BO31738.complete Sequence
1000 bp assembled on 2012-04-25
GenBank Submission: KX794145
> BO31738.complete
GAAGTTATCAGTCGACATGCCTAAGGAACAAGTCAAACTGGATGCCAGTA
GACAGGTAATCAGCCCCGACGACTGCGAAGATCTCAGCCCGATGCCACAA
ACAGCTGCTCCACCGGTTCGCAGGCGAGGCGGAATCTCCGCCGAACCCGT
AACCGAAGAGGATGCCACCAACTATGTTAAGAAGGTGGTGCCCAAGGACT
ACAAGACGATGAATGCCCTGTCCAAGGCGATTGCCAAGAACGTCCTGTTC
GCTCACTTGGACGAGAGCGAGAGATCCGACATATTTGATGCCATGTTCCC
TGTGAATCACATCGCCGGCGAGAATATCATCCAGCAGGGCGATGAAGGCG
ACAACTTCTACGTGATTGATGTGGGAGAGGTCGATGTTTTCGTCAACTCC
GAACTAGTGACCACCATCAGCGAGGGCGGCAGCTTTGGTGAACTGGCCCT
CATCTATGGCACTCCTCGCGCCGCCACCGTGCGCGCCAAAACCGATGTGA
AGCTGTGGGGAATCGACCGCGACTCCTACCGCCGCATTCTGATGGGCTCG
ACCATCCGCAAGCGCAAGATGTACGAGGAGTTCTTATCGCGCGTGTCCAT
TCTGGAGAGCTTGGACAAATGGGAGCGCCTCACAGTGGCCGATTCCCTGG
AGACGTGCTCCTTCGATGACGGTGAGACGATTGTCAAGCAGGGAGCAGCT
GGCGATGACTTCTACATCATCCTCGAGGGCTGTGCGGTGGTGCTGCAGCA
GCGTTCTGAGCAGGGCGAGGATCCCGCCGAGGTGGGCCGTCTGGGTAGCA
GCGATTACTTTGGCGAGATTGCTCTGCTTTTGGACCGACCACGTGCAGCG
ACTGTTGTAGCTCGTGGGCCGCTCAAATGCGTCAAACTGGACCGGGCGAG
ATTTGAACGCGTGTTGGGACCCTGCGCCGACATACTCAAACGCAACATCA
CGCAATACAACAGTTTCGTATCGTTGTCCGTTGCAAGCTTTCTAGACCAT
BO31738.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 05:44:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Pka-R1-RW | 969 | CG42341-PW | 1..966 | 17..982 | 4830 | 100 | Plus |
Pka-R1-RAC | 1134 | CG42341-PAC | 174..1131 | 25..982 | 4790 | 100 | Plus |
Pka-R1-RAB | 1134 | CG42341-PAB | 174..1131 | 25..982 | 4790 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:44:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Pka-R1-RW | 2426 | CG42341-RW | 264..1229 | 17..982 | 4830 | 100 | Plus |
Pka-R1-RAC | 3243 | CG42341-RC | 321..1278 | 25..982 | 4790 | 100 | Plus |
Pka-R1-RAB | 3580 | CG42341-RB | 658..1615 | 25..982 | 4790 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 05:44:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 20833283..20833657 | 386..760 | 1875 | 100 | Plus |
3L | 28110227 | 3L | 20832844..20833207 | 24..387 | 1820 | 100 | Plus |
3L | 28110227 | 3L | 20833728..20833869 | 759..900 | 710 | 100 | Plus |
3L | 28110227 | 3L | 20834000..20834083 | 899..982 | 420 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 05:44:04 has no hits.
BO31738.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-25 14:07:11 Download gff for
BO31738.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Pka-R1-RW | 264..1229 | 17..984 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:40:34 Download gff for
BO31738.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Pka-R1-RW | 264..1229 | 17..984 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 06:17:11 Download gff for
BO31738.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Pka-R1-RW | 264..1229 | 17..984 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 06:17:11 Download gff for
BO31738.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 20834002..20834083 | 901..984 | 97 | | Plus |
3L | 20832839..20833205 | 17..385 | 98 | -> | Plus |
3L | 20833283..20833657 | 386..760 | 100 | -> | Plus |
3L | 20833730..20833869 | 761..900 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:40:34 Download gff for
BO31738.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 20825939..20826305 | 17..385 | 98 | -> | Plus |
arm_3L | 20826383..20826757 | 386..760 | 100 | -> | Plus |
arm_3L | 20826830..20826969 | 761..900 | 100 | -> | Plus |
arm_3L | 20827102..20827183 | 901..984 | 97 | | Plus |
BO31738.pep Sequence
Translation from 16 to 1000
> BO31738.pep
MPKEQVKLDASRQVISPDDCEDLSPMPQTAAPPVRRRGGISAEPVTEEDA
TNYVKKVVPKDYKTMNALSKAIAKNVLFAHLDESERSDIFDAMFPVNHIA
GENIIQQGDEGDNFYVIDVGEVDVFVNSELVTTISEGGSFGELALIYGTP
RAATVRAKTDVKLWGIDRDSYRRILMGSTIRKRKMYEEFLSRVSILESLD
KWERLTVADSLETCSFDDGETIVKQGAAGDDFYIILEGCAVVLQQRSEQG
EDPAEVGRLGSSDYFGEIALLLDRPRAATVVARGPLKCVKLDRARFERVL
GPCADILKRNITQYNSFVSLSVASFLDH
BO31738.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:21:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Pka-R1-PW | 322 | CG42341-PW | 1..322 | 1..322 | 1640 | 100 | Plus |
Pka-R1-PAC | 377 | CG42341-PAC | 56..377 | 1..322 | 1626 | 99.1 | Plus |
Pka-R1-PAB | 377 | CG42341-PAB | 56..377 | 1..322 | 1626 | 99.1 | Plus |
Pka-R1-PZ | 320 | CG42341-PZ | 2..320 | 4..322 | 1623 | 100 | Plus |
Pka-R1-PQ | 321 | CG42341-PQ | 1..321 | 1..322 | 1623 | 99.7 | Plus |