BO32101.complete Sequence
877 bp assembled on 2012-07-09
GenBank Submission: KX797036
> BO32101.complete
GAAGTTATCAGTCGACATGTTCTACCTAATCGGCCTCGGCCTTGGCGACC
TGAAGGACATCACGGTCAAGGGTCTGGAGATAGTGAAGCAATGCAGTCGC
GTCTATCTGGAGATGTACACCTCGATTCTGGGCTGCAGCCTTGAGGATAT
GCAAGAGTTCTATGGACGACCACTGCTGCTAGCCGACCGCGATCTGGTGG
AGCAGGGTGCGGATGAGATCCTGGCGGGTGCGGGCGAATCCGATGTTGCG
CTGCTCGTGGTGGGCGACCCCTTTGGCGCCACCACCCACACAGACTTCAT
ACTGCGCGCCAAGGAGAAGAACATCCCCTACAAGGTCATCCACAATGCAT
CGATCATGAACGCCGTCGGCTGCTGCGGCCTGCAATTGTACAAATTCGGC
GAGACCGTTTCGATTCCGTACTGGGACGAGACATGGAAGCCGGACAGCTT
CTACGACAAGATCAAGCTGAATCGCCTGCACAACATGCACACGCTGTGCC
TGCTGGACATCAAGGTGAAGGAGCCCACGCCGGAGTCCTTGATGCGCAAA
CGCAAGGAGTACATGCCACCGCGTTTCATGACCGTGGCGGAGGCGGCTCA
TCAGTTGCTGTCCATTGTGGAGAAGAAGGACTCGCTGGAGAAGAACACAG
TGCTCAACGAGCAGTCACTGTGCGTTGGACTGGCCCGTGTTGGCCAGGAG
TCGCAGCAGATTGCCGTTGGCACGCTGCTTGAGATGCGCTCGACCGATTT
GGGCGGACCGCTGCACTCGCTCATCATTCCCGCCAAGGAGATGCATCCGC
TGGAGGTGGAGTTCTTGCAGCAGTATGCCCCCAGCATCAAGCTGGACGAC
TACAACCACGCAAGCTTTCTAGACCAT
BO32101.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:39:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dph5-RA | 846 | CG31289-PA | 1..843 | 17..859 | 4215 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:39:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dph5-RA | 1128 | CG31289-RA | 105..948 | 16..859 | 4220 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:39:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 22582208..22582916 | 859..151 | 3545 | 100 | Minus |
3R | 32079331 | 3R | 22582986..22583121 | 151..16 | 680 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 11:39:31 has no hits.
BO32101.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-07-09 16:49:16 Download gff for
BO32101.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Dph5-RA | 114..951 | 22..861 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:29:20 Download gff for
BO32101.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Dph5-RA | 111..948 | 22..861 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:48:39 Download gff for
BO32101.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Dph5-RA | 111..948 | 22..861 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:48:39 Download gff for
BO32101.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 22582206..22582915 | 152..861 | 99 | <- | Minus |
3R | 22582986..22583115 | 22..151 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:29:20 Download gff for
BO32101.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 18407928..18408637 | 152..861 | 99 | <- | Minus |
arm_3R | 18408708..18408837 | 22..151 | 100 | | Minus |
BO32101.pep Sequence
Translation from 16 to 877
> BO32101.pep
MFYLIGLGLGDLKDITVKGLEIVKQCSRVYLEMYTSILGCSLEDMQEFYG
RPLLLADRDLVEQGADEILAGAGESDVALLVVGDPFGATTHTDFILRAKE
KNIPYKVIHNASIMNAVGCCGLQLYKFGETVSIPYWDETWKPDSFYDKIK
LNRLHNMHTLCLLDIKVKEPTPESLMRKRKEYMPPRFMTVAEAAHQLLSI
VEKKDSLEKNTVLNEQSLCVGLARVGQESQQIAVGTLLEMRSTDLGGPLH
SLIIPAKEMHPLEVEFLQQYAPSIKLDDYNHASFLDH
BO32101.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:07:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dph5-PA | 281 | CG31289-PA | 1..281 | 1..281 | 1461 | 100 | Plus |