BO32045.complete Sequence
3784 bp assembled on 2012-05-15
GenBank Submission: KX799990
> BO32045.complete
GAAGTTATCAGTCGACATGGATCGGGATTCGAGCATGCAGGCGAAAAACC
TAGATGCTCAATGCAACCCAGACCTCAAAATGGCGTCTGCAAATTCAGAA
ACTTTAGCGTCGGCAACGCACGAGCTGAAAATTATGGACGTAGAGGGTGG
TGCTCTGGTGGATCCGGATCACATCGAGGAAGTGGAGACCTCCATGGTCA
TCGTGGTGGATGATGACGATGGGGATGTGGCCATGGTGGTGGAGGAGGAC
AAGCACCCGATGCGGGATGACCCGTGTATTGAGGACATCATGGATGACGA
ACATGCTCCATTGGTGGCCGAGCTACAGTCCGCTCTAAATAACCCAGACG
ACAAACAGGCCAGCGAGGATCCCCTCCTGGAAGACCAGGAACGTGAACCC
GATGCCATGTCCACTAAAACTGAACCCTCCAGCGATGCGGAGAGCTCCCA
TTCGTACCACGATCCCATGGGCCTGCTGGAGAGGATTGAAATCCATGATC
CGGGAGACAGCCAGGATGACGACGACGAGGATGACGAAAGCAGCAATGGC
GGTGGCGTTGACGGAGGCATGCGCCGCAAGATGCCCCGCGCACAGCGCTG
GCTCCTCTGGATGAAGCGTTGGCCCTGGATCCTACACGAGGACTCCGATG
GCACCTTAGCGTTCTGCCTTTACTGCAACATATCCATTAACGTGAACAAC
CGCTCTAGACACATCCAACAGCACAACGTGTCGCTCTCCCACCAGGAACG
CGAGTGCAACTATCTGGCATTCAAGAAAAGTGAGGAGGAAACTCGAGGAG
CAATCAGCGACAACGAAATCAAGCACGAATTCGGCACCAAGAGCTATGTG
GCCGCCATGAAGCAAAAACGAATCTCCGAGACCGAGGCATTTAACAACTT
CAACTGGCTGCGTTGGCTCCGTTGGCATCCTTGGCTTGAACGTTCCATGC
CCACAGGGACCATCGGGACATGTCGCATCTGCAGCGTGCGAATGAACGTG
GAGTTTGTCTATTTGCGCAAGCGCCACGAAACCACCAAAGGTCACATGGA
GGCACTGCGCAACCTAGATTCCGATAAGCGGAGTCGGAAGCGAAAGAGGA
GCAAGAGCAACAGCGTGACCAATAGCGGCGGGGATGAGGCCGAGCGAGAG
AAGGAATCTGAACCAGAAGTTGGGCCGGAGGATGCTCAGGACACCCCTGT
GGTTATGATGAACGGCGATGTGGACTCAGGCGACGACCCTGGCAAGTGGT
GTGCACTGATTCCGGACACCAATCCACAGCAATGCCGATGTACGCTCTGC
AACTGCACAATGGCGATTACCAGCTTCCTACGGCACTGTAAAACCAGAGC
TCATTGTCACATGCTATCGACACCCGCTGAAAAGGGCTCTTCAGATATTC
GCGGCATTTGGGCCGTGTTCGCCGACATGCATCCTTGGTTGATTGCTGAT
CCCGAAGACCCCAGCATTGGGTACTGCAGCGTCTGTCGCAAGCGATTCAT
GTATGGAAACTCAGAGATCAAGCGCAAGAATCACGAAAAATCCGAGAAGC
ATACCTTGGCTTTGGCCAGCGCCAAGGCAGGCATCGAAGTTGGTTCGGCT
GACGGCAGAGGCGGCGATAACATGGATGAAGAGGAAGCGGCGGCAAGTGA
TCAAGCCCAGTCATCGCAGACCGATGACAGCGAAGATAATGACGATGACA
ATTGGTCCGAGATCCAAAAACTCGGAAAAGGTTTTGCTCATAAGTCCTCT
AGCGAGCCAAGAAAGGCCACGGTTCGCGCTGGGGTACGTTTTTACCCGTG
GCTTTGCTACTCCAAGGACCGAAAGACTCAGATTTGCAAATTCTGCCGCG
TGCGCTTTCACAACGAAGCGGCAAAGGCGCGGCATGAGTTGAGTGCCCGG
CATGTAAAGCTGGTAAAGCAGTTCAAAATGCGGCAAGCGAAACTGCACCA
GGGCACAAACACGCAAACTAAACATAATGCGCAGGATGATGAAGAATCAC
AGGAACAGGACGAGGAATATGGAGAAGAAGAGGAGGACGCAGAAGAAGAT
TCCCAAAGCAACTTCGACTTGGGCACCGTGCAGGCAAGAAAGACTGCTCG
AGCGGACAATAAGCTTTTTGTCAAGCCCATTCCGGCAACCATGAAGGGCA
AGGTTATGGTGTGGAAGGGCCGCTTCCCGTGGCTCTCCTACAAAAAGAAC
GAGCAGCGTGGAAACTATGCTTGGTGCAAGCTGTGCGAAGTGTCTCTCTA
CCTGCCCTCATCCAAGTGGGCCTCCAAGCACCAGAGGACTTCCCGACACA
TACGCCTCCGCATTGATCGAAAGCGCAATGGTGGCAACCCTTTGAAAACA
