BO31736.complete Sequence
664 bp assembled on 2012-04-25
GenBank Submission: KX796653
> BO31736.complete
GAAGTTATCAGTCGACATGTCGGTGGCCGGGCTTCGACAATGTCTGCTGC
TGTGGAGCGTCGACTACTGGAACTTGGAAGTCATGGCGGACAATGTCTTC
AAGTCGCACGATATCGGGCTGCGGGCGCAGAAGAAGATCCTCTCACGCAT
GGCCACAAAAAACATCGCCAAGACCTTCATCGATGGCACGACGGCGTCGC
TGCTGGACAACCTCTACAGGCTCTGCAAGATGCACACGGGGAACAAGGCC
AAGGCGGAGAAGCTGATCAAGAACATCATCAAGATTGTGATCAAGATCGG
TGTGCTCCACCGGAACAATCAGTTCAGCGACGAGGAGCTGCAGAAGGCGG
AGCTCTTTAAGAGAAAGTTTCAAAACACGCAGCTGTCCATCATATCATTC
TACGAAGTGGACTTCACGTTCGACCTGCCGTACCTGCAAAAGTCAATAGC
CGAATCGCAAGTGGCGCTGAAGTCGATTGTGCAGCCGCATCTCACAGAAA
AGTCGCTGGGCCGCATCGACGAGGTGTTCGATTTCTTCGGCGAGGAGGCG
CTGCTGGAGACGGCTTTCCGACCAGATTCCCCCTACCGCGAGGTGATGGG
AAAGATTGTGGCGGACATAAACGCAGCCATGGAAACGGGAGATATCGCAA
GCTTTCTAGACCAT
BO31736.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 05:42:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG4091-RC | 633 | CG4091-PC | 1..630 | 17..646 | 3150 | 100 | Plus |
CG4091-RB | 567 | CG4091-PB | 1..564 | 83..646 | 2820 | 100 | Plus |
CG4091-RA | 567 | CG4091-PA | 1..564 | 83..646 | 2820 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:42:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG4091-RC | 1950 | CG4091-RC | 294..931 | 9..646 | 3160 | 99.7 | Plus |
CG4091-RB | 1857 | CG4091-RB | 271..838 | 79..646 | 2840 | 100 | Plus |
CG4091-RA | 1881 | CG4091-RA | 295..862 | 79..646 | 2840 | 100 | Plus |
CG4091-RB | 1857 | CG4091-RB | 1..62 | 19..80 | 310 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 05:42:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 23700298..23700592 | 373..79 | 1475 | 100 | Minus |
2R | 25286936 | 2R | 23699968..23700247 | 646..367 | 1370 | 99.3 | Minus |
2R | 25286936 | 2R | 23700801..23700871 | 80..10 | 325 | 97.2 | Minus |
Blast to na_te.dros performed on 2014-11-28 05:42:21 has no hits.
BO31736.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-25 14:07:10 Download gff for
BO31736.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4091-RC | 297..926 | 17..648 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:40:29 Download gff for
BO31736.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4091-RC | 302..931 | 17..648 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 06:16:37 Download gff for
BO31736.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4091-RC | 302..931 | 17..648 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 06:16:37 Download gff for
BO31736.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 23699965..23700240 | 374..648 | 99 | <- | Minus |
2R | 23700298..23700590 | 81..373 | 100 | <- | Minus |
2R | 23700801..23700864 | 17..80 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:40:29 Download gff for
BO31736.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 19587488..19587763 | 374..648 | 99 | <- | Minus |
arm_2R | 19587821..19588113 | 81..373 | 100 | <- | Minus |
arm_2R | 19588324..19588387 | 17..80 | 100 | | Minus |
BO31736.pep Sequence
Translation from 16 to 664
> BO31736.pep
MSVAGLRQCLLLWSVDYWNLEVMADNVFKSHDIGLRAQKKILSRMATKNI
AKTFIDGTTASLLDNLYRLCKMHTGNKAKAEKLIKNIIKIVIKIGVLHRN
NQFSDEELQKAELFKRKFQNTQLSIISFYEVDFTFDLPYLQKSIAESQVA
LKSIVQPHLTEKSLGRIDEVFDFFGEEALLETAFRPDSPYREVMGKIVAD
INAAMETGDIASFLDH
BO31736.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:21:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG4091-PC | 210 | CG4091-PC | 1..210 | 1..210 | 1062 | 100 | Plus |
CG4091-PB | 188 | CG4091-PB | 1..188 | 23..210 | 942 | 100 | Plus |
CG4091-PA | 188 | CG4091-PA | 1..188 | 23..210 | 942 | 100 | Plus |