BO31758.complete Sequence
2824 bp assembled on 2012-09-18
GenBank Submission: KX794304
> BO31758.complete
GAAGTTATCAGTCGACATGGGGCGGCTAACCATTTGGTTCCTACTGGGAC
TAACGTTAATCGCCGTTTCCAATAATGTTGGGTTTGTCAATGCCGATGTC
GGACCAAGCGAATCAGAATGTCGACCCTACATTGAAAAGGCTATTCATGA
ATTGAAAACAGATGGTGTCAGGGATGGATCTGGAGAACTGCAATCCGATC
AGCCACGTGGGGACGACGACGATGACGACGATGATGAGGACGCGAAAAGT
GCCAACGATTTGGATGGAGATGGAATACCCGATGACGAGGACGATGATAT
CGATGGGGACGGCATTCCGAACGAAAAGGACGATGATATCGATGGAGATG
GCATACCGAACGACGAGGATGATGACATCGATGGCGATGGCATCCCGAAT
GAAGATGACGACGATATTGATGGGGATGGTGTGCCCAACTCCAAGGACGA
GGACATCGATGGGGATGGTGTGCCCAACTCCAAGGACGAAGACATCGATG
GCGATGGCAAGGCAAATCACGAGGATGATGATCTAGATGGTGATGGCACT
CCAAATCATGAGGACGAAGATCTCGACGGGGACGGTGTGCCCAACGAGGA
AGATGATGACCTCGATGGTGATGGCAAAATAAATCACGAGGATGAAGACC
TCGATGGTGATGGAGTGAAAAATGACGAAGACGAGGATCTGGATGGAGAT
GGCAAAGTAAATCACGAGGACGAAGATCTTGATGGAGATGGCGTGAAGAA
TGAAAAGGACGACGATTTGGATGGCGATGGTACCAACAATTCTCAGGATG
AAGACCTAGATGGTGATGGTGTGCCAAATGAAAAGGATGACGATCTGGAT
GGAGATGGCATCCTGAACGAGCACGACGGTGATGTGGATGGCGATGGAGT
TCCCAATGAACACGATCACAAGGATAGCGGTGAGAATGCCGATGATGATG
ATGACGACGATGATGAGGATGACAAGGAGGCGGTCAAGAAGCGAAGCAAA
CGTGAAGTGGATGCTGCTCCTGTTCTGGACATTGAGGCTCCACCAAGTCC
CGCCGAAGAATTTCCCGTAGAGGAAGAAATCGTCAAGGAGGCATCTGCCG
AAGAGGAAGCCGAAGTTGAGGCTGTGAAAGAAGAGGAGCCCGAGCAGGAA
GCTGTTCAGGAACCCGAACCGGAACCGGTAGTGGAACCAGAAGCGGAAGT
GCAACCCGAACCAGTCCAGCAGGAAGAAGAGAAGGCCGAATCTGCGGAAG
CGAAGGAGGAGGAAAAGCCAGCACCAGTTGAGGAGGCTGAGGCTGAGGAG
GAATCTGTGCAGCCTGAAGCCGCTCCCAAAGAACCCGAAGCTGTCCAGGA
GGAAGCACAGGAAGATGAACCACAAACCGATGGCGCACAAGATGCCGCTG
ATGATGATGATGACACCAAGCCAGAGGATGAGCTTCTTTGGGAAGGACAC
ATTCCCGAGAACCGACGCAGTCGCCAGCACATCACCGAACTGCTCCAGTT
GGATGAGGAGTTCAATGCCCGTGAGAAGGCTACCGACAACGTTGCTGAGA
TCATCCTGCGGGACATTAAGCGCATCTACGAGAATGCTGTCAAGCCCCTG
GAGACCCTGTACAAATATCGCGATCTGAGCAACCGCCACTTCAGCGATCC
CGAGATCTTCTCAAAGCCACTGATTCTATTCATGGGTCCTTGGTCCGGCG
GCAAGTCGTCCATTCTTAACTATCTGACCGACAATGAGTACACGCCGAAC
TCTTTGAGAACTGGTGCTGAACCCTCTCCGGCCTACTTCAACATTCTGAT
GTGGGGCAATGAGACGGAGGTTCTGGACGGCACTCAACTGGCGGCGGACT
ACACCTTTGCCGGCCTCCAGAAGTTCGGTCAGGGATTGGAGGAGCGCCTG
CGTGGTCTGAAGATGAAGAGCAAGATCCTCGAAAAGGTCAACATCGTCGA
GATACCCGGCATTCTAGAGGTGCGCAAGCAAGTGTCCCGCGTCTTCCCCT
TCAACGACGCCTGCCAGTGGTTCATCGATCGGGCGGACATCATCTTCTTG
GTCTACGACCCGGCCAAGTTGGATGTGGGCCCCGAGACGGAGGCCATTCT
CGACCAGCTGAAGGGGCGCGAGTACCAGACGCGCATCATCCTCAACAAGG
CAGACACCGTCAAGCCCGAGGAGTTGTTGCGCGTCCAGGGCGCCCTCATC
TGGAACATCTCGCCATTGATGTCCTCCGCCCAGCCGCCGCTGATGTACAC
CACCTCGCTGTGGACCCATCCCTACCAGGATGGTGCTCCCGCCCGCCTGC
TGCTCGCCCAGGAGCGCGCCTTCTTGCGCGACCTGCGCACAGCCATCGAC
