Clone BO31928 Report

Search the DGRC for BO31928

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:319
Well:28
Vector:pDNR-Dual
Associated Gene/TranscriptDfd-RA
Protein status:BO31928.pep: Imported from assembly
Sequenced Size:1792

Clone Sequence Records

BO31928.complete Sequence

1792 bp assembled on 2012-05-15

GenBank Submission: KX795700

> BO31928.complete
GAAGTTATCAGTCGACATGAGCTCTTTTCTCATGGGTTATCCGCATGCAC
CACATCATGTCCAGAGTCCCATGTCCATGGGCAATGGCTTGGACCCAAAG
TTTCCGCCGTTGGCCGATGACTATCATCACTACAATGGACACTATTCGAT
GACCGCATCTACGGGTCATATGAGTGGTGCCGTCGGCGGTGGTGCAGGTG
TTGGGTCTGTCGGAGGTGGTGGAGCAGGTGGGATGACTGGTCATCCGCAT
TCCATGCACCCGGCGGACATGGTCAGTGACTATATGGCGCATCACCACAA
TCCGCACAGCCACTCCCATTCGCACACCCACTCACTACCGCACCACCATA
GCAACAGTGCAATATCTGGACACCACCAGGCATCCGCCGGCGGTTACAGT
TCCAATTATGCCAATGCCACTCCGCCCTCACATCCGCACTCGCATCCACA
CGCCCATCCGCACCAGAGCCTCGGCTATTACGTCCACCACGCCCCCGAAT
TCATATCCGCAGGAGCGGTGCACTCCGATCCCACGAACGGATACGGACCG
GCGGCAAACGTTCCAAATACGAGCAATGGCGGTGGTGGCGGAGGAAGTGG
CGCAGTGCTCGGAGGTGGCGCAGTGGGTGGATCGGCAAATGGATATTACG
GCGGGTACGGTGGGGGTTATGGGACGGCGAACGGAAGTGTGGGCAGCACC
CACTCCCAAGGACACTCGCCGCACTCCCAGATGATGGATCTGCCCCTTCA
GTGCAGCTCCACGGAACCACCGACGAACACGGCGCTGGGACTGCAGGAAT
TAGGCCTAAAACTAGAAAAACGCATAGAAGAAGCTGTACCTGCCGGACAA
CAACTGCAAGAGCTAGGGATGCGATTGCGGTGTGATGATATGGGATCCGA
AAACGACGATATGTCAGAGGAGGATCGGCTCATGCTGGATCGATCTCCAG
ACGAGCTGGGCTCCAACGACAACGACGACGACCTCGGGGACTCAGACAGC
GATGAGGATCTGATGGCGGAGACGACCGATGGCGAACGGATCATCTACCC
CTGGATGAAGAAGATCCATGTGGCGGGAGTTGCGAACGGGTCTTACCAGC
CGGGAATGGAGCCAAAACGCCAACGCACCGCCTACACACGCCATCAGATC
CTGGAACTGGAAAAGGAGTTCCACTACAACCGCTACCTGACGCGTCGGCG
GCGCATCGAGATTGCCCATACGTTAGTTCTCTCGGAGCGGCAGATCAAGA
TCTGGTTCCAGAACAGGCGCATGAAGTGGAAGAAGGACAACAAGCTGCCC
AACACCAAGAACGTGCGCAAGAAGACGGTGGACGCCAACGGCAACCCAAC
ACCGGTAGCGAAGAAACCCACCAAGCGGGCCGCCTCCAAAAAGCAGCAGC
AAGCGCAGCAGCAGCAGCAGTCGCAGCAGCAGCAGACGCAGCAGACTCCG
GTGATGAATGAGTGCATTCGTTCCGACAGTTTGGAGAGTATCGGTGACGT
CAGCTCGTCCCTGGGCAATCCGCCCTATATACCGGCGGCACCTGAGACGA
CCAGCTCTTATCCGGGATCTCAGCAGCACCTCAGCAATAACAACAACAAT
GGCAGCGGCAATAACAATAATAACAACAACAACAACAACAGCAACCTCAA
TAACAATAACAATAACAATCAAATGGGTCACACGAATCTGCATGGGCACC
TTCAACAGCAACAATCCGATCTCATGACCAATCTTCAGCTACACATCAAG
CAGGACTACGATCTGACGGCCCTGGCAAGCTTTCTAGACCAT

