Clone BO31740 Report

Search the DGRC for BO31740

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:317
Well:40
Vector:pDNR-Dual
Associated Gene/TranscriptMbs-RI
Protein status:BO31740.pep: Imported from assembly
Sequenced Size:3466

Clone Sequence Records

BO31740.complete Sequence

3466 bp assembled on 2012-05-15

GenBank Submission: KX797525

> BO31740.complete
GAAGTTATCAGTCGACATGTCCTCGCTGGACGCACGCAACAACTCGGCGA
TGATGAAGCGCGCCGAGCAGCTGAAGCGCTGGGAGGAGTCGGACACAAAC
CGCGCCGCCCCCACCCCCCGGCACGAGCACGGCCGCAGGATCAAGTTCAG
CTCCGGCTGTGTCTTCCTCGCCGCCTGCCTTTCCGGCGACAAGGACGAGG
TCGTCCAGCTGCTCGACCAGGGCGCCGACATCAACACCGCCAACGTCGAT
GGACTCACCGCCCTGCACCAGGCGTGCATAGACGACAATCTGGACATGGT
GGAGTTTCTAGTGGAGCGAGGTGCCGACATAAACCGCCAGGATAACGAGG
GCTGGACGCCACTGCACGCCACTGCCTCCTGCGGATTTGTGAGCATAGCT
CGGTATTTGGTGGAAAATGGCGCTGATGTGGCCGCTGTGAACAGCGATGG
TGATTTGGCCTTGGATTTGGCCATCGATGTACAGCACATGGCCATGATTG
ACTACATGGAGAAGATGGTGCAGGAGCTGAACATCAACGTGGATGAGGCT
CGAAAGGCCGAGGAGCTGGCGATGCTGAACGATGCCAAAAAGTGGCTGAG
AAGCGATGCCGCCGAGGTGGATAGACCGCACCCGAAAACGGGAGCCACAG
CCCTCCACGTAGCCGCCGCAAAGGGTTACACGAAAGTGCTGGGTCTGCTC
CTGGCCGGACGTGGCAATGTGGATCGTCAGGATAACGATGGCTGGACGCC
ACTGCACGCGGCATCGCATTGGGGTCAGCGGGAGACGGCCGAGATGCTCG
TGGAGTCACTGGCCGACATGGATATACGAAACTATGCCGGGCAGTCATGC
ATCGATGTGGCCGATCGCAAAATAGTCAAATTCCTGGAAGAACTGCGGGC
CAACAAACGCAACAAGCGGCGACCATCTAGTCAAATAAGAATCTCAGATG
CAATGGAAAATCATGTGGAGAAGACGCCCACTAAACTGGTGCGCGTTGAA
GTGAGAACTGATGCCACAAAGGATGCTGAGAACGTGAAGCCCAACCAGCA
GATCCACGCCGTCGAGCATCCAGTCGAGGAGGAGGCGCCATGGCGACGCA
AACTGCCCCGCACACCCAGCGATAGTCCCACTAATAATCAAGTTCCTGAT
AGAGAGCTCGGCACCAATAGCTCGGAGACCGCCAACGACGTCATTTTGCG
GCGCACGCAAAGCTTTGAGAACGATCAAAAGAAACCGACCGTTACGATTG
CAACGAGCACAGCAGCCACAGCGATCAATTCTCCATCGACAACTGTACAG
ACCCCACCAATTCGCAGCCAAGTTACAGCGAAAATAGCAGAAAAGAGCAA
TAATGGCAGCTCGTCCACGGCCAGTGTCAGCGATGCGGAGAGCTCCAAGC
CACCGCCCAAACAATCCGCGAGCAATATGATCAAGAACTTCTTCAAATCC
TTTGTGCCACCGGTGCGTGATGAAGAGAGCGAAACGCAGCGGAAGGCACA
TGCTAAGCGTGTGAGGGAGACTCGACGGTCTACCCAAGGTGTCACCCTGG
ACGAGATCAAGAGTGCCGAGGAGCTGGTTAAGAAGAAGAACATGGGCATG
GCCAACAACAACAATAACAACAATATTAGCACCACCACCACGAACACGAT
CAGCAACAGCGGCAACGAAACAAGCTCTGCATCATCGACATCAGCTCCAA
CACCATCGATCCTCGGCAGCAATGAGCAGCAGGACGAGCTGCAACCACCG
CCACCGCCCACCACACCACCGCCAGCTGTAATACCCACCACAACAACGGC
CACCGATGAGACAGAGATCGAGGAGGTGGTGTCCAGTCCTCCAGCTGGCC
AAAGTCAAAACGATACCACTGCTAGTTTTACGCTATCGGCTCCCGTGCGA
AGATCGCTGTCGACCGAGGGCGAAGCCGATGCCAATAGTGATCCGGAGGG
TGATCAGGATCAGACGGTGGTCAGTGCCAGCTATACGATAATGCCCAGGC
GGGAGAGGCTTCCCGAAAGCTCCGAGAATGTAGAGAGCATAAGATCGCCA
CAAAAGACTGAGCCAGTTGCCAAAAGTTCCAGCGAGGATAAGTCCGAGGA
GCCACCACATGCCAGGCCCACGGATCTGCCACTAATTCCGGCTCCAGCTG
CTCCCAGCACAGAAGCTATCAAATCATCCTCGGCGGCCACTACGCCCGCT
GCCCTCGAGAGTCCAGTGCGCTTGCGGGATAAGCGGGGTCTGTCCGGCAG
CCAAGAATCGGAAACCAAGTCCGATACCGCCTCGCCCGTGTCCTCACATC
CGGACTTCAATGCCCGGGACTCGCTACTCAGTCTATACGCCCGTCGCACA
ACGGACAGCAGCGCGGGAGGCGGAGGAGTTGGTGGTGGTGCAGGTGTAGG
TGCAGGTGGTGCAAGTGGAGCTGCAACCTCGTCTTCAACTTCGGCAGCGG
AACGGCGTCCGTCTTGGCGCCTGAAATTCGATGCCGGCTCCAAGTTCAAG
TTGGAGGACATAACCAGCGGTGGCACATATCCGCCCAACAACAGCACCAT
CATACCCAGTGCTCCGGCGGTAATGGCAGCCGCCAACTTATCAACCACAA
CTGGTGTCCAGCGGCGCATCAGCAGCGGTCCCATCGCACTAAATGCTTCC
AATCAGTCGCTCAACTCTGTGGGTCGTCCAGTTTCCGCGCCAAGCGAGGG
CACCAACAACAGTGCCTATGTCACGCCCTCAGCTCGCAAATTCGAGACGA
ACGCCACGTCCACGGGAGCGACCACTGCAGCGACCACGACCAGCAACTCA
ACCTCCAATTCAGTGTCTGCAACCAGTGCCAATCATACAACGGCTACGGC
ACCAAATGCCACGTCAAACCATGACGATAAGGATAATGATAAGGAGAACG
ACAATCGCACACAGACGGTTATTCAGAGGCGGCGAAAGCCGAAGCGCAGA
TCAACGGGCGTGGTGCACATCGATATGGATGAACTGGATCCCGAGCGACA
GAACGAATCGTCCAACAACGACAACGAGGAGAAGGAGAAGGAGAGTGGCA
GTGAGCGGACATCCCGTTCCCGGCTGGGCAGCACCGCGAGTACGGCCACC
ACCAGCGAGTCAAAGAGCTCCAGCAGCAATGACAAGACGGAGAATGGCGA
TGGCATTGACTACAAGGCGCTCTGGGAAGCGGAAAAATTGGAGAACGATA
AGCTGAGGCAGATGCTCAAGCAGAAGGACGATGAAGCCGTCCAGACACGT
GCAACACTCGAGAGATTCGCCAATGCCACAACGAAAAATTCACTATCTGA
ACTTGAGAAACGCGAAAGAAGAGCTATGGAACGCAAGCTTTCCGAGTTGG
AAGAAGAGCTCAAGCAACTCGATGCCTACAAATCGGATAATCATCGCCTG
AAGGAGGAGAACGCCGCGTTGATTAGAGTAATTAGCAAATTAAGTAAAGC
AAGCTTTCTAGACCAT