AAGCGCATCGAGCACAAGATCGCCAGCGCACGTCGTTTTGCGGTGCGTGT
GCGCAACCACGCCAAGATGGTGGACTGCTACCTGAACACGTTCAACAACC
ACAAGACGCTGTTTGGCAACAAGAAGCGCATCGCCGATGACATCATCGAT
CATCCGCAGAACTACCACATCTACGAGGGACTCTCCACACTGACGAACAT
CTCGCGCTACGATCTTCCGGATCCGGAAGTCTACCGCGACTTCTTCCGCC
TGAATCCGCTGTACGAGTTCAAGAAGCTGAGGGACACCTGCACCTACTTC
CGCGGCTGTCCGATCACCAAACTGGACCTGGCCATTGCCTACGAACTGCC
CGAATTGGCCGGCAAGTACAAGAAGATGTCCGAGGCTGCGTTGGCCGCCA
TTGAGGCCCAACAGCAGGATGGAACCATAGGCCAGGCCGAGCCTAAGAGG
ACGAGTGCAAGCTTTCTAGACCAT
BO31758.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 13:10:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9297-RA | 2793 | CG9297-PA | 1..2790 | 17..2806 | 13950 | 100 | Plus |
| CG9297-RE | 2859 | CG9297-PE | 286..2856 | 236..2806 | 12855 | 100 | Plus |
| CG9297-RD | 2859 | CG9297-PD | 286..2856 | 236..2806 | 12855 | 100 | Plus |
| CG9297-RE | 2859 | CG9297-PE | 1..220 | 17..236 | 1100 | 100 | Plus |
| CG9297-RA | 2793 | CG9297-PA | 247..764 | 341..858 | 565 | 73.9 | Plus |
| CG9297-RA | 2793 | CG9297-PA | 325..842 | 263..780 | 565 | 73.9 | Plus |
| CG9297-RE | 2859 | CG9297-PE | 313..830 | 341..858 | 565 | 73.9 | Plus |
| CG9297-RE | 2859 | CG9297-PE | 391..908 | 263..780 | 565 | 73.9 | Plus |
| CG9297-RA | 2793 | CG9297-PA | 272..687 | 327..742 | 490 | 74.5 | Plus |
| CG9297-RA | 2793 | CG9297-PA | 311..726 | 288..703 | 490 | 74.5 | Plus |
| CG9297-RE | 2859 | CG9297-PE | 338..753 | 327..742 | 490 | 74.5 | Plus |
| CG9297-RE | 2859 | CG9297-PE | 377..792 | 288..703 | 490 | 74.5 | Plus |
| CG9297-RA | 2793 | CG9297-PA | 272..688 | 444..860 | 450 | 73.9 | Plus |
| CG9297-RA | 2793 | CG9297-PA | 428..844 | 288..704 | 450 | 73.9 | Plus |
| CG9297-RE | 2859 | CG9297-PE | 338..754 | 444..860 | 450 | 73.9 | Plus |
| CG9297-RE | 2859 | CG9297-PE | 494..910 | 288..704 | 450 | 73.9 | Plus |
| CG9297-RA | 2793 | CG9297-PA | 247..530 | 380..663 | 355 | 75 | Plus |
| CG9297-RA | 2793 | CG9297-PA | 364..647 | 263..546 | 355 | 75 | Plus |
| CG9297-RE | 2859 | CG9297-PE | 313..596 | 380..663 | 355 | 75 | Plus |
| CG9297-RE | 2859 | CG9297-PE | 430..713 | 263..546 | 355 | 75 | Plus |
| CG9297-RA | 2793 | CG9297-PA | 313..493 | 680..860 | 185 | 73.5 | Plus |
| CG9297-RA | 2793 | CG9297-PA | 664..844 | 329..509 | 185 | 73.5 | Plus |
| CG9297-RE | 2859 | CG9297-PE | 379..559 | 680..860 | 185 | 73.5 | Plus |
| CG9297-RE | 2859 | CG9297-PE | 730..910 | 329..509 | 185 | 73.5 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 13:10:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9297-RA | 4014 | CG9297-RA | 231..3020 | 17..2806 | 13950 | 100 | Plus |
