Clone BO31783 Report

Search the DGRC for BO31783

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:317
Well:83
Vector:pDNR-Dual
Associated Gene/TranscriptHmu-RA
Protein status:BO31783.pep: Imported from assembly
Sequenced Size:1771

Clone Sequence Records

BO31783.complete Sequence

1771 bp assembled on 2012-05-15

GenBank Submission: KX796339

> BO31783.complete
GAAGTTATCAGTCGACATGGGCCTGCTATATGCGCTGCGCGTGAGGATCA
TGAACTTCATGATTTTCTTCCTCCTCATCATCCTAATGCCCGGTCTGCCG
CCGCGCACCACCTTCCCCTTCAAGGACTATATTGTGACCCCGCCCAAAGA
CCTGAAGGGTGCGCTGGAATCGAACTTTCACCTGGAGGGAGCGGAGCGAC
TGCTGGAGGGGCGGGTCTACGGCCCGGAGTGCCTGATAGCCCGCAACAAC
GAGATCTACACCGGCATCCACGGCGGTGAGGTCATCAAGCTAACGTCCAA
CCATGTCACGCATGTCACCAAGATCGGCCAGCCCTGCGAGGACATCTACG
AGGAGTCCCGGTGCGGCCGTCCGCTGGGACTGGCCTTTGATACGCAGGGC
AACAACCTCATCATCGCCGACGCCTACTACGGCCTGTGGCAGGTGGACCT
GGGCACCAATAAGAAGACTCTGCTGGTCTCGCCCGCCCAGGAGCTTGCCG
GCAAGTCCATCAACCGCCCTGCCAAGATTTTCAACGGCGTGACCGTGAGC
AAAGAGGGCGACGTCTACTGGACGGACTCCTCGTCGGACTTCACCATCGA
AGACCTCGTCTTTGCCAGCTTTGCTAACCCCTCCGGCCGTCTCTTCAAAT
ACAATCGCTCGAAGAATGTTAGCGAGGTGCTGCTGGACGAACTGGCTTTC
GCCAATGGATTGGCCCTCAGTCCCAACGAGGACTTCATCGTGGTAGCCGA
AACCGGAGCGATGCGTCTGACAAAGTATCACCTGAAGGGAGCGAAGGCCG
GTCAGAGCGAGGTGTTCGTCGACGGACTGCCCGGTTTGCCCGATAACCTG
ACACCCGACGCCGAGGGCATCTGGGTGCCATTGGTCCAGAGCGCGGATAG
CGAGCATCCCAACGGCTTCACCCTGTTCACTCGCTTCCCCAGCGTGCGCC
TGTTCCTGGCCCGCATGCTGGCTTTGTTCGAGCTGCCCTTCCGCTACTTG
AACAGCGTATATCCGAACAAGTTCTCGCAGCGATTCGTTCACTTCGTGGG
ACACATGGAGAGCATCACTGTGCTGGCGCCCAAGCGAACGACTGTCGTGC
GTGTGGACTGGAACGGCAACATTGTGGGCTCGCTGCATGGCTTCGACAAG
TCGGCCGCCACGGTATCACACGTCCTGGAGTTCCAGGACTTCTTGTTCTT
GGGCTCCCCCACCAATCAGTACCTGGCGCGTGTCAAGTCGCCAAAGGCCA
AGCAGCCCACGCTGAAGGTGCGCAATGTTCGCGTCGAGGGCGAGGGCTTG
GAGGCGTCCATTGGTGTGCCACCCAGCAAAGCCACTCCTAAACCCAAGGC
GGCTCCTAGCACCACCACTCCGAAACCCACTACCACAACGACAACTACCA
CGCCGAAACCCACTACCAAGACGACAACTACTACAACCACGCCAAAGCCC
ACTACCACAACGACAACCAAGAAGCCAACGACCACTACCACCACTACGAC
AACCACGCCGAAGCCAACAACTACTAAGCCGCCGACAGCTAAGCCATCTA
CGACTACAACAACCACCACTACTCCTAAGCCAACTACTACTACTACTCCT
ACTACTCCTACTCCAGAGCCTTCTAAACCGAAGGTCAAGCGCACAGTGCC
TGAGAAACCCGCGCCCGTTGAGGAGGATATCCCCTCGGACACACAGCCAC
CCAAGAAGGAGAAGCTCAAGGTCATCAACAAGCAAGGCGTCAATGTGGAG
CTTGCAAGCTTTCTAGACCAT

BO31783.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:17:43
Subject Length Description Subject Range Query Range Score Percent Strand
Hmu-RA 1740 CG3373-PA 1..1737 17..1753 8685 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:17:44
Subject Length Description Subject Range Query Range Score Percent Strand
Hmu-RA 2360 CG3373-RA 161..1898 16..1753 8690 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:17:41
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 27290016..27291130 639..1753 5575 100 Plus
3R 32079331 3R 27289379..27289680 338..639 1510 100 Plus
3R 32079331 3R 27289115..27289320 133..338 1030 100 Plus
3R 32079331 3R 27288929..27289045 16..132 585 100 Plus
Blast to na_te.dros performed on 2014-11-28 11:17:42 has no hits.

