Clone BO31827 Report

Search the DGRC for BO31827

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:318
Well:27
Vector:pDNR-Dual
Associated Gene/Transcripteco-RA
Protein status:BO31827.pep: Imported from assembly
Sequenced Size:3190

Clone Sequence Records

BO31827.complete Sequence

3190 bp assembled on 2012-05-15

GenBank Submission: KX794291

> BO31827.complete
GAAGTTATCAGTCGACATGGAGACCCCGACGGGTAGTGGGCGTCCCAGTC
GCATGGCCACTCCGCGCCTTTCGGAGCGCAAGCGGCAACTGTTTGGCAGT
CCCAGATCCAGGCTGCGCCAAATCAACGACGACGAGGATGATGCGGACGT
AGACAGTCTGGGTGTCTTGCCATTAAAGACCCATGTGGCGGCCAACAGGA
AGGGCAGGAGTCTCTTCGCCGCAGTCCCCGGCAAGTCAAGCAGCAGTGCG
AACAGCAGCCCGGAAACCAACAAGGAGAACAAAAAAACCCGTGGCGGAGT
CATGACTGCCACGGCGGAGCAGCTGCCCCAATTGTTTACAGCCACCATGC
GGCTAAATAGCAACAGCAGCAGCAATAGTCGCAACAGCAGCCCCCGTCAG
ACGAGGGTCCAAAGAAAGCGAGCGGATTCTTCAATGTCGTCGCCCACCTC
TTCCTCTGAAGGAACTCCTTCTTCCAGAGCCAGAAATAGCATCAGACGCA
GTCCACGAACCTTCAGTGCGCAAAAGGATCCAGATGCGTTCTCCTCGCCA
GAATCTTTTCAGACTAGGCTAAGCAAGGTGGCAGCTATGCTAATGAAGGG
TCAGGATTCAAGATCAATGTTAGAAAAATCAAAGAAGAAACACAACCACA
GCCTAAAGACCACTGCCCAAGTGCATACAACTAAACCGAAGAAAACGAGC
CCAGCTGAAGAGTCCCAGTCGGACGACGAGAAACCTTCTAGCAGTAAGAA
CTCCAGGAAGAATACAGAAGTTCGTGAAACAAGGAGCTCGCAAATCATCA
GTCCAAAAACCAGGAATAGGCGAAGACCCTTCACGTCGGCGGATATAAAC
TGCAAGACGCTGAAGGCTGCTGCCCATCTACATGAGAACATGAGGTCGTA
TGATGAAGAAAAAACAGCAGCAGTTAAGCTAGAAAACAGCAGAAGCAGAT
CCAAGTCCCCGGTAGAAGTGTTCAAGTCAAATGACGATGCAGTAAAACGA
AACACAGGAAACACCAACAATAAAACAGCGAAATCTTCCGAAGTTGCCAC
AGCAAAAAGGCCAGAAAGCCCAGGAAGTAGTATGAAGATTGATGTCGAAG
TGCCCGAATCGGACGAAGAAGCATCCAATCATAAGCCTCAAAAGCGACAG
CACCCAGAAACGTCCACCCCGGTTGCTCCTTCAGCGGACGCCGACTCTGG
TTCGCCGCAGAGCAAGATGCGCAAGGTGACGCTGAGCAGCAGCATTCCCA
CCATGGCCTTCTATTCCCACAGTGGAGAAGCGGTCACAAAGTCAAGAAGG
CGGCCGTCCATATCCAAGAATTCGCTTAAACAACCAACGAAAATCTCGCC
AACCTCCCGTCCACTATTGGGCATTAATAAGGGAGTTCACCACAAAATAC
GCAAGCGTCACGGTTTTGCCAACCGACTGCCAGCCACCGATATGGACAAC
ATTCTCAACTCGCTGAGCAACGAACGGCTCAAGAACCTGATCACCACCAA
GCGTGAAGAGCGCGCCAAAGTGGAGGAAGTCCACCAGATTCTCCGTAATG
CCAAGGACCCGATCAAAATGGCCAAACCATTGAGTGTGATTGAAGCCGAC
GATGCTAACAACAATAACAATCTGCCAGCAACCGCATGGCAAGAAACTTC
CGCCGATTTCTCCGATCTTAGTGATGTCGAAGACATTGATCCCATCATCG
AGGTGGAGCCTATCATACCAATAATTCGCCACGAGCCGGTCCAGAAATCC
CCAACCGCCGAGCCAGCCGATCTAAGCAAACGAAAGTTCTTCAAATCGGG
CCGCCGTAGTAGCACCTGCATGGAGGTGAGAATCACGGACAACATCCGGG
CCAGCGTCAGCCAGGGCAAGATTGAACTCGTCCAAACGATACGCCGTAAG
CCGCGGCAAGTGCGCGTCAAGTCGGCCACGATATTTTCCGCCGAGCAGGC
GACTGTGGATGCGATCCTAAAGAATCTGGACGATACGGTGGTTGATGAGA
TTGTAGAAGCGAATCCGGTGGTACAGGCAACGCCCATTGATGCGGAGGAG
ACGACCATGGAAACGGAGTCGCTACCGGATATAATTGAGTATGCCCCAGA
GGCGAACGATGTGGAAATTGATCCCTTTGCTGAGTTCCGTCAACGTTTGC
CATACCAAACCGATGATCCCAATGTCGTGGAGCAACAGCAAATTTTACTA
GAGTTTCTCATTAGCAACAATATTTGCACCGAAAAGAACTTTGAGATATT
TATTGCAAATCCGGATGACTACAAGGACGAGGCCAATCAAATTGTGGACA
ATTTATACATGGTGGTGAACAGCGAGGAGGCTGCGCAGCTTGCTCAGATG
GAAACAGTGGAAAATACAGCGGTGGCCATTGCACCAAAACAGGATGCGCC
AGCAGTAGAGGAAGTTCAGCCAAAGCTTTTCCCCATATTCACTCAACGCT
TACAGCCCGTTGTCCAGAAATCGTTGCGGCGTCGGCCGGATACATCGATG
AGATTGCTAACGGCGGCGGGTGGATCGAATCAGTACCAGATCGATGCTGG
TCAAAAGGCCTTCGGAGCACGGCAGTGCCAGCAGTGCGGATTGGTGTACA
CCGTGCACGAGCCGGAGGAGGAGCTGCTTCATCGCGAGTACCACAATTCC
ATCCATGTGCTGCGCTTCAAGGGCTGGATCGACGAGGACATTGTGTCCGT
TTATCCAGAATGGGCCAGCGACGGGCGCATCATACGGATCAACGAACGCG
CTCCGACAGCTCGGCTCGACAGACTGCGGGATCTCATTGGTGTGGTGGAC
AAAGAGCTGGGCTATTCCTCGTACATTGTGCCAAAGATCTTTGTAGCCTT
CATAGCAGTGCGCAAGCAGCAGATCGTAGGCTTCTGCCTGGTGCAGCCCC
TCTCGCAGGCCCATCGTTTCATCCAGGTCGATGGCACGGACTACTTCAGC
GAGGAAAGCTACCCGGCCAGCTGCGGCGTCTCACGCATCTGGGTTTCTCC
GCTGCAGCGACGCAGCGGGATCGCCAGCAAGCTGCTGCGAGTCGTCCAGT
GCCACACGGTGCTCGGTCAAGAGATCGCTAGGGAGTGCATTGCCTTCAGT
ACGCCCACCGACGATGGTCGGGCTCTGGCACGCCAGTTCACCGGGTTGGA
TAACTTCCTCACCTACGACCAGGCAAGCTTTCTAGACCAT

