BO31783.complete Sequence
1771 bp assembled on 2012-05-15
GenBank Submission: KX796339
> BO31783.complete
GAAGTTATCAGTCGACATGGGCCTGCTATATGCGCTGCGCGTGAGGATCA
TGAACTTCATGATTTTCTTCCTCCTCATCATCCTAATGCCCGGTCTGCCG
CCGCGCACCACCTTCCCCTTCAAGGACTATATTGTGACCCCGCCCAAAGA
CCTGAAGGGTGCGCTGGAATCGAACTTTCACCTGGAGGGAGCGGAGCGAC
TGCTGGAGGGGCGGGTCTACGGCCCGGAGTGCCTGATAGCCCGCAACAAC
GAGATCTACACCGGCATCCACGGCGGTGAGGTCATCAAGCTAACGTCCAA
CCATGTCACGCATGTCACCAAGATCGGCCAGCCCTGCGAGGACATCTACG
AGGAGTCCCGGTGCGGCCGTCCGCTGGGACTGGCCTTTGATACGCAGGGC
AACAACCTCATCATCGCCGACGCCTACTACGGCCTGTGGCAGGTGGACCT
GGGCACCAATAAGAAGACTCTGCTGGTCTCGCCCGCCCAGGAGCTTGCCG
GCAAGTCCATCAACCGCCCTGCCAAGATTTTCAACGGCGTGACCGTGAGC
AAAGAGGGCGACGTCTACTGGACGGACTCCTCGTCGGACTTCACCATCGA
AGACCTCGTCTTTGCCAGCTTTGCTAACCCCTCCGGCCGTCTCTTCAAAT
ACAATCGCTCGAAGAATGTTAGCGAGGTGCTGCTGGACGAACTGGCTTTC
GCCAATGGATTGGCCCTCAGTCCCAACGAGGACTTCATCGTGGTAGCCGA
AACCGGAGCGATGCGTCTGACAAAGTATCACCTGAAGGGAGCGAAGGCCG
GTCAGAGCGAGGTGTTCGTCGACGGACTGCCCGGTTTGCCCGATAACCTG
ACACCCGACGCCGAGGGCATCTGGGTGCCATTGGTCCAGAGCGCGGATAG
CGAGCATCCCAACGGCTTCACCCTGTTCACTCGCTTCCCCAGCGTGCGCC
TGTTCCTGGCCCGCATGCTGGCTTTGTTCGAGCTGCCCTTCCGCTACTTG
AACAGCGTATATCCGAACAAGTTCTCGCAGCGATTCGTTCACTTCGTGGG
ACACATGGAGAGCATCACTGTGCTGGCGCCCAAGCGAACGACTGTCGTGC
GTGTGGACTGGAACGGCAACATTGTGGGCTCGCTGCATGGCTTCGACAAG
TCGGCCGCCACGGTATCACACGTCCTGGAGTTCCAGGACTTCTTGTTCTT
GGGCTCCCCCACCAATCAGTACCTGGCGCGTGTCAAGTCGCCAAAGGCCA
AGCAGCCCACGCTGAAGGTGCGCAATGTTCGCGTCGAGGGCGAGGGCTTG
GAGGCGTCCATTGGTGTGCCACCCAGCAAAGCCACTCCTAAACCCAAGGC
GGCTCCTAGCACCACCACTCCGAAACCCACTACCACAACGACAACTACCA
CGCCGAAACCCACTACCAAGACGACAACTACTACAACCACGCCAAAGCCC
ACTACCACAACGACAACCAAGAAGCCAACGACCACTACCACCACTACGAC
AACCACGCCGAAGCCAACAACTACTAAGCCGCCGACAGCTAAGCCATCTA
CGACTACAACAACCACCACTACTCCTAAGCCAACTACTACTACTACTCCT
ACTACTCCTACTCCAGAGCCTTCTAAACCGAAGGTCAAGCGCACAGTGCC
TGAGAAACCCGCGCCCGTTGAGGAGGATATCCCCTCGGACACACAGCCAC
CCAAGAAGGAGAAGCTCAAGGTCATCAACAAGCAAGGCGTCAATGTGGAG
CTTGCAAGCTTTCTAGACCAT
BO31783.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:17:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Hmu-RA | 1740 | CG3373-PA | 1..1737 | 17..1753 | 8685 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:17:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Hmu-RA | 2360 | CG3373-RA | 161..1898 | 16..1753 | 8690 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:17:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 27290016..27291130 | 639..1753 | 5575 | 100 | Plus |
3R | 32079331 | 3R | 27289379..27289680 | 338..639 | 1510 | 100 | Plus |
3R | 32079331 | 3R | 27289115..27289320 | 133..338 | 1030 | 100 | Plus |
3R | 32079331 | 3R | 27288929..27289045 | 16..132 | 585 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 11:17:42 has no hits.
