BO31751.complete Sequence
3991 bp assembled on 2012-05-15
GenBank Submission: KX795892
> BO31751.complete
GAAGTTATCAGTCGACATGCTGCACCTGACGGGCCAGAGTTACAATGCTC
GCGACATCATCCGGAACATCTTCTCGCCGCTGATCGGCGTGCTGTCCAGT
CCACAGGCGGACGAGATTTGCCACCGGAACAACCTCTCCTTCGTGGAACT
CCTGCAGCCGTTCGCAAAGTTGCCAAATGATGCACACTTTCGCGACGTGT
CCGGAACGAGTGTATCGGTGCGTGGACTCCGTCTCAATTTCTGTGATGTG
GACTGGCGGCCGCCGCAAACAATTTTGGCCAGGAAGATGCTCAACGAGTC
TGTGACCAACGCCCATAATGACAAAACCAGACTGGCCACCATAGCTGGCA
TAGACCTTGAGTTACCCACATCGGAACCATGGTTCGAGCAGTGGCGTGAG
ACCTTTTTAACTGTGCAATTTCCGGCGGATCATGAGTTCACCCGCCATCT
ATTAAGTTGTTTGCTAGTGCTATCCAGCGCAGATCCCCAGATCGTGGAGA
CGGCCCACAAACTGGGACAACGTGTGCAGCAGATGCAGAGCATCACGCCC
CAAAAACTGCCCAAGTGGTTCCATCCCACCGAGGTCCTCAATAGTTACGT
AGTGCTGCACGAGGCTAGCCAGGGAGACTTGTCCAAAGCACAGCAGGGAT
TCGAGCTGCTCAAATCCACGTTCGGAGACAGCAAGTGTTTTTTGGTGTCG
ATCAACTCGATGGATTCTCAGGGTGCAGCTGAGGTTCCAGATCACTGGGC
AACGTTTATTAAAAGACAGCCTAAAAGTGATCCAAATCTACCCTCCACTG
ATCTTAGTGCACCGAAATCGCCACAGGAAGCGGTTTCTGTAATAAGTATG
CCTGCTATGCAAATGTCACAGCTCCTGGAAGGAGTCAGTGCTCAAGATAG
CGATCTGGCCATGCTTCATCCGCTGAGTCCCATGCAGGAAAGCGCCACAG
AGGCGATTAATTCGAAATTTAGCATCAGCAGCGAGAGTATTGCCTCTCAA
ACAATCAATCCCAATGTTTGGGGAAATGAATTAGAGGCGGATGCACCTCA
CGGCGGATGTCTTACCAGTCGAGACATTGACAACCTACGACACTTTGTGC
AGGACTATGCTGTTCGAGCTTTGATTCCCTATATCGAGCATCTGGTGGCT
ATTCTCGCCGAGGGAGTGACGAACAAAAAGGGTGTCAGCAAGTCGCTATT
GAGCGCTACGAAACGATGGTTTGTCACTAGCAAGCCGGGAGCAGGAGCAA
ACAATCAAAATGCAGTCATCTACACCAATGAATCTGCGGAGCTCCAAACA
CGAAAGTTGGGCGATCTCTACTTCATGTTTGGTCACTACAATTTAGCTTT
CCAATCCTACCACCAAGCCAAGCGAGACTTCAATGCGGATTCAGCTTGGC
AATACTATGCGGGAGCCCTGGAAATGGCTGCCCTATCCGCCTTCATGCTG
GGTACTGCTCAAAGAAAGACATATGACTACATGGAGGATGCAATTGTGTG
TTATCTCACAGTGTGCAAATTGCAGCAATTTGCGACCAGAGCTACGCTCC
TAAGCATGGAATGTTTAAAAACAGCACGACTATATAGTGAAGTAGCCAAG
CAATTGATTCGCATGACCAACGAGGAATCAGATCTTCGCTCAGCCCTCTT
GCTGGAGCAGGCAGCCTACTGTTTTCTGGTGACCCAACCGCCAATGCACA
GGAAGTATGCCTTCCATATCGTGCTGGCCGGGAATCGTTATTCCCGAGCT
GGCCAAAGAAAGCATGCATACCGTTGCTATCGCCAGGCCTATCAGGTTTT
CCAAAAGCGTGAGTGGAGCTTGGCTGAGGATCACATTCAATATACGGTGG
CCAAGCAGGCCTACATGCTGAAACAACTTGAGGAGGCCAGTCGATCTTTC
GCCCATTTACTGAGACCTGGAAGCCTTCAAAGTGCACAGCAGCAGACCAG
TTTCTTAAAGGAGTACATTCAGACTCAGAATGAACTGGTTAAGCGAAGTC
CTGAGCTGGGATTACTACCACATGCCTTACCCCAAGTAGTGCAATCTTCC
GTTCGTGTTCTTACTTTAGTGCAATCACCGTCGGCTGTGGCACCTCATGT
