Clone BO31738 Report

Search the DGRC for BO31738

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:317
Well:38
Vector:pDNR-Dual
Associated Gene/TranscriptPka-R1-RW
Protein status:BO31738.pep: Imported from assembly
Sequenced Size:1000

Clone Sequence Records

BO31738.complete Sequence

1000 bp assembled on 2012-04-25

GenBank Submission: KX794145

> BO31738.complete
GAAGTTATCAGTCGACATGCCTAAGGAACAAGTCAAACTGGATGCCAGTA
GACAGGTAATCAGCCCCGACGACTGCGAAGATCTCAGCCCGATGCCACAA
ACAGCTGCTCCACCGGTTCGCAGGCGAGGCGGAATCTCCGCCGAACCCGT
AACCGAAGAGGATGCCACCAACTATGTTAAGAAGGTGGTGCCCAAGGACT
ACAAGACGATGAATGCCCTGTCCAAGGCGATTGCCAAGAACGTCCTGTTC
GCTCACTTGGACGAGAGCGAGAGATCCGACATATTTGATGCCATGTTCCC
TGTGAATCACATCGCCGGCGAGAATATCATCCAGCAGGGCGATGAAGGCG
ACAACTTCTACGTGATTGATGTGGGAGAGGTCGATGTTTTCGTCAACTCC
GAACTAGTGACCACCATCAGCGAGGGCGGCAGCTTTGGTGAACTGGCCCT
CATCTATGGCACTCCTCGCGCCGCCACCGTGCGCGCCAAAACCGATGTGA
AGCTGTGGGGAATCGACCGCGACTCCTACCGCCGCATTCTGATGGGCTCG
ACCATCCGCAAGCGCAAGATGTACGAGGAGTTCTTATCGCGCGTGTCCAT
TCTGGAGAGCTTGGACAAATGGGAGCGCCTCACAGTGGCCGATTCCCTGG
AGACGTGCTCCTTCGATGACGGTGAGACGATTGTCAAGCAGGGAGCAGCT
GGCGATGACTTCTACATCATCCTCGAGGGCTGTGCGGTGGTGCTGCAGCA
GCGTTCTGAGCAGGGCGAGGATCCCGCCGAGGTGGGCCGTCTGGGTAGCA
GCGATTACTTTGGCGAGATTGCTCTGCTTTTGGACCGACCACGTGCAGCG
ACTGTTGTAGCTCGTGGGCCGCTCAAATGCGTCAAACTGGACCGGGCGAG
ATTTGAACGCGTGTTGGGACCCTGCGCCGACATACTCAAACGCAACATCA
CGCAATACAACAGTTTCGTATCGTTGTCCGTTGCAAGCTTTCTAGACCAT

BO31738.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 05:44:05
Subject Length Description Subject Range Query Range Score Percent Strand
Pka-R1-RW 969 CG42341-PW 1..966 17..982 4830 100 Plus
Pka-R1-RAC 1134 CG42341-PAC 174..1131 25..982 4790 100 Plus
Pka-R1-RAB 1134 CG42341-PAB 174..1131 25..982 4790 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:44:06
Subject Length Description Subject Range Query Range Score Percent Strand
Pka-R1-RW 2426 CG42341-RW 264..1229 17..982 4830 100 Plus
Pka-R1-RAC 3243 CG42341-RC 321..1278 25..982 4790 100 Plus
Pka-R1-RAB 3580 CG42341-RB 658..1615 25..982 4790 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 05:44:03
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 20833283..20833657 386..760 1875 100 Plus
3L 28110227 3L 20832844..20833207 24..387 1820 100 Plus
3L 28110227 3L 20833728..20833869 759..900 710 100 Plus
3L 28110227 3L 20834000..20834083 899..982 420 100 Plus
Blast to na_te.dros performed on 2014-11-28 05:44:04 has no hits.

BO31738.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-25 14:07:11 Download gff for BO31738.complete
Subject Subject Range Query Range Percent Splice Strand
Pka-R1-RW 264..1229 17..984 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:40:34 Download gff for BO31738.complete
Subject Subject Range Query Range Percent Splice Strand
Pka-R1-RW 264..1229 17..984 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 06:17:11 Download gff for BO31738.complete
Subject Subject Range Query Range Percent Splice Strand
Pka-R1-RW 264..1229 17..984 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 06:17:11 Download gff for BO31738.complete
Subject Subject Range Query Range Percent Splice Strand
3L 20834002..20834083 901..984 97   Plus
3L 20832839..20833205 17..385 98 -> Plus
3L 20833283..20833657 386..760 100 -> Plus
3L 20833730..20833869 761..900 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:40:34 Download gff for BO31738.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 20825939..20826305 17..385 98 -> Plus
arm_3L 20826383..20826757 386..760 100 -> Plus
arm_3L 20826830..20826969 761..900 100 -> Plus
arm_3L 20827102..20827183 901..984 97   Plus

BO31738.pep Sequence

Translation from 16 to 1000

> BO31738.pep
MPKEQVKLDASRQVISPDDCEDLSPMPQTAAPPVRRRGGISAEPVTEEDA
TNYVKKVVPKDYKTMNALSKAIAKNVLFAHLDESERSDIFDAMFPVNHIA
GENIIQQGDEGDNFYVIDVGEVDVFVNSELVTTISEGGSFGELALIYGTP
RAATVRAKTDVKLWGIDRDSYRRILMGSTIRKRKMYEEFLSRVSILESLD
KWERLTVADSLETCSFDDGETIVKQGAAGDDFYIILEGCAVVLQQRSEQG
EDPAEVGRLGSSDYFGEIALLLDRPRAATVVARGPLKCVKLDRARFERVL
GPCADILKRNITQYNSFVSLSVASFLDH

BO31738.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:21:39
Subject Length Description Subject Range Query Range Score Percent Strand
Pka-R1-PW 322 CG42341-PW 1..322 1..322 1640 100 Plus
Pka-R1-PAC 377 CG42341-PAC 56..377 1..322 1626 99.1 Plus
Pka-R1-PAB 377 CG42341-PAB 56..377 1..322 1626 99.1 Plus
Pka-R1-PZ 320 CG42341-PZ 2..320 4..322 1623 100 Plus
Pka-R1-PQ 321 CG42341-PQ 1..321 1..322 1623 99.7 Plus