Clone BO31791 Report

Search the DGRC for BO31791

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:317
Well:91
Vector:pDNR-Dual
Associated Gene/TranscriptGli-RA
Protein status:BO31791.pep: Imported from assembly
Sequenced Size:2902

Clone Sequence Records

BO31791.complete Sequence

2902 bp assembled on 2012-05-15

GenBank Submission: KX798864

> BO31791.complete
GAAGTTATCAGTCGACATGATGCACAAATTGAAATATCGCGATAAATTAA
AATGGCTTTTAGCCCTTCTTGTGCTGATCGGCACTTGTTTTATTCAGACA
AGGGGACAAACAAGAGATCCCAGATTTTATTCTCGGCCAGGCGTTGACTA
CCATTGGCCAAATCCAGGCGATCCGGATTACAGAACCTACACGTTCAACG
ATCGCCGATATGGTCATTATCAGCCAAATGGCTATGGAGCCAACTATCCA
GGCAGAAATCCACCGGGACAATATCCACAGGGAATGCCGAATGAAGATCG
CTTTCGATTTGACCCGAACGATCCGAATGCGAGAACCCAGTTTCCGGGAG
TGCTGGCCGGATGGCGAGAGGATTTGCAGGGCAAGCAGCGGCGGGATTCG
TTGACCCTGGAGCGGGATGTTTTCGTGACCACCAACTATGGCCAGGTGCA
GGGCTTTAAGGTGTACATGTACGATAATCCAGATCCGAAGTCCTTCTATC
GTCCCTACCACTCGACCGTGGATCGTGTGATGGGCGAGTGCTCGGTCTTC
CTGGGCATTCCCTACGCCCTGCCGCCCACCTTCGAGGGCAGGTTCAAGCC
ACCACGCGTCCATCGAGGCTGGCAGCTGCTGCAGGCCGTCGACTTTGGAC
CCGCCTGTCCACAGCCTGTGCGATATACGGGTGCCACGAAAGGAATCATG
GACATGGACGAGGATTGCCTCTACTTGAACGTGTATTCGCCGAAGACTGG
TGCTGGTGTGGCTCAAAAATACCCGGTTATGGTGTACATCCATGGCGGCG
AGTTCATTCGTGGAGCCTCCAACCTATTCCAGGGTCATATTCTGGCCTCG
TTCTACGACGTGGTCGTGGTGACCCTGAATTACCGCCTTGGTGCCCTGGG
ATTCCTATCGACGGGTGATGAGAACTCGCCCGGAAACTACGGAATCCTCG
ATCAAGCGATGGCGCTACGTTGGGTCTATGACAATATTGAGTTCTTCAAC
GGCGATCGGAATTCCATCACTCTATTTGGTCCGGGAGCAGGAGGCGCCTC
CGCTGGACTCCTGATGGTGGCACCACAGACGCGGAACATTGTGCGTCGTG
TGATCGCACAGTCCGGATCGGCTCTAGCGGATTGGGCGCTCATCCAGGAC
AAGTATCGCGCCCAGAACACGAGTCGCGTGCTGGGACAGCTGCTGGGCTG
CTCCATTGAATCGTCGTGGAAGTTGGTCAACTGCCTGCGCACCGGACGCA
