Clone BO31895 Report

Search the DGRC for BO31895

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:318
Well:95
Vector:pDNR-Dual
Associated Gene/Transcriptslp2-RA
Protein status:BO31895.pep: Imported from assembly
Sequenced Size:1387

Clone Sequence Records

BO31895.complete Sequence

1387 bp assembled on 2012-05-15

GenBank Submission: KX797292

> BO31895.complete
GAAGTTATCAGTCGACATGGTGAAGATCGAGGAAGGTCTGCCGTCCAGCG
AGATTAGCGCTCACAGTCTCCACTTTCAGCACCATCACCACCCACTGCCG
CCCACCACTCACCATTCCGCGCTCCAAAGTCCCCATCCCGTCGGGCTGAA
TCTCACCAATCTAATGAAAATGGCCAGGACACCACATTTGAAGTCCAGCT
TTTCCATTAATTCCATTCTACCCGAGACTGTGGAGCATCACGACGAGGAT
GAGGAAGAGGATGTCGAGAAGAAATCACCAGCGAAATTTCCGCCCAACCA
TAATAATAACAATCTGAATACCACGAACTGGGGATCGCCAGAGGATCATG
AGGCGGAAAGCGATCCCGAATCGGATCTCGATGTGACCTCCATGTCACCG
GCTCCCGTTGCGAATCCCAATGAAAGCGATCCGGATGAAGTCGACGAGGA
GTTCGTGGAGGAGGATATCGAATGTGATGGGGAGACAACCGATGGCGATG
CGGAAAATAAATCGAACGATGGCAAGCCGGTGAAGGATAAGAAAGGCAAC
GAAAAGCCACCTTACAGCTACAATGCCCTAATCATGATGGCCATTCGTCA
GAGTTCCGAGAAGCGTCTAACCCTGAATGGCATCTACGAGTACATAATGA
CCAATCATCCATACTACCGGGACAACAAACAGGGCTGGCAGAACTCCATA
AGACATAACTTGAGCCTGAATAAGTGTTTCGTCAAGGTGCCAAGACACTA
TGATGATCCTGGCAAGGGCAACTACTGGATGTTGGATCCCTCGGCGGAAG
ACGTATTCATTGGCGGATCGACGGGGAAGCTGAGGAGGAGAACCACAGCC
GCCTCTCGCTCCCGACTGGCCGCCTTCAAGAGATCCCTGATAGGACCCAT
GTTCCCGGGACTGGCTGCCTATCCGCAGTTTGGACAATTTCTTACCTATC
CTCCGACGGCGCCTAGCTTGCTGGCCAGCATGTATCAGCGTTATAATCCC
TTCGCCCCGAAAGGTGGACCAGGACATCCAGGCTTGCCACCGGGCTTGCC
GGGATTACCCGGACCACCGGGACCTCAAGGACCGCCAGGACCACCACCAC
CGCCCTTCGTCGCACCACCCACGAGCAGTGAGCTCTACCAGCGATTGCAG
TACCAACAGCTGTTGCATCAACATGCGGCAGCCGCCGCTCTGGCGGCTCA
TCAAAGGCAACTCTCGGTGGCGGCAGCATCGGCGGCGTCACAACCACCGC
CCACCCATCACCACCCACACCTGGCGGTGGGTCAGGCGCCCCTTTCGCCT
GGCGGCGATTCCCCGGGACCCTCGCCACAGCCTCTTCACAAACCCGTCAC
CGTAGTCTCCCGCAATAGCGCAAGCTTTCTAGACCAT

BO31895.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 12:56:58
Subject Length Description Subject Range Query Range Score Percent Strand
slp2-RA 1356 CG2939-PA 1..1353 17..1369 6765 100 Plus
slp1-RA 969 CG16738-PA 367..639 563..835 375 75.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:56:59
Subject Length Description Subject Range Query Range Score Percent Strand
slp2-RA 2346 CG2939-RA 358..1711 16..1369 6770 100 Plus
slp1-RA 1425 CG16738-RA 476..748 563..835 375 75.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 12:56:56
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 3837197..3838550 16..1369 6770 100 Plus
2L 23513712 2L 3826150..3826422 563..835 375 75.8 Plus
Blast to na_te.dros performed on 2014-11-28 12:56:56 has no hits.

BO31895.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-15 10:35:50 Download gff for BO31895.complete
Subject Subject Range Query Range Percent Splice Strand
slp2-RA 357..1709 17..1371 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:49:00 Download gff for BO31895.complete
Subject Subject Range Query Range Percent Splice Strand
slp2-RA 359..1711 17..1371 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:17:38 Download gff for BO31895.complete
Subject Subject Range Query Range Percent Splice Strand
slp2-RA 359..1711 17..1371 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:17:38 Download gff for BO31895.complete
Subject Subject Range Query Range Percent Splice Strand
2L 3837198..3838550 17..1371 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:49:00 Download gff for BO31895.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 3837198..3838550 17..1371 99   Plus

BO31895.pep Sequence

Translation from 16 to 1387

> BO31895.pep
MVKIEEGLPSSEISAHSLHFQHHHHPLPPTTHHSALQSPHPVGLNLTNLM
KMARTPHLKSSFSINSILPETVEHHDEDEEEDVEKKSPAKFPPNHNNNNL
NTTNWGSPEDHEAESDPESDLDVTSMSPAPVANPNESDPDEVDEEFVEED
IECDGETTDGDAENKSNDGKPVKDKKGNEKPPYSYNALIMMAIRQSSEKR
LTLNGIYEYIMTNHPYYRDNKQGWQNSIRHNLSLNKCFVKVPRHYDDPGK
GNYWMLDPSAEDVFIGGSTGKLRRRTTAASRSRLAAFKRSLIGPMFPGLA
AYPQFGQFLTYPPTAPSLLASMYQRYNPFAPKGGPGHPGLPPGLPGLPGP
PGPQGPPGPPPPPFVAPPTSSELYQRLQYQQLLHQHAAAAALAAHQRQLS
VAAASAASQPPPTHHHPHLAVGQAPLSPGGDSPGPSPQPLHKPVTVVSRN
SASFLDH

BO31895.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:29:24
Subject Length Description Subject Range Query Range Score Percent Strand
slp2-PA 451 CG2939-PA 1..451 1..451 2458 100 Plus
slp1-PA 322 CG16738-PA 9..271 59..330 563 45 Plus
fd19B-PA 260 CG9571-PA 33..152 155..274 350 56.7 Plus
croc-PA 508 CG5069-PA 70..165 180..275 349 66.7 Plus
fd59A-PA 456 CG3668-PA 54..201 143..297 333 45.2 Plus