GCCGGCGACTAACATAGACATCAACTCAAATCTGACTGCAGATGAGCCCA
TTTGGAACAAGATTGAAGAGATGCTTGTGATCACTGCTGCCAATAATAAG
CCCTTTGTCTTTAAACCCTCGAGATATTTGTACACTAAACAGCAGCCTGC
ATTGGAAACTCCAGTTGCCGTGCAAGGTGAACCCATTGAGCTTGCTGTAA
CCCTCTCAAATAGCGTTCAATGTAGAATAGCCCTATCCGAGATTGACCTT
CTGTGGAAACTCACACTGGACAATGATGAGGTGCTCTCCAACGCCTGTAC
GTATGAGGAATCATCGGATAGTGCTAATAAAATAGCAGTAGGAGCAGCAA
TCAAAACGAGCTGCATGGCTTCCATCAAATTGGCCGAACAGGCCGAAGAA
ACTTTACACTTTAAGCTGACTCCAAAGTTGACCGGACGTCTGAGTATTTT
GGGAGTCGTTTGTCGAGTAGCAGCCGGTGCGGATCCTGCAGCCAGTCTCC
TGGGTACCTTACAGTTTGAAACCCAAAAGATCAGGCCTCACAATGCCAAG
CAATCATCGCAGACCGTTATGGACAACAGATTAACTATCAAACTGGTTCC
CCAACTGCCCGCCATGAATGTAAGCTTTACTCCCGTTCCCAATCGACTGT
TGGCTGGTGAAATTGTTCCCGTTCATGTAACTCTTCGGAATATGGGAATT
GCTCCGATTGAAGAGATCTATTTGGGATGCGATAACCCGCGCTGTGTGTC
CCTTTTGGATCAGCACAGCCAAATGCCACTGGCTATGATGAGTTCTCTTC
GCAATCTTTCCAATGACAAGCTAGTAAAGGATAAGGAAATTCGAGGACAG
CGAGTATATCGATTACTTAACCGGCCTGGGCTGGCTGCCTTAGACGCCCA
GCAAGTTCAAACCATCTCCTTGTGGGTGCAGGCTCCACACCAGGCGGGAC
CCTTTACCTTACGCCTTCTATTTTATTACTCATTGCCAACGGTGGCAAAT
TCACCCATTAAATATCGATTGGTTCGGCATATTTGGCAGCTGCAGGTAGA
GAGTTGCCTGCAGGCAGACTCCACTTGTGTGGTCAGCAATGCGGTTACTA
ATGAATTGGGACTAGATGTGAACGTTAGGAACCAACATGCAGTAGAGGGA
ACGGAAGTGTACATCAACTCTATTTCATTGTACTCCACGGAATTTAAGTT
GAATCCCGATAGGTTACACATAATGAACAGTATGGGAGTCAGCCCAGGAC
AGGCTGGAGCACAGTGCCTCAAGTCTTCCATTTGCTGCAATTTTCAGTGC
CGCCTTCTCGAGAAAGAAACACAAGAAGAATATAAAGACATTCCATCGAT
TAAAACATTGCTTCATTCGCGACTTTCCCATTTAAAGATCCTGCCTGCCC
AGCACGCTCAGCAAGTGGAGCAGCACATGCCTCCGATACACGACCCGCAC
AGCTTTCTCACCAACGAAGAGACGGTGTATTTCAATACCAACATCTCCAC
GGAAGAGTTCAACGCAAGTGTAGCTGACTATGTACCGCACGCCACATTGG
TCCTAAGTTGGAGCGCCCTAGTAGCTAGGGAGGAGGGGCAGCGCTTGGCC
TGTGGCCTGCACTTCATAAAGCTTTACAAACTATTTGAGACTGGCCACTG
TCCAGCGGCGCCAACAGCTTCTTTCCTACGAAGAAGACATTCCTCTGACG
ACACCTTAGATAACCGACGGGAGTTTCCACTACCTGAGGGAGCGCTAAAT
AATGAGGATGCTTGGCAGCCCCTGGCGGATGCTGATGAAGAAGACTACTG
GGAGCCCAATGAAAACTATGTGGGCCAACGGTGTCTACTGGAGGATGAGA
GCTTTGTAATGGCAGTTAAAGCTGCAAGCTTTCTAGACCAT
BO31751.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:16:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| l(3)76BDm-RB | 3960 | CG8793-PB | 1..3957 | 17..3973 | 19755 | 99.9 | Plus |