BO31827.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:18:21
Subject Length Description Subject Range Query Range Score Percent Strand
eco-RB 3159 CG8598-PB 1..3156 17..3172 15780 100 Plus
eco-RA 3159 CG8598-PA 1..3156 17..3172 15780 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:18:23
Subject Length Description Subject Range Query Range Score Percent Strand
eco-RB 3485 CG8598-RB 97..3253 16..3172 15785 100 Plus
eco-RA 3654 CG8598-RA 266..3422 16..3172 15785 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:18:18
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 7335938..7338892 2970..16 14775 100 Minus
3L 28110227 3L 7335674..7335878 3172..2968 1025 100 Minus
Blast to na_te.dros performed 2014-11-28 11:18:19
Subject Length Description Subject Range Query Range Score Percent Strand
roo 9092 roo DM_ROO 9092bp 1107..1142 356..391 135 86.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2338..2373 356..391 126 83.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 1529..1588 338..395 123 71.7 Plus
roo 9092 roo DM_ROO 9092bp 1094..1130 355..391 122 81.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6729..6761 359..391 120 84.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6750..6782 359..391 120 84.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6771..6803 359..391 120 84.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6804..6836 359..391 120 84.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6713..6824 280..391 116 62.6 Plus
gypsy11 4428 gypsy11 GYPSY11 4428bp 886..1005 268..391 116 56.5 Plus

