BO31780.complete Sequence
3820 bp assembled on 2012-05-15
GenBank Submission: KX795815
> BO31780.complete
GAAGTTATCAGTCGACATGTTTTGGCATTTACTATGCGTTCCAAACGACG
AAAATGCATCCGCGCCCGACGATGGAAATCAATCATGCCAGCCTTCTTCC
AAACAAGATCAGTATCTAAGTCCTAACCGCAATTGCCAGAAAAACCTGTT
GAGGCTTTACCCACCACCCCCATCTAAACCACCACCGCTCGTTGGTGCCA
TCCTGCAAACCCGTCTTCTGCATCAGATAAGCCCGTCCGCAATTGCAGAT
GCGGATGCAGACTTGAATGCAGTAGGGGAGCTTCTATACCCAAATGTCCT
GCAGCGGTCAGCAACTTTGCCAGCGAAACACAACCGCTTAGGGGTTCGAA
GCCGCGTGACCTTTAAGGTCCCTTCGTCTAACCTCCCTGCTCAGGATTCA
TATTCTCATCAACCCCGAAATCAGGTTGCAGTCGCTGCAAAGGACGGAAT
ATTGGTAGACGTCAAGGCTAAGGAGTCCGTCAAGATGACTTCTGAGGATT
TGCTGCAGCCAGGTCATGTTGTGAAGGAGCGTTGGAAGGTTGTCCGTAAA
ATTGGTGGAGGCGGCTTTGGAGAGATATACGAGGGTCAAGATCTTATTAC
CCGTGAACAAGTCGCACTTAAAGTAGAGTCCGCCCGGCAGCCTAAGCAGG
TGCTCAAAATGGAAGTGGCAGTTCTTAAGAAATTGCAGGGAAAGGAGCAC
GTATGTCGATTCATCGGATGTGGGCGGAATGATCGATTTAACTATGTGGT
GATGCAGCTCCAAGGAAAGAATTTAGCTGAACTCCGACGCGCTCAGCCGC
GAGGGGCATTTTCGCTTAGTACAACACTTAGGTTAGGGTTACAAATTTTA
AAGGCCATTGAATCCATCCATTCAGTGGGATTTCTTCATCGTGATATTAA
ACCGAGCAATTTTTCTGTGGGTCGTTTGCCTTATAATTGTCGACGCGTCT
ATATGCTTGACTTCGGATTGGCGCGTCAGTACACCACTGGCACAGGGGAA
GTGCGGTGTCCAAGAGCTGCTGCAGGTTTTCGCGGCACGGTTCGTTATGC
TTCTATTAATGCGCACCGAAATAGAGAAATGGGACGCCACGATGATCTGT
GGTCATTGTTTTATATGCTCGTGGAGTTTGTAAATGGGCAACTGCCATGG
CGAAAAATTAAAGACAAGGAACAAGTTGGGTTGACAAAGGAAAAATATGA
CCACAGAATACTGTTAAAGCATTTGCCGTCAGATTTGAAGCAATTTCTGG
AGCACATTCAATCTCTTACATATGGAGACCGCCCAGACTACGCGATGCTT
ATCGGTTTGTTCGAGAGGTGTATGAAAAGACGTGGGGTCAAAGAGTCCGA
TCCTTATGACTGGGAAAAAGTGGATTCCACTGCAATTGGAAACATAAGTG
CAACAGGCAATCCATCAATTCCTATAAAAAGCGATTATATGCACGGAAAT
ATTACACAAATGACAGTGGCAGCATCTAACGCAAGTGGCACCGAATACAT
ACGAAAGCGGGCCGAAATCGAAACCGCTCATATAACGGCGACCGATCCCC
TTAATATAAAAGAAAAAGTTGATAAAAACTGCAATGCAACTTCACTAGCA
CAGCCAGCAAAAGGATCTGGTGAACCCATGGTACAACATGGTAATGCTGC
AAATAATCAAAATATCACATCAAAAGGACTGCAACAGCAATCTACGTTAA
CAAACTCCCAAGTAGCCATAGCAAATATCCAAAGTGCACCATCAATGATT
GAAAGAGAGGATGTACAGTATACGAAGCTGGAAGAGGGGGCACCGACAAA
ATTTATAACAATGAAACCAAATGGAGAGTGTGATAATGTTGATATAGCTG
CAAAGTGTATTTTTGAGCAAAAGCACGTTGAAGCAAATGATGACATAGTT
GGCAGAGCTTCCTTAAGCGGGGTCGAACAGCATTACAAGTCCCAAATAAA
AAAACATAATTCACCAGAAATTGCTAATAAGCAGATACAGAGGACTGGGA
CAGTAACAAACGATAAAACCTCAGAAGTCAATCGGTCAACGGAAGAACAA
AAATCTACGTTTGGGCGACTACGTGTGCTAACAGCCCCACCAATGAGTGT
ACATGATCTACCATCGGGTGGAGGCCATAGCCATCAAGTGTCAGATTTAT
CTGGAAAACAAGATCCATATGCTGCCACTAGCAATGCTGCCCCAATAGGT
ATAAACAGCTCGTCCACAAAATTTGGCAGCCAGCATGGTCAAATTTTTGG
