Clone BO31739 Report

Search the DGRC for BO31739

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:317
Well:39
Vector:pDNR-Dual
Associated Gene/TranscriptAP-1gamma-RB
Protein status:BO31739.pep: Imported from assembly
Sequenced Size:2962

Clone Sequence Records

BO31739.complete Sequence

2962 bp assembled on 2013-01-22

GenBank Submission: KX799646

> BO31739.complete
GAAGTTATCAGTCGACATGTATCCGTATTACGAGCAGGACTGGAGCGTTC
TGCCGCCGGAGAACAATCGCAGATTTAATCCAGCCTTCAATATGGCCACC
ATACGGCAAGCATTCACAGAGGCGGTGGAGAGAGTCAGAATGCCTACGCC
CACACGCCTGCGCGACCTCATCCGACAGATTCGCGCCGCCAGAACCGCCG
CCGAGGAGCGGGCGGTGGTCAACAAAGAGTGCGCCTACATACGGAGCACG
TTCCGCGAGGAGGACTCCGTCTGGCGCTGTCGCAACATTGCCAAGCTGCT
GTACATACACATGCTCGGCTATCCGGCTCACTTTGGCCAACTGGAGTGCC
TTAAGCTGACGGCCAGCACGCGGTTCACAGACAAGCGGATCGGCTACCTG
GGCGCCATGCTGCTGCTGGATGAGCGGCAGGATGTCCACCTGCTTATCAC
CAACTGCTTGAAGAACGACTTGAACAGCTCTACGCAGTTCGTCGTGGGCC
TAGCCCTATGCACTCTGGGTGCGATCGCCTCACCGGAGATGGCCCGAGAT
CTGGCCAGCGAGGTGGAGCGTCTGATGAAGTCCCCGAACACGTACATTCG
CAAGAAGGCGACGCTGTGCGCCTTTCGCGTCATTCGCCGTGTGCCCGAGC
TAATGGAGATCTTCTTGCCGGCCACGCGTTCCCTGCTCAGCGAGAAGAAT
CATGGAATTTTGATCACTGGCGTTACGCTGATCACGGAGATGTGCGAGAA
CAGTTCGGACACGCTGATGCATTTCAAGAAGATTGTGCCGAACTTGGTGC
GCATCCTGAAGAATCTGATCCTGGGCGGCTATTCGCCGGAGCACGATGTC
AGCGGCGTGAGCGATCCGTTCCTGCAGGTGAAGATACTGCGACTGCTGCG
CATACTGGGCCACAACGATCCGGACGCCTCGGAGGCGATGAACGATATAC
TGGCCCAGGTGGCCACCAACACGGAGACGAGCAAGAATGTGGGCAATACC
ATCCTCTACGAGACCGTGCTCTCCATCATGGACATACGCTCGGAGGGTGG
ACTGCGCGTCCTGGCCGTCAATATACTGGGACGATTCCTGCTCAACTCGG
ACAAGAACATACGGTATGTGGCACTGAACACGCTGCTGCGAACGGTGCAT
GCGGACACGTCGGCGGTGCAGCGGCATCGCACCACCATTCTGGAGTGCCT
CAAGGATCCGGACGTCTCGATCCGTCGGCGGGCGATGGAGCTATCGTTTG
CGCTGATCAATGCACAAAACATACGTACAATGACCAAGGAGCTGCTGCTC
TTCCTCGAGAAGGCGGACGCCGAGTTCAAGGCGCAGTGCAGCTCGGGCAT
GATACTGGCCGCCGAGCGTTACTCCCCGACAACGCGCTGGCATCTGGATA
CGCAGCTGAGCGTGCTGATTGCAGCGGGAAACTATGTGCGCGACGACGTC
GTCTCCTCCACCATCCAGCTGGTGTCCAGCAGTCCCGTCCCGGAGCAGAC
GTACATCACGAACCGTTTCTGGGAGTCGCTGCAGGTGGCCAATCATTGCG
AGGACAAGCAGCCGCTGCTGCAGGTTGCCGTCTGGGCCATAGGCGAGTAC
GGCGATCTCTTTATGTACGGCGCCAACGAGGATGAGTTTGAACGGCCCAC
TGAGAGTGATCTGATCGCTGTGTATTATAAGTTTTTAACCTCTGCTCAAG
TCTCGACCACAAGCAAGCAATATGCTCTGGTCTCCCTAGCCAAGCTAAGC
ACACGTTTGCAACAGTGCGTGGAGGAAATTCAGGCACTGATCACGTCTTT
TGGTAGCCATCTGAATGTGGATCTGCAGCAGCGAGGCGTGGAGTTCACAC
AGCTCTTTGGCCATTACAAGCATCTGCGTCCACCGCTGCTGGAAAAGATG
CCGGCCATGCAGATCAGCAGGATTAGCTCGCAGAATGGCGAGAGCGGCGG
TGGTTCCTTCGACGACAACAGTCCCGATGTCATCGAAAATGGCGTGGAAG
GAGGCGGCGGTGGCGGACACTCACTTATCGAAAGCAATATGAACACCCTT
GGTGACAATACGAACATTTTGCTAGATCTGCTGGGCAGCACGGATCTCTC
TGCGGGAGGAGCTGGTGATTTGGTGGCAGCCACGGATCTCTCGAATGCCG
TGCATAAAAAGAACTCGCGCAATGCCAACGATGTGGTGGCGCCCGTTTCC
AATAACCAGGATCTGTTGGATCTGCTCGATCTGGATCTATCGGCGCCCTC
GTCCACGACGACGGGTGCGCCAGCGGGCGGAGGAGGAGGCGGTGGCATTG
TGGCTCTGGTGGGCGATAATAACCAGAGCAGTGCGGCAAACATGAATAAC
ATGCTCGGTGGCCTGGACTTGGGCGGCTTTGGATCTGGTCTGGACAGCTC
TGCCAGCATACCCACAAACGGCAACGATTTGGCCAGCATGCTGGGTGGCC
TGGGTGCCCCGCCGGCTGCATCACCGTCTCTGGCGGCATCAGCTCCCGTT
GGCAACCTTATCGATGGCCATGCCGGCAGTCTGCTGGCCGATCTGAATCC
CACGGCTGCCTCCAACAATGTAGTAGTGCCTCCACAGGGTCCCAGGCTGA
CGGCGCTGGACAAGGATGGGTTACTCGTGCAACTGGTTTCGGTCAGGGGC
AGCGACTGCATGCGCATCTATATGACGACCACGAATAACTCAGACAATAC
CCTGGATCAGTACTTGCTGCAGGCGGCTGTGCAAAGGAGTTTCCAGCTGC
AGATGCTGACGCCATCTGGTTCCGTGCTGCCGCCCGGCGGAGTTATAACG
CAGGAGATGCGCGTGGTGGCCACGTCGAATGCGACACTGCGGATGCGTTT
GCGCATACAGTACGTGCTCGATGGCCAGCAGCAGGTGGAACAGACGGAGG
TCAGTGGATTCCCCGAGCAGCAGCCGGCGCCGGCGGCCGCAGAGGCAAGC
TTTCTAGACCAT