BO31827.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-15 10:36:23 Download gff for BO31827.complete
Subject Subject Range Query Range Percent Splice Strand
eco-RB 98..3253 17..3174 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:19:23 Download gff for BO31827.complete
Subject Subject Range Query Range Percent Splice Strand
eco-RA 267..3422 17..3174 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:40:05 Download gff for BO31827.complete
Subject Subject Range Query Range Percent Splice Strand
eco-RA 267..3422 17..3174 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:40:05 Download gff for BO31827.complete
Subject Subject Range Query Range Percent Splice Strand
3L 7335671..7335875 2971..3174 99 <- Minus
3L 7335938..7338891 17..2970 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:19:23 Download gff for BO31827.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 7329038..7331991 17..2970 100   Minus
arm_3L 7328771..7328975 2971..3174 99 <- Minus

BO31827.pep Sequence

Translation from 16 to 3190

> BO31827.pep
METPTGSGRPSRMATPRLSERKRQLFGSPRSRLRQINDDEDDADVDSLGV
LPLKTHVAANRKGRSLFAAVPGKSSSSANSSPETNKENKKTRGGVMTATA
EQLPQLFTATMRLNSNSSSNSRNSSPRQTRVQRKRADSSMSSPTSSSEGT
PSSRARNSIRRSPRTFSAQKDPDAFSSPESFQTRLSKVAAMLMKGQDSRS
MLEKSKKKHNHSLKTTAQVHTTKPKKTSPAEESQSDDEKPSSSKNSRKNT
EVRETRSSQIISPKTRNRRRPFTSADINCKTLKAAAHLHENMRSYDEEKT
AAVKLENSRSRSKSPVEVFKSNDDAVKRNTGNTNNKTAKSSEVATAKRPE
SPGSSMKIDVEVPESDEEASNHKPQKRQHPETSTPVAPSADADSGSPQSK
MRKVTLSSSIPTMAFYSHSGEAVTKSRRRPSISKNSLKQPTKISPTSRPL
LGINKGVHHKIRKRHGFANRLPATDMDNILNSLSNERLKNLITTKREERA
KVEEVHQILRNAKDPIKMAKPLSVIEADDANNNNNLPATAWQETSADFSD
LSDVEDIDPIIEVEPIIPIIRHEPVQKSPTAEPADLSKRKFFKSGRRSST
CMEVRITDNIRASVSQGKIELVQTIRRKPRQVRVKSATIFSAEQATVDAI
LKNLDDTVVDEIVEANPVVQATPIDAEETTMETESLPDIIEYAPEANDVE
IDPFAEFRQRLPYQTDDPNVVEQQQILLEFLISNNICTEKNFEIFIANPD
DYKDEANQIVDNLYMVVNSEEAAQLAQMETVENTAVAIAPKQDAPAVEEV
QPKLFPIFTQRLQPVVQKSLRRRPDTSMRLLTAAGGSNQYQIDAGQKAFG
ARQCQQCGLVYTVHEPEEELLHREYHNSIHVLRFKGWIDEDIVSVYPEWA
SDGRIIRINERAPTARLDRLRDLIGVVDKELGYSSYIVPKIFVAFIAVRK
QQIVGFCLVQPLSQAHRFIQVDGTDYFSEESYPASCGVSRIWVSPLQRRS
GIASKLLRVVQCHTVLGQEIARECIAFSTPTDDGRALARQFTGLDNFLTY
DQASFLDH

BO31827.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:32:54
Subject Length Description Subject Range Query Range Score Percent Strand
eco-PB 1052 CG8598-PB 1..1052 1..1052 5334 100 Plus
eco-PA 1052 CG8598-PA 1..1052 1..1052 5334 100 Plus
CG14692-PE 2851 CG14692-PE 1008..1523 70..594 168 20.4 Plus
futsch-PF 5495 CG34387-PF 3414..4058 76..688 165 19.6 Plus
futsch-PE 5495 CG34387-PE 3414..4058 76..688 165 19.6 Plus