CCTCGCAGCCATGCCGCCGATTAATCGCCGTTCTGCAACCTCCACAAATT
TGCGGCCATCTTCCTCGGCAAGTCAAAGGATTAATAGTGGGTCGACAATT
GGAGGAGCAGTTGGTAACGGAAGCAACACTGCCAGAAGCAGCGTTGCAGG
TGACCATTCGGTCACCCAATTCGCTTTAATAGACGACGAGAACGTTTCAG
CTTTGCAGCAAGTAACGAAAGGAGGAGCTCTCACGTTGGCATCGCAATGG
AAGAGTCAGTTTGATGATTCCGAGGATACTACGGATAACGAATGGAATAG
AGAACACCAGTTGCAACCCAATTTGGAGCAATTGATTAAACTGGATATTT
CATTGCCCTTAAATGAAGCTAAACCATTTCCGCAACATGGCGTCGCTGGT
ACAGGCAAATTAATTAATCCTCCAGGCGAAGCAAAGGGGAGACCGAAAAG
GTACACACTAAACATAACTGGAATTGAGAATTATGAAGCTTTGAGAATCT
CCATACCAAACTGCTGGTCCGAGCCTGCAATGGGTAATGTATTACGAAAA
GGTTTGGAGCCTCCGGCTGTGCAACAAGCCGCATTTGATGACACAGTATA
TCGTATGGATATTGCGAGGAATGTCTGCGTGCGAGAAACATATTCGGAAA
TCACTCATTTGGCTAGGCCTAGCACATCGTCCGTTTTAAGGAATAGGCTA
CCATCTCCTTTTAAAAAGGATTCAGCACTTCAACTTAATAGTACTAATGA
CAGTCTAGATAAATCGAGACATCGGAACAGCCTTCCCAATGTTTCAGTTA
ACGATATTTTTGACGACCTACAAATGAAACTAAATTTAGATTTAGGATCA
GCGATCCAGGAAAACAACTGTTGCATTAGTGGGCGACTAGAAATTCGTGT
TATTCCCAAAGATACCTCTCATCCTGATGATTCTGTTTACTATGATGCAA
TGGGAGCTGTTAAAAATACTCCAACCGCTAATGAAGGTCACGACCATTCT
GATCAAGCCGTCAATAACTGTGATGAAATGGAGGCGACATCTGCCGTGAT
AGCTTTCCCAAATAAATCAATCAGTAAAATTATGTCACCACCCGGCAGGG
ACGCCACCGAAGAGCGAACCGGAGCTAGTTTATGTAGCCTTTATTCTGCA
GGGGTCAATAAACTAAAGTTAAATGGAAACACTGCCCCCAGAACTCAATT
TAAAAAAGGCAGCACTGACGGTTTCGGCGAGAATGAGTCAGAATTTGATT
TTCCGCTATTGAATCCAAGCAAAATTCCAGTACGCCAATCAAAATGCGCA
TCTTGGGCAGGTGCTGATTTTATAAGTGCATCTAAGCCACTTGAGTCCGC
AGAAGTTCCACAGGAAATCCCTTACCATCCACAGTCTGATACGACATATT
CTGTAATAGATTCTATACCTGTTCGGAAAACCACTTACTCCATTGCCTTA
GAATGTCCTCCTAATATATCAGATCTTACACCAGGTTTGTCATACTTTTA
TTGTAATATTGTAGTCCCATTACGGTTGTTTTCAATACTTTTAACAGAAT
CGGCAAGCTTTCTAGACCAT
BO31780.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:17:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Asator-RE | 3789 | CG11533-PE | 1..3786 | 17..3802 | 18930 | 100 | Plus |
| Asator-RJ | 3786 | CG11533-PJ | 24..3783 | 43..3802 | 18800 | 100 | Plus |
| Asator-RD | 4050 | CG11533-PD | 1..3719 | 17..3735 | 18595 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:17:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Asator-RE | 4104 | CG11533-RE | 135..3920 | 17..3802 | 18930 | 100 | Plus |
| Asator-RK | 4247 | CG11533-RK | 304..4063 | 43..3802 | 18800 | 100 | Plus |
| Asator-RJ | 4768 | CG11533-RJ | 825..4584 | 43..3802 | 18800 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:17:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 4 | 1348131 | 4 | 477292..478088 | 2560..1764 | 3985 | 100 | Minus |