GCTTCTATGAGCTGGGAAACGCTGAGTTCTCTCCCCAGGTGGGCAGCTTT
CCATGGGGTCCAGTTCTGGACCACAACTTTACGTTGCCCGGCGACGATTG
GTACGAGGGATGGCGCGAAAAGGATTGGCGTTTCCTCACCCAAACGCCGG
AAACCCTCATCCGTGCCGGTAAATTCAACCGGAATATTCAGTACATGACG
GGCGTGACCACACAGGAAGCGGCCTTTTTTGTGGCCCAAAACGAATCCCT
AAGTCCGTACTATGAACTAGATGGACGTTTCTTCGATCAGAAAATAAGGG
AACACGTTTTCCGCTACAACTATACACTTAATCCGAACGGAGTTTACGAG
GCCATCAAGTACATATACACCTTCTGGCCGGATCCCAATAATAACACCAT
AATCCGGGACCAGTACATAAACATGCTGAGTGATCTCTACTACCGAGCAC
CGGTGGATCAAATGGTCAAGCTAATGCTGGAGCAGAAGGTACCCGTTTAT
ATGTACGTACTGAACACCACTGTGGAGGCACTGAATCTGCCACAGTGGCG
AAAGTATCCACACGACATCGAACGTTATTTCCTCACCGGAGCTCCCTTCA
TGGACACCGAGTTCTTTCCCAAAAAGGAGCATCTGCAGCGCAATATGTGG
ACGGATAACGATCGCAATATGAGTCACTTTTTCATGCAGACCTACACGAA
TTTTGCTAGATATGGCAATCCGACGCCGCAACAGGTGCTAGGCATGCATT
TCCAGCGCGCATACCAGGGCGAGATTCGGTACTTGAACATCAATACCACG
TACAACTCCTCCATTCTACTCAACTATCGGCAGACGGAGTGCGCCTTCTG
GACGCAATACTTGCCCACAGTTATTGGAGTGCTGGTGCCCACTTATCCAC
CCACCACGGAGTATTGGTGGGAGCCCAAGGAGCCACTACAGATCGCCTTT
TGGAGCATGTCGGTGGCCTGTTTCTTCCTCATAGTCCTGGTGGTCATCTG
CTGCATCATGTGGCGCAATGCCAAGCGCCAATCGGATCGCTTCTATGACG
AAGATGTCTTCATTAATGGTGAGGGCTTGGAACCGGAACAGGATACGCGT
GGAGTGGACAATGCCCACATGGTGACCAACCATCATGCCCTGCGCTCCAG
GGATAATATCTACGAGTACCGCGACTCTCCATCCACCAAAACCTTGGCCA
GCAAAGCGCACACGGACACCACCTCGTTGCGCTCACCCAGTTCGCTGGCC
ATGACCCAAAAGTCCAGCAGCCAGGCGTCCCTCAAGTCAGGGATCTCGCT
CAAGGAAACCAATGGCCATTTGGTGAAGCAATCTGAAAGGGCAGCCACGC
CACGATCCCAACAAAATGGGTCCACCGCAAAGGTGGCGTCTCCTCCTGTG
GAGGAGAAGCGTCTACTGCAGCCACTTTCCAGCACGCCCGTGACGCAGTT
GCAGGCGGAGCCGGCCAAAAGAGTTCCCACCGCTGCCAGTGTCTCGGGCA
GCAGTCGGAGCACCACTCCGGTGCCCTCTGCCCGCAGCACCACCACGCAC
ACCACAACAGCCACCCTGAGTTCCCAGCCAGCGGCTCAGCCGAGGAGAAC
CCACCTGGTGGAGGGAGTGCCTCAGACATCCGTAGCAAGCTTTCTAGACC
AT