BO31739.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:11:49
Subject Length Description Subject Range Query Range Score Percent Strand
AP-1gamma-RB 2931 CG9113-PB 1..2928 17..2944 14610 99.9 Plus
AP-1gamma-RD 2949 CG9113-PD 1..2946 17..2944 14395 99.3 Plus
AP-1gamma-RI 2892 CG9113-PI 17..2889 72..2944 14335 99.9 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:11:50
Subject Length Description Subject Range Query Range Score Percent Strand
AP-1gamma-RB 4648 CG9113-RB 240..3168 16..2944 14615 99.9 Plus
AP-1gamma-RD 4666 CG9113-RD 240..3186 16..2944 14400 99.3 Plus
AP-1gamma-RI 4887 CG9113-RI 533..3405 72..2944 14335 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:11:46
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 9113974..9114570 1038..1634 2985 100 Plus
X 23542271 X 9115195..9115711 2062..2578 2585 100 Plus
X 23542271 X 9114838..9115126 1774..2062 1430 99.7 Plus
X 23542271 X 9113641..9113899 780..1038 1295 100 Plus
X 23542271 X 9111854..9112093 466..705 1185 99.6 Plus
X 23542271 X 9111597..9111786 276..465 950 100 Plus
X 23542271 X 9115764..9115909 2578..2723 730 100 Plus
X 23542271 X 9111385..9111528 133..276 720 100 Plus
X 23542271 X 9114633..9114773 1634..1774 705 100 Plus
X 23542271 X 9116146..9116259 2831..2944 570 100 Plus
X 23542271 X 9115968..9116079 2720..2831 560 100 Plus
X 23542271 X 9112162..9112239 704..781 390 100 Plus
X 23542271 X 9111078..9111143 69..134 330 100 Plus
X 23542271 X 9108930..9108986 16..72 285 100 Plus
Blast to na_te.dros performed on 2014-11-28 13:11:48 has no hits.