| l(3)76BDm-RA | 3960 | CG8793-PA | 1..3957 | 17..3973 | 19755 | 99.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:16:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| l(3)76BDm-RB | 4347 | CG8793-RB | 77..4033 | 17..3973 | 19755 | 99.9 | Plus |
| l(3)76BDm-RA | 4094 | CG8793-RA | 77..4033 | 17..3973 | 19755 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:16:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 19616840..19617770 | 1269..339 | 4640 | 99.9 | Minus |
| 3L | 28110227 | 3L | 19615010..19615922 | 2894..1982 | 4565 | 100 | Minus |
| 3L | 28110227 | 3L | 19613741..19614393 | 3973..3321 | 3250 | 99.8 | Minus |
| 3L | 28110227 | 3L | 19616016..19616479 | 1982..1519 | 2320 | 100 | Minus |
| 3L | 28110227 | 3L | 19614524..19614949 | 3320..2895 | 2130 | 100 | Minus |
| 3L | 28110227 | 3L | 19616534..19616782 | 1518..1270 | 1245 | 100 | Minus |
| 3L | 28110227 | 3L | 19618280..19618445 | 182..17 | 830 | 100 | Minus |
| 3L | 28110227 | 3L | 19617824..19617986 | 344..182 | 815 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 11:16:38 has no hits.
BO31751.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-15 10:36:10 Download gff for
BO31751.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| l(3)76BDm-RA | 73..4029 | 17..3975 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:18:49 Download gff for
BO31751.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| l(3)76BDm-RA | 77..4033 | 17..3975 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:39:32 Download gff for
BO31751.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| l(3)76BDm-RA | 77..4033 | 17..3975 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:39:32 Download gff for
BO31751.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 19613739..19614393 | 3321..3975 | 99 | <- | Minus |
| 3L | 19614524..19614949 | 2895..3320 | 100 | <- | Minus |
| 3L | 19615010..19615922 | 1982..2894 | 100 | <- | Minus |
| 3L | 19616017..19616479 | 1519..1981 | 100 | <- | Minus |
| 3L | 19616534..19616782 | 1270..1518 | 100 | <- | Minus |
| 3L | 19616840..19617764 | 345..1269 | 99 | <- | Minus |
| 3L | 19617824..19617985 | 183..344 | 100 | <- | Minus |
| 3L | 19618280..19618445 | 17..182 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:18:49 Download gff for