BO31791.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:18:10
Subject Length Description Subject Range Query Range Score Percent Strand
Gli-RF 2871 CG3903-PF 1..2868 17..2884 14340 100 Plus
Gli-RE 2871 CG3903-PE 1..2868 17..2884 14340 100 Plus
Gli-RD 2871 CG3903-PD 1..2868 17..2884 14340 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:18:12
Subject Length Description Subject Range Query Range Score Percent Strand
Gli-RF 4468 CG3903-RF 569..3437 16..2884 14345 100 Plus
Gli-RE 4007 CG3903-RE 108..2976 16..2884 14345 100 Plus
Gli-RD 3975 CG3903-RD 76..2944 16..2884 14345 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:18:08
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 15758141..15759362 1965..744 6110 100 Minus
2L 23513712 2L 15757099..15757706 2884..2277 3040 100 Minus
2L 23513712 2L 15759417..15759846 745..316 2150 100 Minus
2L 23513712 2L 15757767..15758079 2277..1965 1565 100 Minus
2L 23513712 2L 15760402..15760569 183..16 840 100 Minus
2L 23513712 2L 15760210..15760348 316..178 695 100 Minus
Blast to na_te.dros performed on 2014-11-28 11:18:09 has no hits.

BO31791.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-15 10:36:21 Download gff for BO31791.complete
Subject Subject Range Query Range Percent Splice Strand
Gli-RD 74..2941 17..2886 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:19:18 Download gff for BO31791.complete
Subject Subject Range Query Range Percent Splice Strand
Gli-RD 77..2944 17..2886 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:40:03 Download gff for BO31791.complete
Subject Subject Range Query Range Percent Splice Strand
Gli-RD 77..2944 17..2886 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:40:03 Download gff for BO31791.complete
Subject Subject Range Query Range Percent Splice Strand
2L 15760402..15760568 17..183 100   Minus
2L 15757097..15757705 2278..2886 99 <- Minus
2L 15757767..15758078 1966..2277 100 <- Minus
2L 15758141..15759360 746..1965 100 <- Minus
2L 15759417..15759845 317..745 100 <- Minus
2L 15760210..15760342 184..316 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:19:18 Download gff for BO31791.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 15760402..15760568 17..183 100   Minus
arm_2L 15757097..15757705 2278..2886 99 <- Minus
arm_2L 15757767..15758078 1966..2277 100 <- Minus
arm_2L 15758141..15759360 746..1965 100 <- Minus
arm_2L 15759417..15759845 317..745 100 <- Minus
arm_2L 15760210..15760342 184..316 100 <- Minus

BO31791.pep Sequence

Translation from 16 to 2902

> BO31791.pep
MMHKLKYRDKLKWLLALLVLIGTCFIQTRGQTRDPRFYSRPGVDYHWPNP
GDPDYRTYTFNDRRYGHYQPNGYGANYPGRNPPGQYPQGMPNEDRFRFDP
NDPNARTQFPGVLAGWREDLQGKQRRDSLTLERDVFVTTNYGQVQGFKVY
MYDNPDPKSFYRPYHSTVDRVMGECSVFLGIPYALPPTFEGRFKPPRVHR
GWQLLQAVDFGPACPQPVRYTGATKGIMDMDEDCLYLNVYSPKTGAGVAQ
KYPVMVYIHGGEFIRGASNLFQGHILASFYDVVVVTLNYRLGALGFLSTG
DENSPGNYGILDQAMALRWVYDNIEFFNGDRNSITLFGPGAGGASAGLLM
VAPQTRNIVRRVIAQSGSALADWALIQDKYRAQNTSRVLGQLLGCSIESS
WKLVNCLRTGRSFYELGNAEFSPQVGSFPWGPVLDHNFTLPGDDWYEGWR
EKDWRFLTQTPETLIRAGKFNRNIQYMTGVTTQEAAFFVAQNESLSPYYE
LDGRFFDQKIREHVFRYNYTLNPNGVYEAIKYIYTFWPDPNNNTIIRDQY
INMLSDLYYRAPVDQMVKLMLEQKVPVYMYVLNTTVEALNLPQWRKYPHD
IERYFLTGAPFMDTEFFPKKEHLQRNMWTDNDRNMSHFFMQTYTNFARYG
NPTPQQVLGMHFQRAYQGEIRYLNINTTYNSSILLNYRQTECAFWTQYLP
TVIGVLVPTYPPTTEYWWEPKEPLQIAFWSMSVACFFLIVLVVICCIMWR
NAKRQSDRFYDEDVFINGEGLEPEQDTRGVDNAHMVTNHHALRSRDNIYE
YRDSPSTKTLASKAHTDTTSLRSPSSLAMTQKSSSQASLKSGISLKETNG
HLVKQSERAATPRSQQNGSTAKVASPPVEEKRLLQPLSSTPVTQLQAEPA
KRVPTAASVSGSSRSTTPVPSARSTTTHTTTATLSSQPAAQPRRTHLVEG
VPQTSVASFLDH

BO31791.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:32:46
Subject Length Description Subject Range Query Range Score Percent Strand
Gli-PF 956 CG3903-PF 1..956 1..956 5164 100 Plus
Gli-PE 956 CG3903-PE 1..956 1..956 5164 100 Plus
Gli-PD 956 CG3903-PD 1..956 1..956 5164 100 Plus
Gli-PC 956 CG3903-PC 1..956 1..956 5164 100 Plus
Gli-PA 956 CG3903-PA 1..956 1..956 5164 100 Plus