BO31833.complete Sequence
1408 bp assembled on 2012-04-25
GenBank Submission: KX798352
> BO31833.complete
GAAGTTATCAGTCGACATGGAGGTGGAAAGCCCGGAACACACGCGCGACT
TCGCCGAGGTAGACATCAATAACGGTGCGGCCACAGGATCGGAAGACGAG
GAGGAGGAGGTGCCAGCGCCCGGCAGCGTAACTCTGGATCGCAACGAAAG
TGATCTCTTCGTGTCGGCCTTGAGTCCCAGCAGCATCGGGGATATACACC
CGCTGCAGGAAGTGCTCACCGACGACGGCGACTACTTCATCAGCATCGTG
GTCTCGGATCCGCAGAAAATCGGCGATGGCATGGGCTCCTATTTGGCCTA
CAAGGTAACGACCAAAACGAACATTCCCAAATTCAAGCGTAGCGAGTTCA
GTACTCTGCGCCGCTTCAGCGATTTCCTTGGCATCCATGATCTGCTTGTG
GGCAAGTACATGCGGCTGGGCCGCATCATACCGCCGGCGCCCTCCAAGAA
CATCATAGGCAGCACCAAGGTGAAGATTAGCCCGCAGCAAAGCGAACCGG
GCACGCCCATGACCCAGGAATGGGTGGAGATCCGCCGGGCGGCCCTCGAG
CGATTCGTCCACCGTACCGCCCAGCATCCGGTGCTGCGCGTCGATCTGGA
TTTCATGAACTTCCTGGAGAGCGACCAGGAGCTGCCGCGTTCAGTGAATA
CCTCTGCGCTCAGTGGAGCCGGCGTCATCCGCCTGTTTAACAAAGTTGGC
GAAACTGTGAACAAGATTACCTACAAAATGGACGAGAACGATCCGTGGTT
CGACGACAAGATCACCGAGGTGGAGAGCCTGGACGCCAATCTGCAGAAGC
TGCACAATGCCATGAAATCGCTGGTCACGTCGCGTCGTGAGCTGTCGCTG
CTCACCGGCTTGGTGGCCAAGTCGGCGGCCATGCTGAGCACTTGCGAGGA
GCACACAGGCCTCTCCAGAGCGCTGTCCAACCTGGCGGACGTGGAGGAGA
AGATAGAGCTACTGCGCTCCGAGCAGGCCAATTCGGACTTCTTCATTCTG
GCCGAGTTTATCAAGGATTACCTGGGCCTGTTTGGCGCCATCAAGTGCAT
TTTTCATGAGCGCGTCAAGGCTTTCCAGAACTGGCAGTACGCACAAATGC
AGTTGTCCAAGCGGCGTGAGAACCGTGGACGCTTCGAGCTAGCCAATAGG
GCGGACAAGCTGGATCAGGCCCAGCAGGAAGTGGACGAGTGGCAGGGAAA
GGTTCAGCGCTGTCAGCAGCAGTTCGACGACATTTCGGCGGAAATTAAGC
GTGAGATGGAGCGTTTCGAATTGACCAGAGTTAAAGACTTTAAAGTAAAC
ATTATCAAGTATATAGAAGACCAAATGGCGCATCAGCAACAGATCGTCAG
CTATTGGGAGGCCTTTGCTCCGTTTGCCCGCGAAATCGTTGCAAGCTTTC
TAGACCAT
BO31833.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 07:35:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Snx1-RA | 1377 | CG2774-PA | 1..1374 | 17..1390 | 6870 | 100 | Plus |
Snx1-RB | 1371 | CG2774-PB | 1..1368 | 17..1390 | 6745 | 99.6 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 07:35:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Snx1-RA | 2028 | CG2774-RA | 113..1486 | 17..1390 | 6870 | 100 | Plus |
Snx1-RB | 2022 | CG2774-RB | 113..1480 | 17..1390 | 6745 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 07:35:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 3450358..3451243 | 304..1189 | 4430 | 100 | Plus |
2L | 23513712 | 2L | 3449795..3449977 | 17..199 | 915 | 100 | Plus |
2L | 23513712 | 2L | 3451299..3451453 | 1188..1342 | 775 | 100 | Plus |
2L | 23513712 | 2L | 3450185..3450289 | 200..304 | 525 | 100 | Plus |
2L | 23513712 | 2L | 3451514..3451564 | 1340..1390 | 255 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 07:35:48 has no hits.
BO31833.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-25 14:07:21 Download gff for
BO31833.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2774-RA | 110..1483 | 17..1392 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:41:06 Download gff for
BO31833.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Snx1-RA | 113..1486 | 17..1392 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:59:51 Download gff for
BO31833.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Snx1-RA | 113..1486 | 17..1392 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 08:59:51 Download gff for
BO31833.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 3449795..3449977 | 17..199 | 100 | -> | Plus |
2L | 3450185..3450288 | 200..303 | 100 | -> | Plus |
2L | 3450358..3451243 | 304..1189 | 100 | -> | Plus |
2L | 3451301..3451453 | 1190..1342 | 100 | -> | Plus |
2L | 3451517..3451564 | 1343..1392 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:41:06 Download gff for
BO31833.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 3449795..3449977 | 17..199 | 100 | -> | Plus |
arm_2L | 3450185..3450288 | 200..303 | 100 | -> | Plus |
arm_2L | 3450358..3451243 | 304..1189 | 100 | -> | Plus |
arm_2L | 3451301..3451453 | 1190..1342 | 100 | -> | Plus |
arm_2L | 3451517..3451564 | 1343..1392 | 96 | | Plus |
BO31833.pep Sequence
Translation from 16 to 1408
> BO31833.pep
MEVESPEHTRDFAEVDINNGAATGSEDEEEEVPAPGSVTLDRNESDLFVS
ALSPSSIGDIHPLQEVLTDDGDYFISIVVSDPQKIGDGMGSYLAYKVTTK
TNIPKFKRSEFSTLRRFSDFLGIHDLLVGKYMRLGRIIPPAPSKNIIGST
KVKISPQQSEPGTPMTQEWVEIRRAALERFVHRTAQHPVLRVDLDFMNFL
ESDQELPRSVNTSALSGAGVIRLFNKVGETVNKITYKMDENDPWFDDKIT
EVESLDANLQKLHNAMKSLVTSRRELSLLTGLVAKSAAMLSTCEEHTGLS
RALSNLADVEEKIELLRSEQANSDFFILAEFIKDYLGLFGAIKCIFHERV
KAFQNWQYAQMQLSKRRENRGRFELANRADKLDQAQQEVDEWQGKVQRCQ
QQFDDISAEIKREMERFELTRVKDFKVNIIKYIEDQMAHQQQIVSYWEAF
APFAREIVASFLDH
BO31833.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:22:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Snx1-PA | 458 | CG2774-PA | 1..458 | 1..458 | 2341 | 100 | Plus |
Snx1-PB | 456 | CG2774-PB | 1..456 | 1..458 | 2312 | 99.6 | Plus |
Snx6-PB | 455 | CG8282-PB | 35..443 | 33..446 | 231 | 21.4 | Plus |
Snx6-PA | 449 | CG8282-PA | 35..437 | 33..446 | 222 | 21 | Plus |