Clone BO31736 Report

Search the DGRC for BO31736

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:317
Well:36
Vector:pDNR-Dual
Associated Gene/TranscriptCG4091-RC
Protein status:BO31736.pep: Imported from assembly
Sequenced Size:664

Clone Sequence Records

BO31736.complete Sequence

664 bp assembled on 2012-04-25

GenBank Submission: KX796653

> BO31736.complete
GAAGTTATCAGTCGACATGTCGGTGGCCGGGCTTCGACAATGTCTGCTGC
TGTGGAGCGTCGACTACTGGAACTTGGAAGTCATGGCGGACAATGTCTTC
AAGTCGCACGATATCGGGCTGCGGGCGCAGAAGAAGATCCTCTCACGCAT
GGCCACAAAAAACATCGCCAAGACCTTCATCGATGGCACGACGGCGTCGC
TGCTGGACAACCTCTACAGGCTCTGCAAGATGCACACGGGGAACAAGGCC
AAGGCGGAGAAGCTGATCAAGAACATCATCAAGATTGTGATCAAGATCGG
TGTGCTCCACCGGAACAATCAGTTCAGCGACGAGGAGCTGCAGAAGGCGG
AGCTCTTTAAGAGAAAGTTTCAAAACACGCAGCTGTCCATCATATCATTC
TACGAAGTGGACTTCACGTTCGACCTGCCGTACCTGCAAAAGTCAATAGC
CGAATCGCAAGTGGCGCTGAAGTCGATTGTGCAGCCGCATCTCACAGAAA
AGTCGCTGGGCCGCATCGACGAGGTGTTCGATTTCTTCGGCGAGGAGGCG
CTGCTGGAGACGGCTTTCCGACCAGATTCCCCCTACCGCGAGGTGATGGG
AAAGATTGTGGCGGACATAAACGCAGCCATGGAAACGGGAGATATCGCAA
GCTTTCTAGACCAT

BO31736.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 05:42:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG4091-RC 633 CG4091-PC 1..630 17..646 3150 100 Plus
CG4091-RB 567 CG4091-PB 1..564 83..646 2820 100 Plus
CG4091-RA 567 CG4091-PA 1..564 83..646 2820 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:42:23
Subject Length Description Subject Range Query Range Score Percent Strand
CG4091-RC 1950 CG4091-RC 294..931 9..646 3160 99.7 Plus
CG4091-RB 1857 CG4091-RB 271..838 79..646 2840 100 Plus
CG4091-RA 1881 CG4091-RA 295..862 79..646 2840 100 Plus
CG4091-RB 1857 CG4091-RB 1..62 19..80 310 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 05:42:19
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 23700298..23700592 373..79 1475 100 Minus
2R 25286936 2R 23699968..23700247 646..367 1370 99.3 Minus
2R 25286936 2R 23700801..23700871 80..10 325 97.2 Minus
Blast to na_te.dros performed on 2014-11-28 05:42:21 has no hits.

BO31736.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-25 14:07:10 Download gff for BO31736.complete
Subject Subject Range Query Range Percent Splice Strand
CG4091-RC 297..926 17..648 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:40:29 Download gff for BO31736.complete
Subject Subject Range Query Range Percent Splice Strand
CG4091-RC 302..931 17..648 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 06:16:37 Download gff for BO31736.complete
Subject Subject Range Query Range Percent Splice Strand
CG4091-RC 302..931 17..648 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 06:16:37 Download gff for BO31736.complete
Subject Subject Range Query Range Percent Splice Strand
2R 23699965..23700240 374..648 99 <- Minus
2R 23700298..23700590 81..373 100 <- Minus
2R 23700801..23700864 17..80 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:40:29 Download gff for BO31736.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 19587488..19587763 374..648 99 <- Minus
arm_2R 19587821..19588113 81..373 100 <- Minus
arm_2R 19588324..19588387 17..80 100   Minus

BO31736.pep Sequence

Translation from 16 to 664

> BO31736.pep
MSVAGLRQCLLLWSVDYWNLEVMADNVFKSHDIGLRAQKKILSRMATKNI
AKTFIDGTTASLLDNLYRLCKMHTGNKAKAEKLIKNIIKIVIKIGVLHRN
NQFSDEELQKAELFKRKFQNTQLSIISFYEVDFTFDLPYLQKSIAESQVA
LKSIVQPHLTEKSLGRIDEVFDFFGEEALLETAFRPDSPYREVMGKIVAD
INAAMETGDIASFLDH

BO31736.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:21:34
Subject Length Description Subject Range Query Range Score Percent Strand
CG4091-PC 210 CG4091-PC 1..210 1..210 1062 100 Plus
CG4091-PB 188 CG4091-PB 1..188 23..210 942 100 Plus
CG4091-PA 188 CG4091-PA 1..188 23..210 942 100 Plus