BO31928.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:19:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dfd-RA 1761 CG2189-PA 1..1758 17..1774 8790 100 Plus
Scr-RB 1254 CG1030-PB 973..1152 1115..1294 450 83.3 Plus
Scr-RA 1254 CG1030-PA 973..1152 1115..1294 450 83.3 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:19:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dfd-RA 2739 CG2189-RA 489..2247 16..1774 8795 100 Plus
Scr-RB 3987 CG1030-RB 1444..1623 1115..1294 450 83.3 Plus
Scr-RA 4140 CG1030-RA 1597..1776 1115..1294 450 83.3 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:19:49
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 6792324..6793112 16..804 3945 100 Plus
3R 32079331 3R 6800978..6801358 1082..1462 1905 100 Plus
3R 32079331 3R 6801623..6801936 1461..1774 1570 100 Plus
3R 32079331 3R 6793663..6793840 905..1082 890 100 Plus
3R 32079331 3R 6793495..6793598 802..905 520 100 Plus
3R 32079331 3R 6825484..6825663 1294..1115 450 83.3 Minus
3R 32079331 3R 6898354..6898485 1294..1163 300 81.8 Minus
3R 32079331 3R 16658884..16659038 1287..1133 250 77.4 Minus
Blast to na_te.dros performed on 2014-11-28 11:19:50 has no hits.

BO31928.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-15 10:36:37 Download gff for BO31928.complete
Subject Subject Range Query Range Percent Splice Strand
Dfd-RA 490..2247 17..1776 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:19:57 Download gff for BO31928.complete
Subject Subject Range Query Range Percent Splice Strand
Dfd-RA 490..2247 17..1776 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:40:36 Download gff for BO31928.complete
Subject Subject Range Query Range Percent Splice Strand
Dfd-RA 490..2247 17..1776 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:40:36 Download gff for BO31928.complete
Subject Subject Range Query Range Percent Splice Strand
3R 6792325..6793111 17..803 100 -> Plus
3R 6793497..6793597 804..904 100 -> Plus
3R 6793663..6793840 905..1082 100 -> Plus
3R 6800979..6801358 1083..1462 100 -> Plus
3R 6801625..6801936 1463..1776 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:19:57 Download gff for BO31928.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 2626701..2627080 1083..1462 100 -> Plus
arm_3R 2618047..2618833 17..803 100 -> Plus
arm_3R 2619219..2619319 804..904 100 -> Plus
arm_3R 2619385..2619562 905..1082 100 -> Plus
arm_3R 2627347..2627658 1463..1776 99   Plus

BO31928.pep Sequence

Translation from 16 to 1792

> BO31928.pep
MSSFLMGYPHAPHHVQSPMSMGNGLDPKFPPLADDYHHYNGHYSMTASTG
HMSGAVGGGAGVGSVGGGGAGGMTGHPHSMHPADMVSDYMAHHHNPHSHS
HSHTHSLPHHHSNSAISGHHQASAGGYSSNYANATPPSHPHSHPHAHPHQ
SLGYYVHHAPEFISAGAVHSDPTNGYGPAANVPNTSNGGGGGGSGAVLGG
GAVGGSANGYYGGYGGGYGTANGSVGSTHSQGHSPHSQMMDLPLQCSSTE
PPTNTALGLQELGLKLEKRIEEAVPAGQQLQELGMRLRCDDMGSENDDMS
EEDRLMLDRSPDELGSNDNDDDLGDSDSDEDLMAETTDGERIIYPWMKKI
HVAGVANGSYQPGMEPKRQRTAYTRHQILELEKEFHYNRYLTRRRRIEIA
HTLVLSERQIKIWFQNRRMKWKKDNKLPNTKNVRKKTVDANGNPTPVAKK
PTKRAASKKQQQAQQQQQSQQQQTQQTPVMNECIRSDSLESIGDVSSSLG
NPPYIPAAPETTSSYPGSQQHLSNNNNNGSGNNNNNNNNNNSNLNNNNNN
NQMGHTNLHGHLQQQQSDLMTNLQLHIKQDYDLTALASFLDH

BO31928.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:34:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dfd-PA 586 CG2189-PA 1..586 1..586 3194 100 Plus
Scr-PB 417 CG1030-PB 15..385 23..427 342 29.8 Plus
Scr-PA 417 CG1030-PA 15..385 23..427 342 29.8 Plus
abd-A-PD 330 CG10325-PD 109..247 344..476 302 51.4 Plus
abd-A-PC 330 CG10325-PC 109..247 344..476 302 51.4 Plus