BO31783.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-15 10:36:18 Download gff for
BO31783.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Hmu-RA | 160..1896 | 17..1755 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:19:10 Download gff for
BO31783.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Hmu-RA | 162..1898 | 17..1755 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:39:54 Download gff for
BO31783.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Hmu-RA | 162..1898 | 17..1755 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:39:54 Download gff for
BO31783.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 27288930..27289045 | 17..132 | 100 | -> | Plus |
3R | 27289380..27289680 | 339..639 | 100 | -> | Plus |
3R | 27289115..27289320 | 133..338 | 100 | -> | Plus |
3R | 27290017..27291130 | 640..1755 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:19:10 Download gff for
BO31783.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 23115102..23115402 | 339..639 | 100 | -> | Plus |
arm_3R | 23114652..23114767 | 17..132 | 100 | -> | Plus |
arm_3R | 23114837..23115042 | 133..338 | 100 | -> | Plus |
arm_3R | 23115739..23116852 | 640..1755 | 99 | | Plus |
BO31783.pep Sequence
Translation from 16 to 1771
> BO31783.pep
MGLLYALRVRIMNFMIFFLLIILMPGLPPRTTFPFKDYIVTPPKDLKGAL
ESNFHLEGAERLLEGRVYGPECLIARNNEIYTGIHGGEVIKLTSNHVTHV
TKIGQPCEDIYEESRCGRPLGLAFDTQGNNLIIADAYYGLWQVDLGTNKK
TLLVSPAQELAGKSINRPAKIFNGVTVSKEGDVYWTDSSSDFTIEDLVFA
SFANPSGRLFKYNRSKNVSEVLLDELAFANGLALSPNEDFIVVAETGAMR
LTKYHLKGAKAGQSEVFVDGLPGLPDNLTPDAEGIWVPLVQSADSEHPNG
FTLFTRFPSVRLFLARMLALFELPFRYLNSVYPNKFSQRFVHFVGHMESI
TVLAPKRTTVVRVDWNGNIVGSLHGFDKSAATVSHVLEFQDFLFLGSPTN
QYLARVKSPKAKQPTLKVRNVRVEGEGLEASIGVPPSKATPKPKAAPSTT
TPKPTTTTTTTTPKPTTKTTTTTTTPKPTTTTTTKKPTTTTTTTTTTPKP
TTTKPPTAKPSTTTTTTTTPKPTTTTTPTTPTPEPSKPKVKRTVPEKPAP
VEEDIPSDTQPPKKEKLKVINKQGVNVELASFLDH
BO31783.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:32:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Hmu-PA | 579 | CG3373-PA | 1..579 | 1..579 | 3024 | 100 | Plus |
Ssl2-PB | 414 | CG11833-PB | 1..412 | 1..417 | 1244 | 56.9 | Plus |
Sgs1-PA | 1286 | CG3047-PA | 1040..1190 | 436..561 | 296 | 48.3 | Plus |
CG34220-PA | 726 | CG34220-PA | 258..412 | 436..561 | 291 | 45.8 | Plus |
CG34220-PA | 726 | CG34220-PA | 268..403 | 435..565 | 286 | 48.5 | Plus |
