BO31743.complete Sequence
4144 bp assembled on 2012-05-15
GenBank Submission: KX800024
> BO31743.complete
GAAGTTATCAGTCGACATGGCAGAACCCCGTCCCGGCGGCTACAACTACA
AGACATTATTATGCAGAAACATTCCGGAGCTATTTTTGGACAAATATGTG
GCGCGTTCGCACTTTGGACGTTTTGGAACCCTCGTAAACTTCGTCCTGCG
TCCGCGGCGAATGACCTGCACCGTAAGCTATGCCAGCGAGGACGAGGCGG
CGCGGGCGCTTCTCGATGGCGCCAGCTTTCAGGGTCACCTGTTTGATATA
TCCTATGCTGATAACGAGACGGCGCCGGCACAGAAAACGGAGGAGTGGGT
GGATCCTGACATTCAGGCGGAGTTGAGTGCACTGCAGTCGGGCTGGCGCA
ATGAGTATGGGTCGGGCAAGCCGATAAAAAAACCACAAAATGGCAGCAGT
GGTAGCGGTGGCAGTTCAATGCTGCCTGCCATACCAGTTGGGCCCGCAAC
GGCGCCGGTGAGCAGAGATCGTACGCCTGCCCAGCTCAGGGATCTTGAGA
ACATGATGCGCAGACCCGCCCATACAAGCGAGGAGAAGTTCAGCGTGCTG
GATGCCCGCGATAAGCTGCTCCGGTTGAACCGAACGCAACACAAGCTGTC
CGGTGCCACCCAGGGTCACTGCGCCGATATGTGTCCGGAAAAGGAGCGCG
TGCTGAGAGAATTCCAGCGCCAGGTAGCCTACTATGAACTACAACCGGGC
TCCGATGAGCTAATCTGTCACGAAAGAGCCCTGAAGCAGTACTCGCGCAG
CAGTGCCGACCAGGAGACGCCACTGCCGCATGAACTGCGCAATGAGACTG
CCCTGCACATGACCATGAGCTATCTAATGCATGAGATCATGGACATTAGC
GAGCGCCAGGATCCGCAAAGCCATATGGGCGATTGGTTCCACTTCGTTTG
GGATCGCACGAGGTCCATCCGAAAGGAGATCACCCAGCAGGAGCTATGCT
CTCTGGGCGCTGTGAAGCTGGTGGAGCAGTGCGCCCGGTTTCACATTCAT
TGCGCCGCCCGTCTGGTTGACGCCGATCCCAGCGTCTTTGACAGCAAGAT
CAACGCCGAGAATCTAACCAAATGCCTGCAGACTCTGAAGTACATGTACC
ATGACCTGCGGATTAAGGGCGTTCCATGTCCCAAAGAGGCGGAATTCCGG
GGCTACATTGTGTTGCTCAATCTGGCCGATGCCAACTTTCTCTGGGACAT
CGGTCAGCTGCCCGCGGAACTGCAGAGTTGTCCCGAAGTGCGTCAAGCCA
TTCAGTTCTACTTGGCCCTGCAGGACACGAATTTTGTGCGGTTCTTTCAG
CTGCTGGCTGACAAGGATACCAGCTACCTGAGTGCCTGCATCCTAGTCAA
TTACTTTACGCGACTGCGCGTGCTGGGGTTGCATCGTCTGATCCAGGCGT
ATAGGTCTCCGCGGAAGGATGAGGTGTCTTCGCTGCCTCTCAGCTACATC
GCCGAGCTGCTGAGCTTTGCCAGCGAACAGGAGGCGGCGGATTTTGTCCA
ACACTATGGCCTGCAGATCAACGAGGCGGGCAGAGTTGTGCTAAGCAGAA
TGCACACGGTGGAGACGGAGTACAAGCTGCCGCGACAGTATGAGTTGGTG
GAAGTGAAACGCGTGAAGAGCGTGGGCGAAGTCGTCAGTGGGGAACCTTT
ACCACCACGAGACCTCTACCTCAATCACCGACCGCACAATAGCTTCGACG
ATTATGGAATGCTTAAGAGCATTGCATGGACGGCCAAGGATCAGCTGGCT
GGCATGCAGCAAGAGGAGATGCAGCCACAAATGCCTTCGCAGCCACCAGC
AGTCTCAAAACATAGCGATACTTTGTTTAAGGTGCCCATGCAACCCGACG
GAACGGCAGCAGGGTTTGGAGTATTTGCTGCGGCTGCTGTTCCGCCAGCC
TCCTCCATCGATGGATTCAGTTTTGTTCTTCCCAAATCACGTGCTCAGGA
GTTCCAGGAACAAGCTCCGGCTACACAGCAGCGACGGGCACAAGAAGAGG
CCAAGCATCAGGCCCTCCAAGTAGCCATTGCCGCTGCAAAGAAGCGGGAA
GCTGAGCTAATGGCTATTCACGAGGCCAAAGTGGCCGAGGCTGAGCGAGT
GCGTCAGCAGAAACTCAGGGAACGCCAGGAGCAGCAGCGTCGCCAGCAGC
AGGAACTGGAGGAACAACGCCAGCGGGAGCAGGAGAAACTTCAGCTGGAA
AAAGAGAGGCAACTGAAACTGGAACAGTTGTTTTTTGTGCAGCAGCAGGA
AAGGGAGGCCCACAAACAGACCAGGACTTTGGAGTTGTATCAGGAAATAT
TCCAGGACACCCTCGCGGAGATTTGCCAAAGCGAGTTTATGTCGCATAGT
CGGGCTTGCCGTTCCTACGAATCCATGCTGGACTCAATAACACGCGATCT
CGTCGAGCGGCAGATGGAGCAATCCATCTACGAACTAGGCGTCATGAGGG
TGTGCATCAGACGATGGCGGAAATATCGGCGAACGCAACAGGAGAAGGAC
