BO31894.complete Sequence
1003 bp assembled on 2012-04-25
GenBank Submission: KX798720
> BO31894.complete
GAAGTTATCAGTCGACATGCACGAGAGACAAGTGAAGAAGTTGAAGGGCA
GCCATTATGTGGCCACGCACGGTCGCCTCACTCCGGATCCGCCCTACGTC
CACTCGAACCGCGGCTATTCCACCGACGGCGATGAGACCCACTCCCACCG
GGCGCCCTCGGAGCGCACCTATTCGGAGTACACGTTGACCCACGAGCGCA
TCTCGCCGCAGTACAATGGTTCGCGCAAGAAGCGCTCCTCATCCTCGAAT
GGAAACCATCAGCATCAGCACCTGCAGAGCAGCTACAGCCACAGTCAGAT
GGGCCTCTCCAGTTCGCCGGACAACGGAGGACCTCGCTCCCTCAGCGGAC
CGCCGCCCACGCGCCAGCCACCGCGTGCTCCGTCCGCCCTGAGCTATGAC
CAGGCTGGTGACGCCGGCAGCGACATATATGTGACCAGTGCCGCCTACAA
GGCGCCCTCCGAGATCAGTCGCTACAGTCAGCGTCCAGTGTCGCGAGGAG
CTCCACGGAGTGTTTACTCCGTGGCCAGTACGGCCAAAACCGGACGCAGT
GCGCGCTCGACGACTCGGCGAGGCGCCAAAGTGGAAACCATGTCCGCGCC
GAATCCATTTTGCCCCAATGTCAAGGGCGTGTGCTGTCTGATGCTGTTGC
TCAACTTGGGCCTGATCCTGGTGACGCTAGGATTCGTCATTGTGGTGCAG
TTCTATGAGCCACTGTACGTGTGGATACTGGGAATTGTGTTCCTGGTCTT
CGGCTTCCTCACGCTAATCGGCTGCATGATCTACTGTGTGTACGTGTTCC
GGGATGCGAAGACGCCATCGCAGGTGCGCAACGAGGATCTCTACTGGACG
CGGCACTGGCAGAAGAATATCGGATACACGCCGCAGGAGATCAACTACAA
GGCGGACAAGTACGATGCCTACTCGGATCGCTATTCGGTTAGCAAGCTGA
GTGGCAAATACTCGGATCGCGAGAGCCAGCGATACGCAAGCTTTCTAGAC
CAT
BO31894.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 07:35:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14830-RC | 972 | CG14830-PC | 1..969 | 17..985 | 4830 | 99.9 | Plus |
| CG14830-RB | 972 | CG14830-PB | 1..969 | 17..985 | 4830 | 99.9 | Plus |
| CG14830-RA | 972 | CG14830-PA | 1..969 | 17..985 | 4830 | 99.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 07:36:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14830-RC | 1773 | CG14830-RC | 421..1389 | 17..985 | 4830 | 99.9 | Plus |
| CG14830-RB | 2038 | CG14830-RB | 686..1654 | 17..985 | 4830 | 99.9 | Plus |
| CG14830-RA | 1776 | CG14830-RA | 424..1392 | 17..985 | 4830 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 07:35:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 7251102..7251621 | 985..466 | 2600 | 100 | Minus |
| 3L | 28110227 | 3L | 7251680..7252108 | 468..40 | 2130 | 99.8 | Minus |
Blast to na_te.dros performed on 2014-11-28 07:35:58 has no hits.
BO31894.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-25 14:07:21 Download gff for
BO31894.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14830-RA | 421..1389 | 17..987 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:41:07 Download gff for
BO31894.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14830-RA | 424..1392 | 17..987 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:59:54 Download gff for
BO31894.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14830-RA | 424..1392 | 17..987 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 08:59:54 Download gff for
BO31894.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 7251099..7251618 | 469..987 | 99 | <- | Minus |
| 3L | 7251680..7252108 | 40..468 | 99 | <- | Minus |
| 3L | 7252176..7252198 | 17..39 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:41:07 Download gff for
BO31894.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 7244199..7244718 | 469..987 | 99 | <- | Minus |
| arm_3L | 7244780..7245208 | 40..468 | 99 | <- | Minus |
| arm_3L | 7245276..7245298 | 17..39 | 100 | | Minus |
BO31894.pep Sequence
Translation from 16 to 1003
> BO31894.pep
MHERQVKKLKGSHYVATHGRLTPDPPYVHSNRGYSTDGDETHSHRAPSER
TYSEYTLTHERISPQYNGSRKKRSSSSNGNHQHQHLQSSYSHSQMGLSSS
PDNGGPRSLSGPPPTRQPPRAPSALSYDQAGDAGSDIYVTSAAYKAPSEI
SRYSQRPVSRGAPRSVYSVASTAKTGRSARSTTRRGAKVETMSAPNPFCP
NVKGVCCLMLLLNLGLILVTLGFVIVVQFYEPLYVWILGIVFLVFGFLTL
IGCMIYCVYVFRDAKTPSQVRNEDLYWTRHWQKNIGYTPQEINYKADKYD
AYSDRYSVSKLSGKYSDRESQRYASFLDH
BO31894.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:22:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14830-PC | 323 | CG14830-PC | 1..323 | 1..323 | 1721 | 100 | Plus |
| CG14830-PB | 323 | CG14830-PB | 1..323 | 1..323 | 1721 | 100 | Plus |
| CG14830-PA | 323 | CG14830-PA | 1..323 | 1..323 | 1721 | 100 | Plus |
