Clone BO31771 Report

Search the DGRC for BO31771

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:317
Well:71
Vector:pDNR-Dual
Associated Gene/TranscriptCG42345-RF
Protein status:BO31771.pep: Imported from assembly
Sequenced Size:2281

Clone Sequence Records

BO31771.complete Sequence

2281 bp assembled on 2012-05-15

GenBank Submission: KX795294

> BO31771.complete
GAAGTTATCAGTCGACATGTACTCGTTTTTTGATCATTCAAAAAATCAAC
CAGATCTTACACCAATGGGGTCCTTCTGGCAGCAACATGTGGCCACTCCT
AGTAGTTCAACTCCATTCGATTCACCATTTTTTTCGGCAACACACGGCCT
TGTGCAGACTCACCCGTCTATAGGTGGAAGCCACTCTGGGCCCGCTCCAT
TAAATGGCAATAGCCTTGGGTCTGGAGCTCCATCCTCAATCCTAGCTGGT
ACTAAGCCAGCCCTAACCGCTGGAAGCGGTTACCTAAACTCACGCGGGAG
TCTACCGACCTCTGCACGTTATCCAGCTAATAAGATCACAGGAACCGTCG
TGGAACCCAACCCAAAATCTCCATTCCGCCACTTAGATTTCTCTACTAGT
GCAACTGCCGAGCTGCGGCGCAATCCTGCGCTATCTGCTCCTGATGAATG
TGCACGCGCTTGTCGCGAAGGCGAGCCTCCGAGAATTTGCTACTATCATT
TTACGTTGGAATACTACACAGTATTGGGAGCTGCGTGTCAAGTATGTACT
CCAAACGCAACGAATACGGTTTGGAGCCATTGTCAGTGTGTCTTAGCTGA
TGGAGTTGAACGTGGAATTCTAACTGCGAATCGTATGATACCCGGGCCAA
GCATTCAAGTGTGTGAAAACGACAAAGTCGTTATTGATGTGGAGAACCAT
ATGGAGGGAATGGAAGTAACTATACACTGGCACGGTATATGGCAACGTGG
ATCGCAGTATTATGATGGGGTGCCCTTCGTTACTCAGTGCCCCATTCAGC
AGGGTAATACCTTCCGTTATCAGTGGACAGGAAACGCTGGGACACATTTT
TGGCATGCTCATACCGGTCTACAGAAACTAGATGGACTCTACGGCAGCGT
CGTGGTTCGACAGCCACCATCAAGGGACCCTAACTCCCATTTATATGATT
TTGATTTAACAACACATATAATGCTTATCAGTGATTGGTTGCATGAAGAT
GCAGCAGAGAGATATCCTGGACGCTTGGCTGTTAACACAGGCCAAGATCC
GGAGTCTATGTTGATTAACGGAAAAGGCCAGTTTCGTGACCCGAACACTG
GATTTATGACTAATACTCCGTTGGAAATATTCACAATTACGCCAGGACGT
CGTTACCGCTTTCGAATGATAAATGCATTTGCTTCAGTCTGTCCAGCACA
GGTAACAATTGAGGGTCACGGCATGACGGTTATAGCAACCGATGGTGAGC
CTGTGCATCCTGTTGATGTAAATACAATCATTTCCTTTTCAGGTGAGCGC
TACGATTTTGTTATAAGCGCCGATCAACCTGTTGGAGCTTATTGGATACA
GTTACGTGGACTTGGTGAGTGTGGTATTCGTAGAGCTCAACAACTGGCTA
TCCTGCGTTACGCTCGTGGACCTTATCAGCCAGCATCTTCTCCGCCAACA
TACGATGTTGGAATACCGCAAGGAGTCGTTATGAATCCTTTGGACGCCCA
ATGTAACCGTCAACGTAACGATGCCATATGCGTAAGCCAACTTAAAAACG
CTCTTGAGATTGATCGTGGTATATTGGCAGAGAAGCCAGACGTAAAAATA
TTTTTACCTTTCCGGTTCTTTGTATACCGGGCTGAAGATCTGTTCCAGCC
AAACACTTATAACAGGTTTTTAGTGGCACCCACCGGCGACCATGTAATTT
CACTTATCGATGAAATTTCATACCTATCGGCTCCAGCGCCACTGACTTCC
CAATATAATGATATAAACCCAGATCAGTTTTGTAACGGGGACAATCGTCC
CGCAGATTGTGGGCCAAACTGTATGTGTACTCATAAAATAGATATTCCAC
TTAACGCAATCGTGGAAGTCGTTTTAGTCGATGAAGTTCAACAACCCAAT
TTGTCACATCCTTTCCATTTGCACGGTTACGGGTTCAGTGTCATTGGTAT
TGGCCGTTCTCCTGATTCTTCAGTGAAAAAGATCAATTTAAAGCACGCCT
TGGACCTAGATAGGCGGGGACTTTTACACCGTCAGTACAATTTACCGCCT
ACTAAGGATACAATTGCAGTACCAAATAACGGCTATGTGGTTCTGCGGTT
TAGGGCTGACAATCCTGGCTTCTGGCTATTCCACTGTCATTTTCTTTTCC
ACATTGTTATTGGCATGAACTTGATTTTGCAAGTCGGCACTAACGCTGAT
CTGCCACCCGTTCCGCCAGGATTCCCAACATGTGGAGACCACACACCATC
CATTCCAATAAATGCAAGCTTTCTAGACCAT

