BO31776.complete Sequence
1318 bp assembled on 2012-04-25
GenBank Submission: KX799203
> BO31776.complete
GAAGTTATCAGTCGACATGTACAGAATAGCTGCCCTTGTGCGGGATCGCG
CCTGTCTCTTCACGTGCCAGCAGGCCTCGCAGAACCTGCAGCAGCAGCAG
CCCCGCTTTTATAGTGCGCCAGGTCGCAGGGCCGGCTTCTTCTCGCAGTT
CTTCGACAACATGAAGGCGGAGATGGATAAGAACAAGGAGATCAAGGACA
ATATCCGAAAGTTCCGTGAGGAGGCCCAGAAGCTGGAAGAATCGGATGCC
CTGAAATCGGCGCGGCAAAAGTTTAACATTGTCGAATCGGAGGCGCAAAA
GTCGTCTAGCATGCTAAAGGAGCAGCTGGGCGCCATCAAGGAGCGCGTAG
GCGATGTTCTGGAGGACGCCAGCAAATCCCACCTGGCCAAAAAGGTTACC
GAGGAGCTCTCGAAGAAGGCTAGGGGGGTCAGCGACACGATCTCCGACAC
CAGTGGCAAGCTGGGCCAGACCAGCGCATTCCAGGCTATCTCTAACACGA
CGACGACCATCAAGAAGGAGATGGACAGCGCGAGCATAGAGAATCGTGTC
TATCGTGCTCCTGCCAAGTTGCGAAAGCGCGTCCAGCTCGTCATGAGCGA
TAGTGATCGCGTTGTGGAGCCCAACACGGAAGCCACTGGTATGGAGCTGC
ACAAGGACTCCAAGTTCTACGAGTCGTGGGAGAACTTCAAGAACAACAAT
ACCTACGTGAACAAGGTGCTTGACTGGAAGGTTAAATACGACGAGTCCGA
GAACCCTGTTATTCGTGCCTCCCGCCTGCTGACCGATAAAGTGTCCGACG
TCATGGGTGGACTCTTTTCAAAGACAGAGCTTTCGGAAACGATGACGGAG
CTGGTGAAAATCGATCCGAGCTTTGATCAGAAGGATTTCCTCCGCGATTG
CGAAACGGACATCATTCCAAATATTCTGGAATCGATTGTCCGTGGGGATC
TGGAGATTCTGAAGGATTGGTGCTTTGAGAGCACTTTCAATATTATCGCA
AATCCCATTAAGGAGGCTAAGAAGGCCGGCGTGTACCTGGACTCCAAGAT
CCTCGACATCGAGAACATTGAACTGGCAATGGGCAAGGTTATGGAGCAGG
GCCCGGTACTGATTATCACGTTCCAAGCCCAGCAGATTATGTGCGTGCGG
GACCAGAAGAGTCAGGTCGTCGAGGGAGATCCGGAGAAGGTGATGCGGGT
TCACTACGTCTGGGTGCTGTGCCGCGACCGCAACGAACTCAACCCCAAGG
CTGCCTGGCGGCTGATGGAGCTGTCCGCCAACAGCTCAGAGCAATTTGTT
GCAAGCTTTCTAGACCAT
BO31776.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 05:47:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11779-RE | 1287 | CG11779-PE | 1..1284 | 17..1300 | 6420 | 100 | Plus |
| CG11779-RB | 1287 | CG11779-PB | 1..1284 | 17..1300 | 6420 | 100 | Plus |
| CG11779-RA | 1380 | CG11779-PA | 90..1377 | 13..1300 | 6410 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:48:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11779-RE | 2474 | CG11779-RE | 151..1435 | 16..1300 | 6425 | 100 | Plus |
| CG11779-RB | 2679 | CG11779-RB | 356..1640 | 16..1300 | 6425 | 100 | Plus |
| CG11779-RA | 2281 | CG11779-RA | 263..1550 | 13..1300 | 6410 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 05:47:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 19155136..19155798 | 1300..638 | 3315 | 100 | Minus |
| 3R | 32079331 | 3R | 19155863..19156406 | 640..97 | 2720 | 100 | Minus |
| 3R | 32079331 | 3R | 19156466..19156547 | 100..19 | 410 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 05:47:59 has no hits.
BO31776.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-25 14:07:15 Download gff for
BO31776.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11779-RB | 357..1640 | 17..1302 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:40:47 Download gff for
BO31776.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11779-RB | 357..1640 | 17..1302 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 06:18:35 Download gff for
BO31776.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11779-RB | 357..1640 | 17..1302 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 06:18:35 Download gff for
BO31776.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 19155132..19155797 | 639..1302 | 99 | <- | Minus |
| 3R | 19155865..19156402 | 101..638 | 100 | <- | Minus |
| 3R | 19156466..19156548 | 17..100 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:40:47 Download gff for
BO31776.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 14980854..14981519 | 639..1302 | 99 | <- | Minus |
| arm_3R | 14981587..14982124 | 101..638 | 100 | <- | Minus |
| arm_3R | 14982188..14982270 | 17..100 | 98 | | Minus |
BO31776.pep Sequence
Translation from 16 to 1318
> BO31776.pep
MYRIAALVRDRACLFTCQQASQNLQQQQPRFYSAPGRRAGFFSQFFDNMK
AEMDKNKEIKDNIRKFREEAQKLEESDALKSARQKFNIVESEAQKSSSML
KEQLGAIKERVGDVLEDASKSHLAKKVTEELSKKARGVSDTISDTSGKLG
QTSAFQAISNTTTTIKKEMDSASIENRVYRAPAKLRKRVQLVMSDSDRVV
EPNTEATGMELHKDSKFYESWENFKNNNTYVNKVLDWKVKYDESENPVIR
ASRLLTDKVSDVMGGLFSKTELSETMTELVKIDPSFDQKDFLRDCETDII
PNILESIVRGDLEILKDWCFESTFNIIANPIKEAKKAGVYLDSKILDIEN
IELAMGKVMEQGPVLIITFQAQQIMCVRDQKSQVVEGDPEKVMRVHYVWV
LCRDRNELNPKAAWRLMELSANSSEQFVASFLDH
BO31776.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:21:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11779-PE | 428 | CG11779-PE | 1..428 | 1..428 | 2171 | 100 | Plus |
| CG11779-PB | 428 | CG11779-PB | 1..428 | 1..428 | 2171 | 100 | Plus |
| CG11779-PA | 459 | CG11779-PA | 32..459 | 1..428 | 2167 | 99.8 | Plus |