| CG9297-RE | 4134 | CG9297-RE | 570..3140 | 236..2806 | 12855 | 100 | Plus |
| CG9297-RD | 4127 | CG9297-RD | 563..3133 | 236..2806 | 12855 | 100 | Plus |
| CG9297-RE | 4134 | CG9297-RE | 285..504 | 17..236 | 1100 | 100 | Plus |
| CG9297-RA | 4014 | CG9297-RA | 477..994 | 341..858 | 565 | 73.9 | Plus |
| CG9297-RA | 4014 | CG9297-RA | 555..1072 | 263..780 | 565 | 73.9 | Plus |
| CG9297-RE | 4134 | CG9297-RE | 597..1114 | 341..858 | 565 | 73.9 | Plus |
| CG9297-RE | 4134 | CG9297-RE | 675..1192 | 263..780 | 565 | 73.9 | Plus |
| CG9297-RA | 4014 | CG9297-RA | 502..917 | 327..742 | 490 | 74.5 | Plus |
| CG9297-RA | 4014 | CG9297-RA | 541..956 | 288..703 | 490 | 74.5 | Plus |
| CG9297-RE | 4134 | CG9297-RE | 622..1037 | 327..742 | 490 | 74.5 | Plus |
| CG9297-RE | 4134 | CG9297-RE | 661..1076 | 288..703 | 490 | 74.5 | Plus |
| CG9297-RA | 4014 | CG9297-RA | 502..918 | 444..860 | 450 | 73.9 | Plus |
| CG9297-RA | 4014 | CG9297-RA | 658..1074 | 288..704 | 450 | 73.9 | Plus |
| CG9297-RE | 4134 | CG9297-RE | 622..1038 | 444..860 | 450 | 73.9 | Plus |
| CG9297-RE | 4134 | CG9297-RE | 778..1194 | 288..704 | 450 | 73.9 | Plus |
| CG9297-RA | 4014 | CG9297-RA | 477..760 | 380..663 | 355 | 75 | Plus |
| CG9297-RA | 4014 | CG9297-RA | 594..877 | 263..546 | 355 | 75 | Plus |
| CG9297-RE | 4134 | CG9297-RE | 597..880 | 380..663 | 355 | 75 | Plus |
| CG9297-RE | 4134 | CG9297-RE | 714..997 | 263..546 | 355 | 75 | Plus |
| CG9297-RA | 4014 | CG9297-RA | 543..723 | 680..860 | 185 | 73.5 | Plus |
| CG9297-RA | 4014 | CG9297-RA | 894..1074 | 329..509 | 185 | 73.5 | Plus |
| CG9297-RE | 4134 | CG9297-RE | 663..843 | 680..860 | 185 | 73.5 | Plus |
| CG9297-RE | 4134 | CG9297-RE | 1014..1194 | 329..509 | 185 | 73.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 13:10:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 13775530..13776177 | 795..1442 | 3240 | 100 | Plus |
| 3R | 32079331 | 3R | 13777251..13777711 | 1935..2395 | 2305 | 100 | Plus |
| 3R | 32079331 | 3R | 13777909..13778323 | 2392..2806 | 2075 | 100 | Plus |
| 3R | 32079331 | 3R | 13776230..13776558 | 1437..1765 | 1630 | 99.7 | Plus |
| 3R | 32079331 | 3R | 13774452..13774737 | 236..521 | 1430 | 100 | Plus |
| 3R | 32079331 | 3R | 13776787..13776966 | 1759..1938 | 885 | 99.4 | Plus |
| 3R | 32079331 | 3R | 13773934..13774018 | 77..161 | 425 | 100 | Plus |
| 3R | 32079331 | 3R | 13774504..13774684 | 327..507 | 425 | 82.3 | Plus |