ACGCTATTTAACCAACTGCCTTTAAGTTTTGGAGCCGAAAACCCCGAAGG
AGTGGTGAACAAACGAAGCATGGAAGATTCACTGCGTCTAAGCAGACGCT
ATCGACTTGGCGAGCCCTGCGATTATGGCAAACTTCTGGCTGGCCTGGAG
GAGCATAGTTGGCTGAAACTGGATCTGTGGCACGTTTTGGACAAGTGTCT
GCCGGTAGCGCAACCAGGAGCTAGACGCTTCTACAAGCTATTGATAAGCC
TGTCCGGCGGCCAGGAGGGTCTCCAGTTGAACTGCGATTTGGATAGGGGA
CTACTGCAGCAGCCACAGTCGCCGGATGCTCGTTTTGTGGATGGAGGCTA
CATCAGAGGCTTCTCTCAGGGTATTGGCTTGAGTGTGATGAAGATCCGAG
ATGATGACCACGACTGGAAAGCCACCGACCTGGCCGAAGCCAATGGTATT
ATTTGCTTAATCGGGCTGGATGACATTCGTTTACTGCCGGATCGCTTGAA
ACCATTGCTGCAAGCAAGCCGCTGTCATGATGTGGCTGTAATTGTTCAGC
ATCCAGCTAATACCGCCTTTGTTCAACCTGATATTCCTCTCCAGGAACTA
TGTCTGCGCTCATTTAACATCTTTCGTTTGCGAAAATCTGGAAACAACCG
CCAGCGCTTAATGATTGCACTGGAATCGGCTGTAAAGTTTTTGGCCAAAG
CCACGGAAAGGAAACGTGTTGGACATCTTCACCAAGTGGAGACCCGCGAG
TATTTGCTCGTTAATCTGGGATCGGAACTATTTCGCCGCCTAAAATACGC
CGCTGAGCACGATACGGCCATTAGAAGCGACACTCAGCTGAATCCACAGC
GTTGTGTGGACCTTTTTAACGAGGCAGTGCACCGCCTGCAATTGGTAGCC
GGCGAGGATTTAAGCGACTGGCCCCAGTTTCCCGAGGAGCTGCGTGTCTT
TGTGCAGCCACTGCCCATCGAATCATCACTAAACACCAATCGCTTGGAGC
ACTTTGAACCCGGTTGGCACTTGCCCGAGCGACGTCAGCGTATTGTCCAG
CTTTTGGAGCGCTGTAAACTTCCAAAGATGCCGGTACTGCCGAGGTCTTC
ATCCCTGGCCGAAGCCCAATGCCAGTGGGTGTTGGACTACGCGCAGATAA
GTCAGCAGGAAGACTGCGTGGAACAGATCGCCCTCCAGGCCATTAAAATT
CTGCAATACGACACGGATGACTACTTGAACTTTGTGGAATATCTCGCTGG
CGAACGAATGCAATACATACTGCGGCAAGAGAGGAATCCGCCCCAAGGAA
TTGTGTACAATACGAAAACGCTGAAGAGACGCTTCCTGAGCGCATGGTAC
TATGAGTTTCGTGAGCCTCAGATTTACGAGCCCGTTCCCGCCGAAGAGAA
TGCCCAGATGCTGGAGAAGCAGCCATCATCACAAGCGGAGGTGCAACAAC
TGGATTTCGACGAGATTACGAGCAAGGCTGAGGCTGTTCTGAAGAGGTTT
CACCAGCGTCAGGATGAGCGTCACACCCTGCGCGAGCTCAACAGGTCACA
TAAGTCGAGGAAGAGGAGAGACGCATCGGACCACAAACATGCCAGTAAGC
ACAAGCGCAAGCGGTCCAAATCCAAGGCAAGCTTTCTAGACCAT
BO31743.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:16:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| xmas-2-RA | 4113 | CG32562-PA | 1..4110 | 17..4126 | 20550 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:16:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| xmas-2-RA | 5073 | CG32562-RA | 93..4202 | 17..4126 | 20550 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:16:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 17154981..17157514 | 4126..1593 | 12670 | 100 | Minus |
| X | 23542271 | X | 17157573..17159106 | 1594..61 | 7670 | 100 | Minus |
| X | 23542271 | X | 17159171..17159214 | 60..17 | 220 | 100 | Minus |
Blast to na_te.dros performed 2014-11-28 11:16:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2631..2876 | 1959..2197 | 178 | 55.6 | Plus |
BO31743.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-15 10:36:08 Download gff for
BO31743.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| xmas-2-RA | 93..4202 | 17..4128 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:18:42 Download gff for
