BO31895.complete Sequence
1387 bp assembled on 2012-05-15
GenBank Submission: KX797292
> BO31895.complete
GAAGTTATCAGTCGACATGGTGAAGATCGAGGAAGGTCTGCCGTCCAGCG
AGATTAGCGCTCACAGTCTCCACTTTCAGCACCATCACCACCCACTGCCG
CCCACCACTCACCATTCCGCGCTCCAAAGTCCCCATCCCGTCGGGCTGAA
TCTCACCAATCTAATGAAAATGGCCAGGACACCACATTTGAAGTCCAGCT
TTTCCATTAATTCCATTCTACCCGAGACTGTGGAGCATCACGACGAGGAT
GAGGAAGAGGATGTCGAGAAGAAATCACCAGCGAAATTTCCGCCCAACCA
TAATAATAACAATCTGAATACCACGAACTGGGGATCGCCAGAGGATCATG
AGGCGGAAAGCGATCCCGAATCGGATCTCGATGTGACCTCCATGTCACCG
GCTCCCGTTGCGAATCCCAATGAAAGCGATCCGGATGAAGTCGACGAGGA
GTTCGTGGAGGAGGATATCGAATGTGATGGGGAGACAACCGATGGCGATG
CGGAAAATAAATCGAACGATGGCAAGCCGGTGAAGGATAAGAAAGGCAAC
GAAAAGCCACCTTACAGCTACAATGCCCTAATCATGATGGCCATTCGTCA
GAGTTCCGAGAAGCGTCTAACCCTGAATGGCATCTACGAGTACATAATGA
CCAATCATCCATACTACCGGGACAACAAACAGGGCTGGCAGAACTCCATA
AGACATAACTTGAGCCTGAATAAGTGTTTCGTCAAGGTGCCAAGACACTA
TGATGATCCTGGCAAGGGCAACTACTGGATGTTGGATCCCTCGGCGGAAG
ACGTATTCATTGGCGGATCGACGGGGAAGCTGAGGAGGAGAACCACAGCC
GCCTCTCGCTCCCGACTGGCCGCCTTCAAGAGATCCCTGATAGGACCCAT
GTTCCCGGGACTGGCTGCCTATCCGCAGTTTGGACAATTTCTTACCTATC
CTCCGACGGCGCCTAGCTTGCTGGCCAGCATGTATCAGCGTTATAATCCC
TTCGCCCCGAAAGGTGGACCAGGACATCCAGGCTTGCCACCGGGCTTGCC
GGGATTACCCGGACCACCGGGACCTCAAGGACCGCCAGGACCACCACCAC
CGCCCTTCGTCGCACCACCCACGAGCAGTGAGCTCTACCAGCGATTGCAG
TACCAACAGCTGTTGCATCAACATGCGGCAGCCGCCGCTCTGGCGGCTCA
TCAAAGGCAACTCTCGGTGGCGGCAGCATCGGCGGCGTCACAACCACCGC
CCACCCATCACCACCCACACCTGGCGGTGGGTCAGGCGCCCCTTTCGCCT
GGCGGCGATTCCCCGGGACCCTCGCCACAGCCTCTTCACAAACCCGTCAC
CGTAGTCTCCCGCAATAGCGCAAGCTTTCTAGACCAT
BO31895.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 12:56:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
slp2-RA | 1356 | CG2939-PA | 1..1353 | 17..1369 | 6765 | 100 | Plus |
slp1-RA | 969 | CG16738-PA | 367..639 | 563..835 | 375 | 75.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:56:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
slp2-RA | 2346 | CG2939-RA | 358..1711 | 16..1369 | 6770 | 100 | Plus |
slp1-RA | 1425 | CG16738-RA | 476..748 | 563..835 | 375 | 75.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 12:56:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 3837197..3838550 | 16..1369 | 6770 | 100 | Plus |
2L | 23513712 | 2L | 3826150..3826422 | 563..835 | 375 | 75.8 | Plus |
Blast to na_te.dros performed on 2014-11-28 12:56:56 has no hits.
BO31895.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-15 10:35:50 Download gff for
BO31895.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
slp2-RA | 357..1709 | 17..1371 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:49:00 Download gff for
BO31895.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
slp2-RA | 359..1711 | 17..1371 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:17:38 Download gff for
BO31895.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
slp2-RA | 359..1711 | 17..1371 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:17:38 Download gff for
BO31895.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 3837198..3838550 | 17..1371 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:49:00 Download gff for
BO31895.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 3837198..3838550 | 17..1371 | 99 | | Plus |
BO31895.pep Sequence
Translation from 16 to 1387
> BO31895.pep
MVKIEEGLPSSEISAHSLHFQHHHHPLPPTTHHSALQSPHPVGLNLTNLM
KMARTPHLKSSFSINSILPETVEHHDEDEEEDVEKKSPAKFPPNHNNNNL
NTTNWGSPEDHEAESDPESDLDVTSMSPAPVANPNESDPDEVDEEFVEED
IECDGETTDGDAENKSNDGKPVKDKKGNEKPPYSYNALIMMAIRQSSEKR
LTLNGIYEYIMTNHPYYRDNKQGWQNSIRHNLSLNKCFVKVPRHYDDPGK
GNYWMLDPSAEDVFIGGSTGKLRRRTTAASRSRLAAFKRSLIGPMFPGLA
AYPQFGQFLTYPPTAPSLLASMYQRYNPFAPKGGPGHPGLPPGLPGLPGP
PGPQGPPGPPPPPFVAPPTSSELYQRLQYQQLLHQHAAAAALAAHQRQLS
VAAASAASQPPPTHHHPHLAVGQAPLSPGGDSPGPSPQPLHKPVTVVSRN
SASFLDH
BO31895.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:29:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
slp2-PA | 451 | CG2939-PA | 1..451 | 1..451 | 2458 | 100 | Plus |
slp1-PA | 322 | CG16738-PA | 9..271 | 59..330 | 563 | 45 | Plus |
fd19B-PA | 260 | CG9571-PA | 33..152 | 155..274 | 350 | 56.7 | Plus |
croc-PA | 508 | CG5069-PA | 70..165 | 180..275 | 349 | 66.7 | Plus |
fd59A-PA | 456 | CG3668-PA | 54..201 | 143..297 | 333 | 45.2 | Plus |