BO31914.complete Sequence
1285 bp assembled on 2012-10-18
GenBank Submission: KX796865
> BO31914.complete
GAAGTTATCAGTCGACATGGATCCCGACTGTTTTGCGATGTCCTCGTACC
AGTTCGTCAACTCGCTGGCCTCCTGTTATCCGCAGCAGATGAATCCGCAG
CAGAATCACCCGGGAGCGGGAAATTCGAGTGCAGGCGGCAGCGGTGGAGG
GGCGGGCGGTAGCGGGGGCGTGGTGCCCAGCGGCGGAACGAACGGCGGTC
AGGGCAGTGCGGGGGCGGCCACTCCGGGGGCGAACGACTACTTCCCAGCC
GCGGCGGCCTATACGCCTAACCTGTATCCAAACACACCGCAGGCCCACTA
CGCCAATCAGGCGGCCTACGGCGGACAGGGAAATCCGGATATGGTGGACT
ACACGCAGCTACAGCCGCAGCGACTGCTCCTGCAGCAGCAGCAGCAACAG
CAACAGCAGCAACATGCCCATGCAGCGGCAGCAGTTGCTGCCCAGCAGCA
GCAGCAACTCGCCCAGCAGCAACACCCGCAACAGCAGCAACAGCAGCAGC
AGGCGAACATCAGTTGCAAGTACGCCAACGATCCAGTGACGCCGGGCGGA
AGTGGGGGCGGGGGTGTTTCCGGTAGCAACAACAATAACAATAGCGCCAA
CAGCAACAACAACAACAGCCAGTCGCTAGCCAGTCCACAGGATCTGTCCA
CCAGGGACATATCGCCCAAACTGTCGCCCAGCTCAGTGGTAGAGAGTGTG
GCCCGATCGCTGAACAAGGGCGTCCTGGGCGGAAGCTTGGCGGCCGCCGC
TGCCGCCGCCGGCTTGAACAACAACCACAGCGGATCGGGAGTGTCCGGAG
GACCTGGAAACGTCAATGTTCCCATGCACAGTCCGGGGGGCGGGGATTCG
GACTCCGAGAGCGATAGCGGCAATGAGGCGGGCAGTAGCCAGAACAGCGG
CAATGGAAAGAAGAACCCGCCGCAGATATATCCGTGGATGAAGCGAGTAC
ATCTCGGGACGAGTACTGTGAATGCCAATGGCGAGACGAAACGACAACGG
ACCTCATACACCCGCTACCAGACGCTGGAGCTGGAGAAGGAGTTCCACTT
CAACCGCTACCTGACCCGCCGCCGCAGAATCGAGATCGCGCATGCCCTGT
GTCTCACGGAGCGGCAGATCAAGATCTGGTTCCAGAACCGGCGCATGAAG
TGGAAGAAGGAGCACAAGATGGCCTCGATGAACATCGTACCCTACCACAT
GGGTCCATATGGCCACCCGTACCACCAGTTCGATATCCATCCGTCGCAGT
TCGCGCACCTAAGCGCAGCAAGCTTTCTAGACCAT
BO31914.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 12:53:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Scr-RB | 1254 | CG1030-PB | 1..1251 | 17..1267 | 6255 | 100 | Plus |
Scr-RA | 1254 | CG1030-PA | 1..1251 | 17..1267 | 6255 | 100 | Plus |
Antp-RK | 1086 | CG1028-PK | 857..1021 | 1005..1169 | 540 | 88.5 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:53:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Scr-RB | 3987 | CG1030-RB | 472..1722 | 17..1267 | 6255 | 100 | Plus |
Scr-RA | 4140 | CG1030-RA | 625..1875 | 17..1267 | 6255 | 100 | Plus |
Antp-RK | 4851 | CG1028-RK | 2587..2751 | 1005..1169 | 540 | 88.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 12:53:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 6841233..6842180 | 964..17 | 4740 | 100 | Minus |
3R | 32079331 | 3R | 6825385..6825689 | 1267..963 | 1525 | 100 | Minus |
3R | 32079331 | 3R | 6898353..6898517 | 1169..1005 | 540 | 88.5 | Minus |
3R | 32079331 | 3R | 16658883..16659040 | 1162..1005 | 490 | 87.3 | Minus |
3R | 32079331 | 3R | 6801011..6801190 | 989..1168 | 450 | 83.3 | Plus |
3R | 32079331 | 3R | 6865321..6865475 | 1007..1161 | 400 | 83.9 | Plus |
3R | 32079331 | 3R | 16810162..16810317 | 1162..1007 | 390 | 83.3 | Minus |
Blast to na_te.dros performed 2014-11-28 12:53:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
R1A1-element | 5356 | R1A1-element DMRER1DM 5356bp Derived from X51968 (g8429) (Rel. 23, Last updated, Version 1). | 613..725 | 231..126 | 126 | 60.2 | Minus |
BO31914.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-10-18 15:59:05 Download gff for
BO31914.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Scr-RB | 472..1722 | 17..1269 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:57:11 Download gff for
BO31914.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Scr-RA | 625..1875 | 17..1269 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:16:16 Download gff for
BO31914.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Scr-RA | 625..1875 | 17..1269 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:16:16 Download gff for
BO31914.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 6825383..6825689 | 963..1269 | 99 | <- | Minus |
3R | 6841235..6842180 | 17..962 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:57:11 Download gff for
BO31914.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 2651105..2651411 | 963..1269 | 99 | <- | Minus |
arm_3R | 2666957..2667902 | 17..962 | 100 | | Minus |
BO31914.pep Sequence
Translation from 16 to 1285
> BO31914.pep
MDPDCFAMSSYQFVNSLASCYPQQMNPQQNHPGAGNSSAGGSGGGAGGSG
GVVPSGGTNGGQGSAGAATPGANDYFPAAAAYTPNLYPNTPQAHYANQAA
YGGQGNPDMVDYTQLQPQRLLLQQQQQQQQQQHAHAAAAVAAQQQQQLAQ
QQHPQQQQQQQQANISCKYANDPVTPGGSGGGGVSGSNNNNNSANSNNNN
SQSLASPQDLSTRDISPKLSPSSVVESVARSLNKGVLGGSLAAAAAAAGL
NNNHSGSGVSGGPGNVNVPMHSPGGGDSDSESDSGNEAGSSQNSGNGKKN
PPQIYPWMKRVHLGTSTVNANGETKRQRTSYTRYQTLELEKEFHFNRYLT
RRRRIEIAHALCLTERQIKIWFQNRRMKWKKEHKMASMNIVPYHMGPYGH
PYHQFDIHPSQFAHLSAASFLDH
BO31914.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:58:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Scr-PB | 417 | CG1030-PB | 1..417 | 1..417 | 2226 | 100 | Plus |
Scr-PA | 417 | CG1030-PA | 1..417 | 1..417 | 2226 | 100 | Plus |
Antp-PJ | 378 | CG1028-PJ | 109..357 | 117..384 | 405 | 41.2 | Plus |
Antp-PI | 378 | CG1028-PI | 109..357 | 117..384 | 405 | 41.2 | Plus |
Antp-PL | 378 | CG1028-PL | 109..357 | 117..384 | 405 | 41.2 | Plus |