CG34220-PA | 726 | CG34220-PA | 107..244 | 440..561 | 285 | 49.3 | Plus |
Sgs1-PA | 1286 | CG3047-PA | 352..496 | 436..561 | 280 | 47.6 | Plus |
Sgs1-PA | 1286 | CG3047-PA | 992..1131 | 436..561 | 276 | 49.6 | Plus |
CG34220-PA | 726 | CG34220-PA | 35..140 | 426..532 | 276 | 58.9 | Plus |
CG34220-PA | 726 | CG34220-PA | 117..231 | 448..562 | 276 | 50.4 | Plus |
Sgs1-PA | 1286 | CG3047-PA | 224..368 | 436..561 | 274 | 46.9 | Plus |
Sgs3-PA | 307 | CG11720-PA | 95..223 | 440..561 | 271 | 51.5 | Plus |
Sgs1-PA | 1286 | CG3047-PA | 448..592 | 436..561 | 269 | 48.3 | Plus |
Sgs1-PA | 1286 | CG3047-PA | 944..1099 | 436..561 | 268 | 44.6 | Plus |
CG34220-PA | 726 | CG34220-PA | 104..220 | 448..561 | 268 | 53.3 | Plus |
Sgs1-PA | 1286 | CG3047-PA | 320..448 | 436..561 | 267 | 47.4 | Plus |
Sgs1-PA | 1286 | CG3047-PA | 256..400 | 436..561 | 266 | 48.3 | Plus |
Sgs1-PA | 1286 | CG3047-PA | 362..539 | 397..561 | 266 | 42.2 | Plus |
CG34220-PA | 726 | CG34220-PA | 246..380 | 435..561 | 266 | 47.1 | Plus |
Sgs1-PA | 1286 | CG3047-PA | 336..480 | 436..561 | 264 | 46.9 | Plus |
Sgs1-PA | 1286 | CG3047-PA | 416..560 | 436..561 | 263 | 46.9 | Plus |
CG34220-PA | 726 | CG34220-PA | 74..201 | 435..562 | 263 | 48.4 | Plus |
Sgs1-PA | 1286 | CG3047-PA | 464..608 | 436..561 | 262 | 46.3 | Plus |
Sgs1-PA | 1286 | CG3047-PA | 912..1051 | 436..561 | 261 | 48.9 | Plus |
Sgs1-PA | 1286 | CG3047-PA | 272..416 | 436..561 | 260 | 46.9 | Plus |
CG34220-PA | 726 | CG34220-PA | 496..622 | 435..553 | 260 | 47.2 | Plus |
Sgs1-PA | 1286 | CG3047-PA | 784..928 | 436..561 | 259 | 46.9 | Plus |
Sgs1-PA | 1286 | CG3047-PA | 656..800 | 436..561 | 256 | 46.9 | Plus |
Sgs1-PA | 1286 | CG3047-PA | 720..864 | 436..561 | 256 | 46.9 | Plus |
Sgs1-PA | 1286 | CG3047-PA | 592..736 | 436..561 | 256 | 46.9 | Plus |
Sgs1-PA | 1286 | CG3047-PA | 288..432 | 436..561 | 255 | 44.8 | Plus |
Sgs1-PA | 1286 | CG3047-PA | 976..1120 | 436..561 | 255 | 44.9 | Plus |
Sgs1-PA | 1286 | CG3047-PA | 496..640 | 436..561 | 254 | 45.6 | Plus |
CG34220-PA | 726 | CG34220-PA | 139..260 | 448..561 | 254 | 47.5 | Plus |
Sgs1-PA | 1286 | CG3047-PA | 832..976 | 436..561 | 253 | 46.2 | Plus |
Sgs1-PA | 1286 | CG3047-PA | 1008..1152 | 436..561 | 251 | 44.2 | Plus |
Sgs1-PA | 1286 | CG3047-PA | 480..624 | 436..561 | 248 | 44.9 | Plus |
Sgs1-PA | 1286 | CG3047-PA | 928..1077 | 436..566 | 248 | 43.4 | Plus |