| 3R | 32079331 | 3R | 13774543..13774723 | 288..468 | 425 | 82.3 | Plus |
| 3R | 32079331 | 3R | 13775091..13775169 | 560..638 | 395 | 100 | Plus |
| 3R | 32079331 | 3R | 13775227..13775305 | 638..716 | 395 | 100 | Plus |
| 3R | 32079331 | 3R | 13775381..13775459 | 716..794 | 395 | 100 | Plus |
| 3R | 32079331 | 3R | 13774309..13774386 | 159..236 | 390 | 100 | Plus |
| 3R | 32079331 | 3R | 13772350..13772410 | 17..77 | 305 | 100 | Plus |
| 3R | 32079331 | 3R | 13774479..13774737 | 380..638 | 275 | 73.7 | Plus |
| 3R | 32079331 | 3R | 13774557..13774684 | 263..390 | 265 | 80.5 | Plus |
| 3R | 32079331 | 3R | 13774479..13774606 | 341..468 | 265 | 80.5 | Plus |
| 3R | 32079331 | 3R | 13774504..13774684 | 444..624 | 260 | 76.2 | Plus |
| 3R | 32079331 | 3R | 13774596..13774725 | 263..392 | 215 | 77.7 | Plus |
| 3R | 32079331 | 3R | 13774798..13774837 | 521..560 | 200 | 100 | Plus |
| 3R | 32079331 | 3R | 13775529..13775595 | 638..704 | 200 | 86.6 | Plus |
| 3R | 32079331 | 3R | 13775228..13775293 | 795..860 | 195 | 86.4 | Plus |
| 3R | 32079331 | 3R | 13774503..13774645 | 560..702 | 190 | 75.5 | Plus |
| 3R | 32079331 | 3R | 13774545..13774725 | 680..860 | 185 | 73.5 | Plus |
Blast to na_te.dros performed on 2014-11-28 13:10:51 has no hits.
BO31758.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-09-18 16:23:17 Download gff for
BO31758.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9297-RA | 231..3020 | 17..2808 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:51:50 Download gff for
BO31758.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9297-RA | 231..3020 | 17..2808 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:22:46 Download gff for
BO31758.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9297-RA | 231..3020 | 17..2808 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:22:46 Download gff for
BO31758.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 13776792..13776964 | 1764..1936 | 100 | -> | Plus |
| 3R | 13772350..13772410 | 17..77 | 100 | -> | Plus |
| 3R | 13773935..13774018 | 78..161 | 100 | -> | Plus |
| 3R | 13774312..13774386 | 162..236 | 100 | -> | Plus |
| 3R | 13774453..13774737 | 237..521 | 100 | -> | Plus |
| 3R | 13774799..13774837 | 522..560 | 100 | -> | Plus |
| 3R | 13775092..13775169 | 561..638 | 100 | -> | Plus |
| 3R | 13775228..13775305 | 639..716 | 100 | -> | Plus |
| 3R | 13775382..13775459 | 717..794 | 100 | -> | Plus |
| 3R | 13775530..13776176 | 795..1441 | 100 | -> | Plus |
| 3R | 13776235..13776556 | 1442..1763 | 100 | -> | Plus |