BO31740.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:03:25
Subject Length Description Subject Range Query Range Score Percent Strand
Mbs-RI 3435 CG32156-PI 1..3432 17..3448 17160 100 Plus
Mbs-RO 3822 CG32156-PO 1602..3819 1231..3448 11090 100 Plus
Mbs-RN 3738 CG32156-PN 1605..3651 1231..3277 10235 100 Plus
Mbs-RO 3822 CG32156-PO 1..1215 17..1231 6075 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:03:26
Subject Length Description Subject Range Query Range Score Percent Strand
Mbs-RI 5102 CG32156-RI 487..3918 17..3448 17160 100 Plus
Mbs-RO 5520 CG32156-RO 2119..4336 1231..3448 11090 100 Plus
Mbs-RN 5686 CG32156-RN 2372..4418 1231..3277 10235 100 Plus
Mbs-RO 5520 CG32156-RO 518..1732 17..1231 6075 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:03:21
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 16068113..16068943 1664..2494 4155 100 Plus
3L 28110227 3L 16062307..16062862 384..939 2780 100 Plus
3L 28110227 3L 16053306..16053561 17..272 1280 100 Plus
3L 28110227 3L 16070328..16070581 2640..2893 1225 98.8 Plus
3L 28110227 3L 16066613..16066829 1447..1663 1085 100 Plus
3L 28110227 3L 16070118..16070264 2493..2639 735 100 Plus
3L 28110227 3L 16076980..16077124 3042..3186 725 100 Plus
3L 28110227 3L 16066183..16066313 1316..1446 655 100 Plus
3L 28110227 3L 16062128..16062243 269..384 580 100 Plus
3L 28110227 3L 16063885..16063999 1025..1139 575 100 Plus
3L 28110227 3L 16070832..16070931 2882..2981 500 100 Plus
3L 28110227 3L 16064227..16064318 1140..1231 460 100 Plus
3L 28110227 3L 16077192..16077282 3187..3277 455 100 Plus
3L 28110227 3L 16063086..16063173 938..1025 440 100 Plus
3L 28110227 3L 16066023..16066116 1231..1324 440 97.9 Plus
3L 28110227 3L 16077723..16077809 3278..3364 435 100 Plus
3L 28110227 3L 16080757..16080842 3363..3448 430 100 Plus
3L 28110227 3L 16071109..16071171 2981..3043 315 100 Plus
Blast to na_te.dros performed 2014-11-28 13:03:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2328..2523 1603..1797 311 64.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6798..7019 1569..1803 234 60.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2398..2549 1580..1731 219 62.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2356..2544 1569..1767 213 61.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2444..2664 1581..1797 160 56 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 1521..1594 1603..1673 138 67.6 Plus
Dyak\TART 8444 Dyak\TART TARTYAK 8444bp 5992..6094 1542..1640 118 60.2 Plus
Dsim\ninja 6644 Dsim\ninja DSRN 6644bp Derived from D83207 (Rel. 53, Last updated, Version 4). 2945..3027 487..569 118 65.1 Plus