BO31783.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-15 10:36:18 Download gff for BO31783.complete
Subject Subject Range Query Range Percent Splice Strand
Hmu-RA 160..1896 17..1755 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:19:10 Download gff for BO31783.complete
Subject Subject Range Query Range Percent Splice Strand
Hmu-RA 162..1898 17..1755 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:39:54 Download gff for BO31783.complete
Subject Subject Range Query Range Percent Splice Strand
Hmu-RA 162..1898 17..1755 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:39:54 Download gff for BO31783.complete
Subject Subject Range Query Range Percent Splice Strand
3R 27288930..27289045 17..132 100 -> Plus
3R 27289380..27289680 339..639 100 -> Plus
3R 27289115..27289320 133..338 100 -> Plus
3R 27290017..27291130 640..1755 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:19:10 Download gff for BO31783.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 23115102..23115402 339..639 100 -> Plus
arm_3R 23114652..23114767 17..132 100 -> Plus
arm_3R 23114837..23115042 133..338 100 -> Plus
arm_3R 23115739..23116852 640..1755 99   Plus

BO31783.pep Sequence

Translation from 16 to 1771

> BO31783.pep
MGLLYALRVRIMNFMIFFLLIILMPGLPPRTTFPFKDYIVTPPKDLKGAL
ESNFHLEGAERLLEGRVYGPECLIARNNEIYTGIHGGEVIKLTSNHVTHV
TKIGQPCEDIYEESRCGRPLGLAFDTQGNNLIIADAYYGLWQVDLGTNKK
TLLVSPAQELAGKSINRPAKIFNGVTVSKEGDVYWTDSSSDFTIEDLVFA
SFANPSGRLFKYNRSKNVSEVLLDELAFANGLALSPNEDFIVVAETGAMR
LTKYHLKGAKAGQSEVFVDGLPGLPDNLTPDAEGIWVPLVQSADSEHPNG
FTLFTRFPSVRLFLARMLALFELPFRYLNSVYPNKFSQRFVHFVGHMESI
TVLAPKRTTVVRVDWNGNIVGSLHGFDKSAATVSHVLEFQDFLFLGSPTN
QYLARVKSPKAKQPTLKVRNVRVEGEGLEASIGVPPSKATPKPKAAPSTT
TPKPTTTTTTTTPKPTTKTTTTTTTPKPTTTTTTKKPTTTTTTTTTTPKP
TTTKPPTAKPSTTTTTTTTPKPTTTTTPTTPTPEPSKPKVKRTVPEKPAP
VEEDIPSDTQPPKKEKLKVINKQGVNVELASFLDH