| 4 | 1348131 | 4 | 473079..473721 | 3802..3160 | 3215 | 100 | Minus |
| 4 | 1348131 | 4 | 481207..481704 | 540..43 | 2490 | 100 | Minus |
| 4 | 1348131 | 4 | 480302..480692 | 1294..904 | 1955 | 100 | Minus |
| 4 | 1348131 | 4 | 480776..481143 | 904..537 | 1840 | 100 | Minus |
| 4 | 1348131 | 4 | 474453..474768 | 3161..2846 | 1580 | 100 | Minus |
| 4 | 1348131 | 4 | 480035..480239 | 1498..1294 | 1025 | 100 | Minus |
| 4 | 1348131 | 4 | 478538..478742 | 1768..1564 | 1010 | 99.5 | Minus |
| 4 | 1348131 | 4 | 474957..475106 | 2848..2699 | 750 | 100 | Minus |
| 4 | 1348131 | 4 | 476961..477105 | 2702..2558 | 725 | 100 | Minus |
| 4 | 1348131 | 4 | 478798..478868 | 1569..1499 | 355 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 11:17:54 has no hits.
BO31780.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-15 10:36:19 Download gff for
BO31780.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Asator-RE | 108..3886 | 24..3804 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:19:14 Download gff for
BO31780.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Asator-RE | 142..3920 | 24..3804 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:39:58 Download gff for
BO31780.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Asator-RE | 142..3920 | 24..3804 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:39:58 Download gff for
BO31780.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 4 | 478800..478868 | 1499..1567 | 100 | <- | Minus |
| 4 | 480035..480238 | 1295..1498 | 100 | <- | Minus |
| 4 | 473077..473719 | 3162..3804 | 99 | <- | Minus |
| 4 | 474453..474768 | 2846..3161 | 100 | <- | Minus |
| 4 | 474960..475104 | 2701..2845 | 100 | <- | Minus |
| 4 | 476963..477102 | 2561..2700 | 100 | <- | Minus |
| 4 | 477292..478083 | 1769..2560 | 100 | <- | Minus |
| 4 | 478538..478738 | 1568..1768 | 100 | <- | Minus |
| 4 | 480302..480691 | 905..1294 | 100 | <- | Minus |
| 4 | 480776..481141 | 539..904 | 100 | <- | Minus |
| 4 | 481209..481704 | 43..538 | 100 | <- | Minus |
| 4 | 481811..481829 | 24..42 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:19:14 Download gff for
BO31780.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_4 | 499426..499494 | 1499..1567 | 100 | <- | Minus |
| arm_4 | 500661..500864 | 1295..1498 | 100 | <- | Minus |
| arm_4 | 493703..494345 | 3162..3804 | 99 | <- | Minus |