BO31739.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-22 18:21:55 Download gff for BO31739.complete
Subject Subject Range Query Range Percent Splice Strand
AP-1gamma-RB 239..3166 17..2946 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:00:56 Download gff for BO31739.complete
Subject Subject Range Query Range Percent Splice Strand
AP-1gamma-RB 241..3168 17..2946 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:23:04 Download gff for BO31739.complete
Subject Subject Range Query Range Percent Splice Strand
AP-1gamma-RB 241..3168 17..2946 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:23:04 Download gff for BO31739.complete
Subject Subject Range Query Range Percent Splice Strand
X 9108931..9108986 17..72 100 -> Plus
X 9111082..9111143 73..134 100 -> Plus
X 9111387..9111528 135..276 100 -> Plus
X 9111598..9111786 277..465 100 -> Plus
X 9111854..9112092 466..704 99 -> Plus
X 9112163..9112239 705..781 100 -> Plus
X 9113643..9113899 782..1038 100 -> Plus
X 9113975..9114570 1039..1634 100 -> Plus
X 9114634..9114772 1635..1773 100 -> Plus
X 9114838..9115126 1774..2062 99 -> Plus
X 9115196..9115711 2063..2578 100 -> Plus
X 9115765..9115908 2579..2722 100 -> Plus
X 9115971..9116078 2723..2830 100 -> Plus
X 9116146..9116259 2831..2946 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:00:56 Download gff for BO31739.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 9002964..9003019 17..72 100 -> Plus
arm_X 9005115..9005176 73..134 100 -> Plus
arm_X 9005420..9005561 135..276 100 -> Plus
arm_X 9005631..9005819 277..465 100 -> Plus
arm_X 9005887..9006125 466..704 99 -> Plus
arm_X 9006196..9006272 705..781 100 -> Plus
arm_X 9007676..9007932 782..1038 100 -> Plus
arm_X 9008008..9008603 1039..1634 100 -> Plus
arm_X 9008667..9008805 1635..1773 100 -> Plus
arm_X 9008871..9009159 1774..2062 99 -> Plus
arm_X 9009229..9009744 2063..2578 100 -> Plus
arm_X 9009798..9009941 2579..2722 100 -> Plus
arm_X 9010004..9010111 2723..2830 100 -> Plus
arm_X 9010179..9010292 2831..2946 98   Plus

BO31739.pep Sequence

Translation from 16 to 2962

> BO31739.pep
MYPYYEQDWSVLPPENNRRFNPAFNMATIRQAFTEAVERVRMPTPTRLRD
LIRQIRAARTAAEERAVVNKECAYIRSTFREEDSVWRCRNIAKLLYIHML
GYPAHFGQLECLKLTASTRFTDKRIGYLGAMLLLDERQDVHLLITNCLKN
DLNSSTQFVVGLALCTLGAIASPEMARDLASEVERLMKSPNTYIRKKATL
CAFRVIRRVPELMEIFLPATRSLLSEKNHGILITGVTLITEMCENSSDTL
MHFKKIVPNLVRILKNLILGGYSPEHDVSGVSDPFLQVKILRLLRILGHN
DPDASEAMNDILAQVATNTETSKNVGNTILYETVLSIMDIRSEGGLRVLA
VNILGRFLLNSDKNIRYVALNTLLRTVHADTSAVQRHRTTILECLKDPDV
SIRRRAMELSFALINAQNIRTMTKELLLFLEKADAEFKAQCSSGMILAAE
RYSPTTRWHLDTQLSVLIAAGNYVRDDVVSSTIQLVSSSPVPEQTYITNR
FWESLQVANHCEDKQPLLQVAVWAIGEYGDLFMYGANEDEFERPTESDLI
AVYYKFLTSAQVSTTSKQYALVSLAKLSTRLQQCVEEIQALITSFGSHLN
VDLQQRGVEFTQLFGHYKHLRPPLLEKMPAMQISRISSQNGESGGGSFDD
NSPDVIENGVEGGGGGGHSLIESNMNTLGDNTNILLDLLGSTDLSAGGAG
DLVAATDLSNAVHKKNSRNANDVVAPVSNNQDLLDLLDLDLSAPSSTTTG
APAGGGGGGGIVALVGDNNQSSAANMNNMLGGLDLGGFGSGLDSSASIPT
NGNDLASMLGGLGAPPAASPSLAASAPVGNLIDGHAGSLLADLNPTAASN
NVVVPPQGPRLTALDKDGLLVQLVSVRGSDCMRIYMTTTNNSDNTLDQYL
LQAAVQRSFQLQMLTPSGSVLPPGGVITQEMRVVATSNATLRMRLRIQYV
LDGQQQVEQTEVSGFPEQQPAPAAAEASFLDH

BO31739.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:05:35
Subject Length Description Subject Range Query Range Score Percent Strand
AP-1gamma-PB 976 CG9113-PB 1..976 1..976 4949 100 Plus
AP-1gamma-PD 982 CG9113-PD 1..982 1..976 4932 99.4 Plus
AP-1gamma-PI 963 CG9113-PI 7..963 20..976 4836 100 Plus
AP-1gamma-PF 963 CG9113-PF 7..963 20..976 4836 100 Plus
AP-1gamma-PG 963 CG9113-PG 7..963 20..976 4836 100 Plus