TCGAACAAAAACTCAGGTGAAATATCCACTGTTGTGGCCACAGCTTCGGC
TTTGGCCAGCGCCGAGGCTAGACAGAAAGCGGCTATGGCAGAGCTGCAAG
CGAAGTACGACTGGCTGGATCCTGATGCCAATGACGAGAATCACTGTCAC
TGCCGTGTTTGTGATAGCCGGCTGCCGATCAAGGTATTTTACCTGCGGCA
ACACGACGCTTCGCGTAAGCACGTCGAAAATAAGGAGCGGCAAAGGGCCA
ATGCCGCCGCTGCCGCCAATGCACCATCAGTTAGTCCCACTTCCACCGTT
GATGCGGAAAGGCAGGAGTCTGGAATGGACAAGGAGAGCGAAAACGATAT
GAGCGTTCGATCCGATGGCAGCACAGCGGAACCGCTGGCGAAGCGGTCCC
GACGCTCAATGGAGGTTCGTCGCATAATACGCGCCCTTCGCGACTCAATG
GGCAAGCGACAGGAAGAACGCTCCCAAATGGACATGGCCAGGGACATGAT
ATGCTCGTCGTTTGATATTGTTACACGCTTGCGAACTTTGGAACGGGAGT
CGGTCGCACATAACGAGTCTATGGCCCAGGCGCCGCCATCGGTGACAGTG
TCACCGATTAAGCCACCGGAGCCACGACATGTAATGGATCTCTTCTTTGA
CAGCATTTCGCCGACCATGAAGTCCCTGCCGCCGGATTTAGCCGCAGAGG
GCAAGTCGAAAATCATGCAGCTCGTTTGTAGCTTGGAGCTTCGAGCCATG
CAGAGAAATGCGACAACTCCAACCCCAGCTACAGTTTCTGCTTCCTCGAA
ATGGCCTTCTTCAACTACGGTGACCCCAGTTAAAACTCCTCCTGCTCCTA
TTTCAGCTCCCCTTGCTTCTGTCGATGCAGATTTGCATTCCTCGGTTGTC
ACAACACCGCATGAATACAATAATGGGCAGAACAATAATAACGACAAGGA
AACCGTACCGAAAGAGCCAGTTACCGGGGCTTCCTCTGCCCAAGTGACCA
TCAATGGGAGCGCCAAAGACCTGCCAGAGAATATACGCCGTATCTTAACT
TCCAACCAAACGCAAGTGACCAACCGCCTCGAGACGGATTCCGTGCGTTG
TGTACCTCTTGACAAACTAACAACACAGAGTCGGACCAACGTGAACGGAC
GACTCAGTCAAGGTGGCACTTCGGAAGCACCATCCACCCCACAGGCGGAC
CTTAGCAATGGTAACACGTTGGCCATGATCAGGCAGATACGGGTTAACAA
TAACAACAGTTCCAAGATCACCGTTACTAATACGCCTCAGATGCAACAGC
CGCAGCAGGCACAGGCAAGCATAACGTCCTCGACTCCAATAATGCGTGGT
GGTCCCAGCAGCAACGGTTGTCAAATCACAACATTTCGGACAATGGTGAA
CCATAACCGCAGGCCAGCAAGCTTTCTAGACCAT
BO32045.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:20:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Su(var)3-7-RA | 3753 | CG8599-PA | 1..3750 | 17..3766 | 18750 | 100 | Plus |
| Su(var)3-7-RB | 3747 | CG8599-PB | 1..3744 | 17..3766 | 18625 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:20:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Su(var)3-7-RA | 5051 | CG8599-RA | 153..3902 | 17..3766 | 18750 | 100 | Plus |
| Su(var)3-7-RB | 4217 | CG8599-RB | 153..3896 | 17..3766 | 18625 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:20:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 13267832..13268889 | 2709..3766 | 5290 | 100 | Plus |
| 3R | 32079331 | 3R | 13266787..13267765 | 1731..2709 | 4895 | 100 | Plus |
| 3R | 32079331 | 3R | 13264516..13265300 | 17..801 | 3925 | 100 | Plus |
| 3R | 32079331 | 3R | 13265735..13266319 | 802..1386 | 2925 | 100 | Plus |
| 3R | 32079331 | 3R | 13266387..13266732 | 1386..1731 | 1730 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 11:20:08 has no hits.