BO31771.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:17:07
Subject Length Description Subject Range Query Range Score Percent Strand
laccase2-RF 2250 CG42345-PF 1..2247 17..2263 11235 100 Plus
laccase2-RA 2355 CG42345-PA 131..2352 42..2263 11110 100 Plus
laccase2-RE 2355 CG42345-PE 131..2016 42..1927 8350 96.2 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:17:08
Subject Length Description Subject Range Query Range Score Percent Strand
laccase2-RF 2869 CG42345-RF 298..2544 17..2263 11235 100 Plus
laccase2-RA 3561 CG42345-RA 339..2560 42..2263 11110 100 Plus
laccase2-RE 3645 CG32838-RA 339..2224 42..1927 8350 96.2 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:17:05
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 5435652..5436414 532..1294 3815 100 Plus
2R 25286936 2R 5423750..5424239 42..531 2450 100 Plus
2R 25286936 2R 5446533..5446766 1885..2118 1170 100 Plus
2R 25286936 2R 5440852..5441070 1668..1886 1080 99.5 Plus
2R 25286936 2R 5440610..5440805 1478..1673 980 100 Plus
2R 25286936 2R 5439568..5439756 1291..1479 945 100 Plus
2R 25286936 2R 5446827..5446973 2117..2263 735 100 Plus
2R 25286936 2R 5454528..5454674 1781..1927 240 77.6 Plus
Blast to na_te.dros performed on 2014-11-28 11:17:06 has no hits.

BO31771.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-15 10:36:13 Download gff for BO31771.complete
Subject Subject Range Query Range Percent Splice Strand
CG42345-RF 42..2288 17..2265 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:18:59 Download gff for BO31771.complete
Subject Subject Range Query Range Percent Splice Strand
laccase2-RF 298..2544 17..2265 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:39:43 Download gff for BO31771.complete
Subject Subject Range Query Range Percent Splice Strand
laccase2-RF 298..2544 17..2265 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:39:43 Download gff for BO31771.complete
Subject Subject Range Query Range Percent Splice Strand
2R 5416393..5416417 17..41 100 -> Plus
2R 5423750..5424239 42..531 100 -> Plus
2R 5435652..5436412 532..1292 100 -> Plus
2R 5439570..5439754 1293..1477 100 -> Plus
2R 5440610..5440805 1478..1673 100 -> Plus
2R 5440858..5441070 1674..1886 100 -> Plus
2R 5446535..5446765 1887..2117 100 -> Plus
2R 5446828..5446973 2118..2265 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:18:59 Download gff for BO31771.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 1303898..1303922 17..41 100 -> Plus
arm_2R 1311255..1311744 42..531 100 -> Plus
arm_2R 1323157..1323917 532..1292 100 -> Plus
arm_2R 1327075..1327259 1293..1477 100 -> Plus
arm_2R 1328115..1328310 1478..1673 100 -> Plus
arm_2R 1328363..1328575 1674..1886 100 -> Plus
arm_2R 1334040..1334270 1887..2117 100 -> Plus
arm_2R 1334333..1334478 2118..2265 98   Plus

BO31771.pep Sequence

Translation from 16 to 2281

> BO31771.pep
MYSFFDHSKNQPDLTPMGSFWQQHVATPSSSTPFDSPFFSATHGLVQTHP
SIGGSHSGPAPLNGNSLGSGAPSSILAGTKPALTAGSGYLNSRGSLPTSA
RYPANKITGTVVEPNPKSPFRHLDFSTSATAELRRNPALSAPDECARACR
EGEPPRICYYHFTLEYYTVLGAACQVCTPNATNTVWSHCQCVLADGVERG
ILTANRMIPGPSIQVCENDKVVIDVENHMEGMEVTIHWHGIWQRGSQYYD
GVPFVTQCPIQQGNTFRYQWTGNAGTHFWHAHTGLQKLDGLYGSVVVRQP
PSRDPNSHLYDFDLTTHIMLISDWLHEDAAERYPGRLAVNTGQDPESMLI
NGKGQFRDPNTGFMTNTPLEIFTITPGRRYRFRMINAFASVCPAQVTIEG
HGMTVIATDGEPVHPVDVNTIISFSGERYDFVISADQPVGAYWIQLRGLG
ECGIRRAQQLAILRYARGPYQPASSPPTYDVGIPQGVVMNPLDAQCNRQR
NDAICVSQLKNALEIDRGILAEKPDVKIFLPFRFFVYRAEDLFQPNTYNR
FLVAPTGDHVISLIDEISYLSAPAPLTSQYNDINPDQFCNGDNRPADCGP
NCMCTHKIDIPLNAIVEVVLVDEVQQPNLSHPFHLHGYGFSVIGIGRSPD
SSVKKINLKHALDLDRRGLLHRQYNLPPTKDTIAVPNNGYVVLRFRADNP
GFWLFHCHFLFHIVIGMNLILQVGTNADLPPVPPGFPTCGDHTPSIPINA
SFLDH

BO31771.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:31:21
Subject Length Description Subject Range Query Range Score Percent Strand
laccase2-PF 749 CG42345-PF 1..749 1..749 4081 100 Plus
laccase2-PA 784 CG30437-PA 44..784 9..749 4031 99.9 Plus
laccase2-PE 784 CG32838-PA 44..781 9..746 3761 92.5 Plus
laccase2-PD 784 CG42345-PD 44..781 9..746 3701 90.7 Plus
laccase2-PG 784 CG42345-PG 44..781 9..746 3674 89.8 Plus