BO31783.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:32:05
Subject Length Description Subject Range Query Range Score Percent Strand
Hmu-PA 579 CG3373-PA 1..579 1..579 3024 100 Plus
Ssl2-PB 414 CG11833-PB 1..412 1..417 1244 56.9 Plus
Sgs1-PA 1286 CG3047-PA 1040..1190 436..561 296 48.3 Plus
CG34220-PA 726 CG34220-PA 258..412 436..561 291 45.8 Plus
CG34220-PA 726 CG34220-PA 268..403 435..565 286 48.5 Plus
CG34220-PA 726 CG34220-PA 107..244 440..561 285 49.3 Plus
Sgs1-PA 1286 CG3047-PA 352..496 436..561 280 47.6 Plus
Sgs1-PA 1286 CG3047-PA 992..1131 436..561 276 49.6 Plus
CG34220-PA 726 CG34220-PA 35..140 426..532 276 58.9 Plus
CG34220-PA 726 CG34220-PA 117..231 448..562 276 50.4 Plus
Sgs1-PA 1286 CG3047-PA 224..368 436..561 274 46.9 Plus
Sgs3-PA 307 CG11720-PA 95..223 440..561 271 51.5 Plus
Sgs1-PA 1286 CG3047-PA 448..592 436..561 269 48.3 Plus
Sgs1-PA 1286 CG3047-PA 944..1099 436..561 268 44.6 Plus
CG34220-PA 726 CG34220-PA 104..220 448..561 268 53.3 Plus
Sgs1-PA 1286 CG3047-PA 320..448 436..561 267 47.4 Plus
Sgs1-PA 1286 CG3047-PA 256..400 436..561 266 48.3 Plus
Sgs1-PA 1286 CG3047-PA 362..539 397..561 266 42.2 Plus
CG34220-PA 726 CG34220-PA 246..380 435..561 266 47.1 Plus
Sgs1-PA 1286 CG3047-PA 336..480 436..561 264 46.9 Plus
Sgs1-PA 1286 CG3047-PA 416..560 436..561 263 46.9 Plus
CG34220-PA 726 CG34220-PA 74..201 435..562 263 48.4 Plus
Sgs1-PA 1286 CG3047-PA 464..608 436..561 262 46.3 Plus
Sgs1-PA 1286 CG3047-PA 912..1051 436..561 261 48.9 Plus
Sgs1-PA 1286 CG3047-PA 272..416 436..561 260 46.9 Plus
CG34220-PA 726 CG34220-PA 496..622 435..553 260 47.2 Plus
Sgs1-PA 1286 CG3047-PA 784..928 436..561 259 46.9 Plus
Sgs1-PA 1286 CG3047-PA 656..800 436..561 256 46.9 Plus
Sgs1-PA 1286 CG3047-PA 720..864 436..561 256 46.9 Plus
Sgs1-PA 1286 CG3047-PA 592..736 436..561 256 46.9 Plus
Sgs1-PA 1286 CG3047-PA 288..432 436..561 255 44.8 Plus
Sgs1-PA 1286 CG3047-PA 976..1120 436..561 255 44.9 Plus
Sgs1-PA 1286 CG3047-PA 496..640 436..561 254 45.6 Plus
CG34220-PA 726 CG34220-PA 139..260 448..561 254 47.5 Plus
Sgs1-PA 1286 CG3047-PA 832..976 436..561 253 46.2 Plus
Sgs1-PA 1286 CG3047-PA 1008..1152 436..561 251 44.2 Plus
Sgs1-PA 1286 CG3047-PA 480..624 436..561 248 44.9 Plus
Sgs1-PA 1286 CG3047-PA 928..1077 436..566 248 43.4 Plus
Sgs1-PA 1286 CG3047-PA 864..1008 436..561 246 45.5 Plus
Sgs1-PA 1286 CG3047-PA 528..672 436..561 243 44.8 Plus
Sgs1-PA 1286 CG3047-PA 560..704 436..561 241 44.8 Plus
Sgs1-PA 1286 CG3047-PA 512..656 436..561 240 44.1 Plus
Sgs1-PA 1286 CG3047-PA 544..688 436..561 240 44.8 Plus
Sgs1-PA 1286 CG3047-PA 960..1104 436..561 240 41.5 Plus
CG34220-PA 726 CG34220-PA 489..608 436..562 239 45.7 Plus
Sgs1-PA 1286 CG3047-PA 608..752 436..561 237 44.1 Plus
Sgs1-PA 1286 CG3047-PA 624..768 436..561 237 44.1 Plus
Sgs1-PA 1286 CG3047-PA 640..784 436..561 237 44.1 Plus
Sgs1-PA 1286 CG3047-PA 672..816 436..561 237 44.1 Plus
Sgs1-PA 1286 CG3047-PA 688..832 436..561 237 44.1 Plus
Sgs1-PA 1286 CG3047-PA 704..848 436..561 237 44.1 Plus
Sgs1-PA 1286 CG3047-PA 736..880 436..561 237 44.1 Plus
Sgs1-PA 1286 CG3047-PA 752..896 436..561 237 44.1 Plus
Sgs1-PA 1286 CG3047-PA 768..912 436..561 237 44.1 Plus
Sgs1-PA 1286 CG3047-PA 576..720 436..561 236 44.1 Plus
CG34220-PA 726 CG34220-PA 303..426 448..562 236 48 Plus
CG34220-PA 726 CG34220-PA 398..524 435..562 236 44 Plus
CG34220-PA 726 CG34220-PA 410..537 436..559 236 43 Plus
Sgs1-PA 1286 CG3047-PA 816..960 436..561 235 43.4 Plus
Sgs1-PA 1286 CG3047-PA 880..1019 436..561 232 44.7 Plus
CG34220-PA 726 CG34220-PA 32..130 435..532 230 56.4 Plus
Sgs1-PA 1286 CG3047-PA 183..336 434..561 229 43.5 Plus
CG34220-PA 726 CG34220-PA 518..630 435..532 227 52.2 Plus
CG34220-PA 726 CG34220-PA 239..332 436..532 225 51.5 Plus
CG34220-PA 726 CG34220-PA 391..510 436..561 222 42.9 Plus
CG34220-PA 726 CG34220-PA 28..118 436..532 200 52 Plus
CG34220-PA 726 CG34220-PA 145..274 435..562 199 37.6 Plus
Sgs1-PA 1286 CG3047-PA 172..288 429..561 188 39.8 Plus
CG34220-PA 726 CG34220-PA 313..494 440..561 182 35 Plus
Sgs1-PA 1286 CG3047-PA 1104..1246 436..561 175 37.1 Plus
CG34220-PA 726 CG34220-PA 204..308 435..532 165 37.7 Plus