BO31740.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-15 10:36:06 Download gff for BO31740.complete
Subject Subject Range Query Range Percent Splice Strand
Mbs-RI 478..3909 17..3450 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:50:22 Download gff for BO31740.complete
Subject Subject Range Query Range Percent Splice Strand
Mbs-RI 487..3918 17..3450 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:20:19 Download gff for BO31740.complete
Subject Subject Range Query Range Percent Splice Strand
Mbs-RI 487..3918 17..3450 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:20:19 Download gff for BO31740.complete
Subject Subject Range Query Range Percent Splice Strand
3L 16076982..16077124 3044..3186 100 -> Plus
3L 16077192..16077282 3187..3277 100 -> Plus
3L 16077723..16077809 3278..3364 100 -> Plus
3L 16080759..16080842 3365..3450 97   Plus
3L 16053306..16053560 17..271 100 -> Plus
3L 16062131..16062243 272..384 100 -> Plus
3L 16062308..16062862 385..939 100 -> Plus
3L 16063088..16063173 940..1025 100 -> Plus
3L 16063886..16063999 1026..1139 100 -> Plus
3L 16064227..16064317 1140..1230 100 -> Plus
3L 16066023..16066109 1231..1317 100 -> Plus
3L 16066185..16066313 1318..1446 100 -> Plus
3L 16066613..16066829 1447..1663 100 -> Plus
3L 16068113..16068943 1664..2494 100 -> Plus
3L 16070120..16070264 2495..2639 100 -> Plus
3L 16070328..16070570 2640..2882 100 -> Plus
3L 16070833..16070930 2883..2980 100 -> Plus
3L 16071109..16071171 2981..3043 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:50:22 Download gff for BO31740.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 16063220..16063364 2495..2639 100 -> Plus
arm_3L 16046406..16046660 17..271 100 -> Plus
arm_3L 16055231..16055343 272..384 100 -> Plus
arm_3L 16055408..16055962 385..939 100 -> Plus
arm_3L 16056188..16056273 940..1025 100 -> Plus
arm_3L 16056986..16057099 1026..1139 100 -> Plus
arm_3L 16057327..16057417 1140..1230 100 -> Plus
arm_3L 16059123..16059209 1231..1317 100 -> Plus
arm_3L 16059285..16059413 1318..1446 100 -> Plus
arm_3L 16059713..16059929 1447..1663 100 -> Plus
arm_3L 16061213..16062043 1664..2494 100 -> Plus
arm_3L 16063428..16063670 2640..2882 100 -> Plus
arm_3L 16063933..16064030 2883..2980 100 -> Plus
arm_3L 16064209..16064271 2981..3043 100 -> Plus
arm_3L 16070082..16070224 3044..3186 100 -> Plus
arm_3L 16070292..16070382 3187..3277 100 -> Plus
arm_3L 16070823..16070909 3278..3364 100 -> Plus
arm_3L 16073859..16073942 3365..3450 97   Plus