| 3R | 13777253..13777708 | 1937..2392 | 100 | -> | Plus |
| 3R | 13777910..13778323 | 2393..2808 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:51:50 Download gff for
BO31758.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 9600950..9601027 | 639..716 | 100 | -> | Plus |
| arm_3R | 9601104..9601181 | 717..794 | 100 | -> | Plus |
| arm_3R | 9602514..9602686 | 1764..1936 | 100 | -> | Plus |
| arm_3R | 9600175..9600459 | 237..521 | 100 | -> | Plus |
| arm_3R | 9600521..9600559 | 522..560 | 100 | -> | Plus |
| arm_3R | 9598072..9598132 | 17..77 | 100 | -> | Plus |
| arm_3R | 9599657..9599740 | 78..161 | 100 | -> | Plus |
| arm_3R | 9600034..9600108 | 162..236 | 100 | -> | Plus |
| arm_3R | 9600814..9600891 | 561..638 | 100 | -> | Plus |
| arm_3R | 9601252..9601898 | 795..1441 | 100 | -> | Plus |
| arm_3R | 9601957..9602278 | 1442..1763 | 100 | -> | Plus |
| arm_3R | 9602975..9603430 | 1937..2392 | 100 | -> | Plus |
| arm_3R | 9603632..9604045 | 2393..2808 | 99 | | Plus |
BO31758.pep Sequence
Translation from 16 to 2824
> BO31758.pep
MGRLTIWFLLGLTLIAVSNNVGFVNADVGPSESECRPYIEKAIHELKTDG
VRDGSGELQSDQPRGDDDDDDDDEDAKSANDLDGDGIPDDEDDDIDGDGI
PNEKDDDIDGDGIPNDEDDDIDGDGIPNEDDDDIDGDGVPNSKDEDIDGD
GVPNSKDEDIDGDGKANHEDDDLDGDGTPNHEDEDLDGDGVPNEEDDDLD
GDGKINHEDEDLDGDGVKNDEDEDLDGDGKVNHEDEDLDGDGVKNEKDDD
LDGDGTNNSQDEDLDGDGVPNEKDDDLDGDGILNEHDGDVDGDGVPNEHD
HKDSGENADDDDDDDDEDDKEAVKKRSKREVDAAPVLDIEAPPSPAEEFP
VEEEIVKEASAEEEAEVEAVKEEEPEQEAVQEPEPEPVVEPEAEVQPEPV
QQEEEKAESAEAKEEEKPAPVEEAEAEEESVQPEAAPKEPEAVQEEAQED
EPQTDGAQDAADDDDDTKPEDELLWEGHIPENRRSRQHITELLQLDEEFN
AREKATDNVAEIILRDIKRIYENAVKPLETLYKYRDLSNRHFSDPEIFSK
PLILFMGPWSGGKSSILNYLTDNEYTPNSLRTGAEPSPAYFNILMWGNET
EVLDGTQLAADYTFAGLQKFGQGLEERLRGLKMKSKILEKVNIVEIPGIL
EVRKQVSRVFPFNDACQWFIDRADIIFLVYDPAKLDVGPETEAILDQLKG
REYQTRIILNKADTVKPEELLRVQGALIWNISPLMSSAQPPLMYTTSLWT
HPYQDGAPARLLLAQERAFLRDLRTAIDKRIEHKIASARRFAVRVRNHAK
MVDCYLNTFNNHKTLFGNKKRIADDIIDHPQNYHIYEGLSTLTNISRYDL
PDPEVYRDFFRLNPLYEFKKLRDTCTYFRGCPITKLDLAIAYELPELAGK
YKKMSEAALAAIEAQQQDGTIGQAEPKRTSASFLDH
BO31758.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:36:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9297-PA | 930 | CG9297-PA | 1..930 | 1..930 | 4927 | 100 | Plus |
| CG9297-PE | 952 | CG9297-PE | 1..952 | 1..930 | 4894 | 97.7 | Plus |
| CG9297-PD | 952 | CG9297-PD | 1..952 | 1..930 | 4894 | 97.7 | Plus |
| CG9297-PC | 952 | CG9297-PC | 1..952 | 1..930 | 4894 | 97.7 | Plus |
| CG9297-PB | 952 | CG9297-PB | 1..952 | 1..930 | 4894 | 97.7 | Plus |