Sgs1-PA | 1286 | CG3047-PA | 864..1008 | 436..561 | 246 | 45.5 | Plus |
Sgs1-PA | 1286 | CG3047-PA | 528..672 | 436..561 | 243 | 44.8 | Plus |
Sgs1-PA | 1286 | CG3047-PA | 560..704 | 436..561 | 241 | 44.8 | Plus |
Sgs1-PA | 1286 | CG3047-PA | 512..656 | 436..561 | 240 | 44.1 | Plus |
Sgs1-PA | 1286 | CG3047-PA | 544..688 | 436..561 | 240 | 44.8 | Plus |
Sgs1-PA | 1286 | CG3047-PA | 960..1104 | 436..561 | 240 | 41.5 | Plus |
CG34220-PA | 726 | CG34220-PA | 489..608 | 436..562 | 239 | 45.7 | Plus |
Sgs1-PA | 1286 | CG3047-PA | 608..752 | 436..561 | 237 | 44.1 | Plus |
Sgs1-PA | 1286 | CG3047-PA | 624..768 | 436..561 | 237 | 44.1 | Plus |
Sgs1-PA | 1286 | CG3047-PA | 640..784 | 436..561 | 237 | 44.1 | Plus |
Sgs1-PA | 1286 | CG3047-PA | 672..816 | 436..561 | 237 | 44.1 | Plus |
Sgs1-PA | 1286 | CG3047-PA | 688..832 | 436..561 | 237 | 44.1 | Plus |
Sgs1-PA | 1286 | CG3047-PA | 704..848 | 436..561 | 237 | 44.1 | Plus |
Sgs1-PA | 1286 | CG3047-PA | 736..880 | 436..561 | 237 | 44.1 | Plus |
Sgs1-PA | 1286 | CG3047-PA | 752..896 | 436..561 | 237 | 44.1 | Plus |
Sgs1-PA | 1286 | CG3047-PA | 768..912 | 436..561 | 237 | 44.1 | Plus |
Sgs1-PA | 1286 | CG3047-PA | 576..720 | 436..561 | 236 | 44.1 | Plus |
CG34220-PA | 726 | CG34220-PA | 303..426 | 448..562 | 236 | 48 | Plus |
CG34220-PA | 726 | CG34220-PA | 398..524 | 435..562 | 236 | 44 | Plus |
CG34220-PA | 726 | CG34220-PA | 410..537 | 436..559 | 236 | 43 | Plus |
Sgs1-PA | 1286 | CG3047-PA | 816..960 | 436..561 | 235 | 43.4 | Plus |
Sgs1-PA | 1286 | CG3047-PA | 880..1019 | 436..561 | 232 | 44.7 | Plus |
CG34220-PA | 726 | CG34220-PA | 32..130 | 435..532 | 230 | 56.4 | Plus |
Sgs1-PA | 1286 | CG3047-PA | 183..336 | 434..561 | 229 | 43.5 | Plus |
CG34220-PA | 726 | CG34220-PA | 518..630 | 435..532 | 227 | 52.2 | Plus |
CG34220-PA | 726 | CG34220-PA | 239..332 | 436..532 | 225 | 51.5 | Plus |
CG34220-PA | 726 | CG34220-PA | 391..510 | 436..561 | 222 | 42.9 | Plus |
CG34220-PA | 726 | CG34220-PA | 28..118 | 436..532 | 200 | 52 | Plus |
CG34220-PA | 726 | CG34220-PA | 145..274 | 435..562 | 199 | 37.6 | Plus |
Sgs1-PA | 1286 | CG3047-PA | 172..288 | 429..561 | 188 | 39.8 | Plus |
CG34220-PA | 726 | CG34220-PA | 313..494 | 440..561 | 182 | 35 | Plus |
Sgs1-PA | 1286 | CG3047-PA | 1104..1246 | 436..561 | 175 | 37.1 | Plus |
CG34220-PA | 726 | CG34220-PA | 204..308 | 435..532 | 165 | 37.7 | Plus |