BO31743.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| xmas-2-RA | 93..4202 | 17..4128 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:39:26 Download gff for
BO31743.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| xmas-2-RA | 93..4202 | 17..4128 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:39:26 Download gff for
BO31743.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 17154979..17157512 | 1595..4128 | 99 | <- | Minus |
| X | 17157573..17159106 | 61..1594 | 100 | <- | Minus |
| X | 17159171..17159214 | 17..60 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:18:42 Download gff for
BO31743.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 17049012..17051545 | 1595..4128 | 99 | <- | Minus |
| arm_X | 17051606..17053139 | 61..1594 | 100 | <- | Minus |
| arm_X | 17053204..17053247 | 17..60 | 100 | | Minus |
BO31743.pep Sequence
Translation from 16 to 4144
> BO31743.pep
MAEPRPGGYNYKTLLCRNIPELFLDKYVARSHFGRFGTLVNFVLRPRRMT
CTVSYASEDEAARALLDGASFQGHLFDISYADNETAPAQKTEEWVDPDIQ
AELSALQSGWRNEYGSGKPIKKPQNGSSGSGGSSMLPAIPVGPATAPVSR
DRTPAQLRDLENMMRRPAHTSEEKFSVLDARDKLLRLNRTQHKLSGATQG
HCADMCPEKERVLREFQRQVAYYELQPGSDELICHERALKQYSRSSADQE
TPLPHELRNETALHMTMSYLMHEIMDISERQDPQSHMGDWFHFVWDRTRS
IRKEITQQELCSLGAVKLVEQCARFHIHCAARLVDADPSVFDSKINAENL
TKCLQTLKYMYHDLRIKGVPCPKEAEFRGYIVLLNLADANFLWDIGQLPA
ELQSCPEVRQAIQFYLALQDTNFVRFFQLLADKDTSYLSACILVNYFTRL
RVLGLHRLIQAYRSPRKDEVSSLPLSYIAELLSFASEQEAADFVQHYGLQ
INEAGRVVLSRMHTVETEYKLPRQYELVEVKRVKSVGEVVSGEPLPPRDL
YLNHRPHNSFDDYGMLKSIAWTAKDQLAGMQQEEMQPQMPSQPPAVSKHS
DTLFKVPMQPDGTAAGFGVFAAAAVPPASSIDGFSFVLPKSRAQEFQEQA
PATQQRRAQEEAKHQALQVAIAAAKKREAELMAIHEAKVAEAERVRQQKL
RERQEQQRRQQQELEEQRQREQEKLQLEKERQLKLEQLFFVQQQEREAHK
QTRTLELYQEIFQDTLAEICQSEFMSHSRACRSYESMLDSITRDLVERQM
EQSIYELGVMRVCIRRWRKYRRTQQEKDTLFNQLPLSFGAENPEGVVNKR
SMEDSLRLSRRYRLGEPCDYGKLLAGLEEHSWLKLDLWHVLDKCLPVAQP
GARRFYKLLISLSGGQEGLQLNCDLDRGLLQQPQSPDARFVDGGYIRGFS
QGIGLSVMKIRDDDHDWKATDLAEANGIICLIGLDDIRLLPDRLKPLLQA
SRCHDVAVIVQHPANTAFVQPDIPLQELCLRSFNIFRLRKSGNNRQRLMI
ALESAVKFLAKATERKRVGHLHQVETREYLLVNLGSELFRRLKYAAEHDT
AIRSDTQLNPQRCVDLFNEAVHRLQLVAGEDLSDWPQFPEELRVFVQPLP
IESSLNTNRLEHFEPGWHLPERRQRIVQLLERCKLPKMPVLPRSSSLAEA
QCQWVLDYAQISQQEDCVEQIALQAIKILQYDTDDYLNFVEYLAGERMQY
ILRQERNPPQGIVYNTKTLKRRFLSAWYYEFREPQIYEPVPAEENAQMLE
KQPSSQAEVQQLDFDEITSKAEAVLKRFHQRQDERHTLRELNRSHKSRKR
RDASDHKHASKHKRKRSKSKASFLDH
BO31743.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:30:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| xmas-2-PA | 1370 | CG32562-PA | 1..1370 | 1..1370 | 7124 | 100 | Plus |
| CG3437-PB | 349 | CG3437-PB | 5..308 | 199..508 | 226 | 24.9 | Plus |
