLLLGSALVSV
IMKQFDDAVSITIAILIVVTVAFIQEYRSEKSLEELKKLVPPECHCLREG
RLDTFLARELVPGDIVHLNVGDRVPADVRLFEAVDLSIDESSFTGETEPA
RKITDVLLNNTNVKDHSNMKNIAFMGTLVRCGNGKGIVVSTGERSEFGEV
FKMMQAEEAPKTPLQKSMDILGAQLSFYSFLIIGVIMLLGWLQGKPLSEM
FNISVSLAVAAIPEGLPIVVTVTLALGVMRMAKRNSIVKKLPTVETLGCV
NVICSDKTGTLTKNEMTATIIITSDGYMADVTGAGYNDQGEIHIRHCNNV
EMAKTNITNLLEIGAVCNNAYIQNGTLLGQPTEGALVAVAMKNGMYATAE
NYVRIQEYPFSSEQKMMAVKCIHKYNNNKEEIFFAKGALETLLPQCTKYQ
FGTQTVPLTKQNEAEFLAEAYEIGRKGLRVLALAKGRSMQDLIYCGLVGI
TDPPRPLVRESIEMLMQSGVRVKMVTGDAQETALAIANLIGIDTIHHQTL
SGQEMDQMNEHQLDKVANNVSVFYRVSPRHKLEIVKSLQRSGNIVGMTGD
GVNDGVALKKADIGIAMGKNGTDVCKEAADMILVNDDFHTIIAAIEEGKG
IFYNIRNFVRFQLSTSIAALALIALATLMDIANPLNAMQILWINIIMDGP
PAQSLGVEPVDHDVLKQKPRNVKQPMITKSVVVNVLLSASIIVLGTLWVF
QREMADGTLGKTKRDTTMTFTCFVFFDMFNALSCRSQTKSVFTIGLTTNR
MFLLAVAFSIIGQMLVVYFPPLQMVFQTEALTPYDIFFLVSLTSSVLVVS
EIKKWFERTMERKMYSTRSELDFVASFLDH
BO31735.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:30:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| SPoCk-PC | 924 | CG32451-PC | 1..924 | 1..924 | 4664 | 100 | Plus |
| SPoCk-PD | 997 | CG32451-PD | 87..997 | 14..924 | 4601 | 99.9 | Plus |
| SPoCk-PB | 1034 | CG32451-PB | 125..1034 | 15..924 | 4596 | 99.9 | Plus |
| SPoCk-PF | 917 | CG32451-PF | 9..917 | 16..924 | 4594 | 100 | Plus |
| SPoCk-PE | 917 | CG32451-PE | 9..917 | 16..924 | 4594 | 100 | Plus |