BO31751.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 19609634..19609882 | 1270..1518 | 100 | <- | Minus |
| arm_3L | 19606839..19607493 | 3321..3975 | 99 | <- | Minus |
| arm_3L | 19607624..19608049 | 2895..3320 | 100 | <- | Minus |
| arm_3L | 19608110..19609022 | 1982..2894 | 100 | <- | Minus |
| arm_3L | 19609117..19609579 | 1519..1981 | 100 | <- | Minus |
| arm_3L | 19609940..19610864 | 345..1269 | 99 | <- | Minus |
| arm_3L | 19610924..19611085 | 183..344 | 100 | <- | Minus |
| arm_3L | 19611380..19611545 | 17..182 | 100 | | Minus |
BO31751.pep Sequence
Translation from 16 to 3991
> BO31751.pep
MLHLTGQSYNARDIIRNIFSPLIGVLSSPQADEICHRNNLSFVELLQPFA
KLPNDAHFRDVSGTSVSVRGLRLNFCDVDWRPPQTILARKMLNESVTNAH
NDKTRLATIAGIDLELPTSEPWFEQWRETFLTVQFPADHEFTRHLLSCLL
VLSSADPQIVETAHKLGQRVQQMQSITPQKLPKWFHPTEVLNSYVVLHEA
SQGDLSKAQQGFELLKSTFGDSKCFLVSINSMDSQGAAEVPDHWATFIKR
QPKSDPNLPSTDLSAPKSPQEAVSVISMPAMQMSQLLEGVSAQDSDLAML
HPLSPMQESATEAINSKFSISSESIASQTINPNVWGNELEADAPHGGCLT
SRDIDNLRHFVQDYAVRALIPYIEHLVAILAEGVTNKKGVSKSLLSATKR
WFVTSKPGAGANNQNAVIYTNESAELQTRKLGDLYFMFGHYNLAFQSYHQ
AKRDFNADSAWQYYAGALEMAALSAFMLGTAQRKTYDYMEDAIVCYLTVC
KLQQFATRATLLSMECLKTARLYSEVAKQLIRMTNEESDLRSALLLEQAA
YCFLVTQPPMHRKYAFHIVLAGNRYSRAGQRKHAYRCYRQAYQVFQKREW
SLAEDHIQYTVAKQAYMLKQLEEASRSFAHLLRPGSLQSAQQQTSFLKEY
IQTQNELVKRSPELGLLPHALPQVVQSSVRVLTLVQSPSAVAPHVPATNI
DINSNLTADEPIWNKIEEMLVITAANNKPFVFKPSRYLYTKQQPALETPV
AVQGEPIELAVTLSNSVQCRIALSEIDLLWKLTLDNDEVLSNACTYEESS
DSANKIAVGAAIKTSCMASIKLAEQAEETLHFKLTPKLTGRLSILGVVCR
VAAGADPAASLLGTLQFETQKIRPHNAKQSSQTVMDNRLTIKLVPQLPAM
NVSFTPVPNRLLAGEIVPVHVTLRNMGIAPIEEIYLGCDNPRCVSLLDQH
SQMPLAMMSSLRNLSNDKLVKDKEIRGQRVYRLLNRPGLAALDAQQVQTI
SLWVQAPHQAGPFTLRLLFYYSLPTVANSPIKYRLVRHIWQLQVESCLQA
DSTCVVSNAVTNELGLDVNVRNQHAVEGTEVYINSISLYSTEFKLNPDRL
HIMNSMGVSPGQAGAQCLKSSICCNFQCRLLEKETQEEYKDIPSIKTLLH
SRLSHLKILPAQHAQQVEQHMPPIHDPHSFLTNEETVYFNTNISTEEFNA
SVADYVPHATLVLSWSALVAREEGQRLACGLHFIKLYKLFETGHCPAAPT
ASFLRRRHSSDDTLDNRREFPLPEGALNNEDAWQPLADADEEDYWEPNEN
YVGQRCLLEDESFVMAVKAASFLDH
BO31751.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:31:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| l(3)76BDm-PB | 1319 | CG8793-PB | 1..1319 | 1..1319 | 6820 | 100 | Plus |
| l(3)76BDm-PA | 1319 | CG8793-PA | 1..1319 | 1..1319 | 6820 | 100 | Plus |