BO32045.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-05-15 10:36:40 Download gff for
BO32045.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Su(var)3-7-RA | 162..3911 | 17..3768 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:20:04 Download gff for
BO32045.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Su(var)3-7-RA | 153..3902 | 17..3768 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:40:44 Download gff for
BO32045.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Su(var)3-7-RA | 153..3902 | 17..3768 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:40:44 Download gff for
BO32045.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 13264516..13265300 | 17..801 | 100 | -> | Plus |
| 3R | 13265735..13266319 | 802..1386 | 100 | -> | Plus |
| 3R | 13266388..13266732 | 1387..1731 | 100 | -> | Plus |
| 3R | 13266788..13267765 | 1732..2709 | 100 | -> | Plus |
| 3R | 13267833..13268889 | 2710..3768 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:20:04 Download gff for
BO32045.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 9090238..9091022 | 17..801 | 100 | -> | Plus |
| arm_3R | 9091457..9092041 | 802..1386 | 100 | -> | Plus |
| arm_3R | 9092110..9092454 | 1387..1731 | 100 | -> | Plus |
| arm_3R | 9092510..9093487 | 1732..2709 | 100 | -> | Plus |
| arm_3R | 9093555..9094611 | 2710..3768 | 99 | | Plus |
BO32045.pep Sequence
Translation from 16 to 3784
> BO32045.pep
MDRDSSMQAKNLDAQCNPDLKMASANSETLASATHELKIMDVEGGALVDP
DHIEEVETSMVIVVDDDDGDVAMVVEEDKHPMRDDPCIEDIMDDEHAPLV
AELQSALNNPDDKQASEDPLLEDQEREPDAMSTKTEPSSDAESSHSYHDP
MGLLERIEIHDPGDSQDDDDEDDESSNGGGVDGGMRRKMPRAQRWLLWMK
RWPWILHEDSDGTLAFCLYCNISINVNNRSRHIQQHNVSLSHQERECNYL
AFKKSEEETRGAISDNEIKHEFGTKSYVAAMKQKRISETEAFNNFNWLRW
LRWHPWLERSMPTGTIGTCRICSVRMNVEFVYLRKRHETTKGHMEALRNL
DSDKRSRKRKRSKSNSVTNSGGDEAEREKESEPEVGPEDAQDTPVVMMNG
DVDSGDDPGKWCALIPDTNPQQCRCTLCNCTMAITSFLRHCKTRAHCHML
STPAEKGSSDIRGIWAVFADMHPWLIADPEDPSIGYCSVCRKRFMYGNSE
IKRKNHEKSEKHTLALASAKAGIEVGSADGRGGDNMDEEEAAASDQAQSS
QTDDSEDNDDDNWSEIQKLGKGFAHKSSSEPRKATVRAGVRFYPWLCYSK
DRKTQICKFCRVRFHNEAAKARHELSARHVKLVKQFKMRQAKLHQGTNTQ
TKHNAQDDEESQEQDEEYGEEEEDAEEDSQSNFDLGTVQARKTARADNKL
FVKPIPATMKGKVMVWKGRFPWLSYKKNEQRGNYAWCKLCEVSLYLPSSK
WASKHQRTSRHIRLRIDRKRNGGNPLKTSNKNSGEISTVVATASALASAE
ARQKAAMAELQAKYDWLDPDANDENHCHCRVCDSRLPIKVFYLRQHDASR
KHVENKERQRANAAAAANAPSVSPTSTVDAERQESGMDKESENDMSVRSD
GSTAEPLAKRSRRSMEVRRIIRALRDSMGKRQEERSQMDMARDMICSSFD
IVTRLRTLERESVAHNESMAQAPPSVTVSPIKPPEPRHVMDLFFDSISPT
MKSLPPDLAAEGKSKIMQLVCSLELRAMQRNATTPTPATVSASSKWPSST
TVTPVKTPPAPISAPLASVDADLHSSVVTTPHEYNNGQNNNNDKETVPKE
PVTGASSAQVTINGSAKDLPENIRRILTSNQTQVTNRLETDSVRCVPLDK
LTTQSRTNVNGRLSQGGTSEAPSTPQADLSNGNTLAMIRQIRVNNNNSSK
ITVTNTPQMQQPQQAQASITSSTPIMRGGPSSNGCQITTFRTMVNHNRRP
ASFLDH
BO32045.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:35:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Su(var)3-7-PA | 1250 | CG8599-PA | 1..1250 | 1..1250 | 6590 | 100 | Plus |
| Su(var)3-7-PB | 1248 | CG8599-PB | 1..1248 | 1..1250 | 6569 | 99.8 | Plus |