| arm_4 | 495079..495394 | 2846..3161 | 100 | <- | Minus |
| arm_4 | 495586..495730 | 2701..2845 | 100 | <- | Minus |
| arm_4 | 497589..497728 | 2561..2700 | 100 | <- | Minus |
| arm_4 | 497918..498709 | 1769..2560 | 100 | <- | Minus |
| arm_4 | 499164..499364 | 1568..1768 | 100 | <- | Minus |
| arm_4 | 500928..501317 | 905..1294 | 100 | <- | Minus |
| arm_4 | 501402..501767 | 539..904 | 100 | <- | Minus |
| arm_4 | 501835..502330 | 43..538 | 100 | <- | Minus |
| arm_4 | 502437..502455 | 24..42 | 100 | | Minus |
BO31780.pep Sequence
Translation from 16 to 3820
> BO31780.pep
MFWHLLCVPNDENASAPDDGNQSCQPSSKQDQYLSPNRNCQKNLLRLYPP
PPSKPPPLVGAILQTRLLHQISPSAIADADADLNAVGELLYPNVLQRSAT
LPAKHNRLGVRSRVTFKVPSSNLPAQDSYSHQPRNQVAVAAKDGILVDVK
AKESVKMTSEDLLQPGHVVKERWKVVRKIGGGGFGEIYEGQDLITREQVA
LKVESARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQG
KNLAELRRAQPRGAFSLSTTLRLGLQILKAIESIHSVGFLHRDIKPSNFS
VGRLPYNCRRVYMLDFGLARQYTTGTGEVRCPRAAAGFRGTVRYASINAH
RNREMGRHDDLWSLFYMLVEFVNGQLPWRKIKDKEQVGLTKEKYDHRILL
KHLPSDLKQFLEHIQSLTYGDRPDYAMLIGLFERCMKRRGVKESDPYDWE
KVDSTAIGNISATGNPSIPIKSDYMHGNITQMTVAASNASGTEYIRKRAE
IETAHITATDPLNIKEKVDKNCNATSLAQPAKGSGEPMVQHGNAANNQNI
TSKGLQQQSTLTNSQVAIANIQSAPSMIEREDVQYTKLEEGAPTKFITMK
PNGECDNVDIAAKCIFEQKHVEANDDIVGRASLSGVEQHYKSQIKKHNSP
EIANKQIQRTGTVTNDKTSEVNRSTEEQKSTFGRLRVLTAPPMSVHDLPS
GGGHSHQVSDLSGKQDPYAATSNAAPIGINSSSTKFGSQHGQIFGLAAMP
PINRRSATSTNLRPSSSASQRINSGSTIGGAVGNGSNTARSSVAGDHSVT
QFALIDDENVSALQQVTKGGALTLASQWKSQFDDSEDTTDNEWNREHQLQ
PNLEQLIKLDISLPLNEAKPFPQHGVAGTGKLINPPGEAKGRPKRYTLNI
TGIENYEALRISIPNCWSEPAMGNVLRKGLEPPAVQQAAFDDTVYRMDIA
RNVCVRETYSEITHLARPSTSSVLRNRLPSPFKKDSALQLNSTNDSLDKS
RHRNSLPNVSVNDIFDDLQMKLNLDLGSAIQENNCCISGRLEIRVIPKDT
SHPDDSVYYDAMGAVKNTPTANEGHDHSDQAVNNCDEMEATSAVIAFPNK
SISKIMSPPGRDATEERTGASLCSLYSAGVNKLKLNGNTAPRTQFKKGST
DGFGENESEFDFPLLNPSKIPVRQSKCASWAGADFISASKPLESAEVPQE
IPYHPQSDTTYSVIDSIPVRKTTYSIALECPPNISDLTPGLSYFYCNIVV
PLRLFSILLTESASFLDH
BO31780.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:32:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Asator-PE | 1262 | CG11533-PE | 1..1262 | 1..1262 | 6563 | 100 | Plus |
| Asator-PJ | 1261 | CG11533-PJ | 9..1261 | 10..1262 | 6505 | 100 | Plus |
| Asator-PD | 1349 | CG11533-PD | 1..1241 | 1..1241 | 6456 | 100 | Plus |
| Asator-PI | 1348 | CG11533-PI | 9..1240 | 10..1241 | 6398 | 100 | Plus |
| Asator-PK | 1106 | CG11533-PK | 1..1106 | 157..1262 | 5747 | 100 | Plus |