BO31740.pep Sequence

Translation from 16 to 3466

> BO31740.pep
MSSLDARNNSAMMKRAEQLKRWEESDTNRAAPTPRHEHGRRIKFSSGCVF
LAACLSGDKDEVVQLLDQGADINTANVDGLTALHQACIDDNLDMVEFLVE
RGADINRQDNEGWTPLHATASCGFVSIARYLVENGADVAAVNSDGDLALD
LAIDVQHMAMIDYMEKMVQELNINVDEARKAEELAMLNDAKKWLRSDAAE
VDRPHPKTGATALHVAAAKGYTKVLGLLLAGRGNVDRQDNDGWTPLHAAS
HWGQRETAEMLVESLADMDIRNYAGQSCIDVADRKIVKFLEELRANKRNK
RRPSSQIRISDAMENHVEKTPTKLVRVEVRTDATKDAENVKPNQQIHAVE
HPVEEEAPWRRKLPRTPSDSPTNNQVPDRELGTNSSETANDVILRRTQSF
ENDQKKPTVTIATSTAATAINSPSTTVQTPPIRSQVTAKIAEKSNNGSSS
TASVSDAESSKPPPKQSASNMIKNFFKSFVPPVRDEESETQRKAHAKRVR
ETRRSTQGVTLDEIKSAEELVKKKNMGMANNNNNNNISTTTTNTISNSGN
ETSSASSTSAPTPSILGSNEQQDELQPPPPPTTPPPAVIPTTTTATDETE
IEEVVSSPPAGQSQNDTTASFTLSAPVRRSLSTEGEADANSDPEGDQDQT
VVSASYTIMPRRERLPESSENVESIRSPQKTEPVAKSSSEDKSEEPPHAR
PTDLPLIPAPAAPSTEAIKSSSAATTPAALESPVRLRDKRGLSGSQESET
KSDTASPVSSHPDFNARDSLLSLYARRTTDSSAGGGGVGGGAGVGAGGAS
GAATSSSTSAAERRPSWRLKFDAGSKFKLEDITSGGTYPPNNSTIIPSAP
AVMAAANLSTTTGVQRRISSGPIALNASNQSLNSVGRPVSAPSEGTNNSA
YVTPSARKFETNATSTGATTAATTTSNSTSNSVSATSANHTTATAPNATS
NHDDKDNDKENDNRTQTVIQRRRKPKRRSTGVVHIDMDELDPERQNESSN
NDNEEKEKESGSERTSRSRLGSTASTATTSESKSSSSNDKTENGDGIDYK
ALWEAEKLENDKLRQMLKQKDDEAVQTRATLERFANATTKNSLSELEKRE
RRAMERKLSELEEELKQLDAYKSDNHRLKEENAALIRVISKLSKASFLDH

BO31740.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:30:45
Subject Length Description Subject Range Query Range Score Percent Strand
Mbs-PI 1144 CG32156-PI 1..1144 1..1144 5788 100 Plus
Mbs-PJ 1101 CG32156-PJ 1..1101 1..1144 5522 96.2 Plus
Mbs-PQ 1111 CG32156-PQ 1..1103 1..1146 5453 94.8 Plus
Mbs-PO 1273 CG32156-PO 1..1273 1..1144 3910 67.6 Plus
Mbs-PL 1230 CG32156-PL 1..1230 1..1144 3644 64.1 Plus