Clone BO32101 Report

Search the DGRC for BO32101

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:321
Well:1
Vector:pDNR-Dual
Associated Gene/TranscriptDph5-RA
Protein status:BO32101.pep: Imported from assembly
Sequenced Size:877

Clone Sequence Records

BO32101.complete Sequence

877 bp assembled on 2012-07-09

GenBank Submission: KX797036

> BO32101.complete
GAAGTTATCAGTCGACATGTTCTACCTAATCGGCCTCGGCCTTGGCGACC
TGAAGGACATCACGGTCAAGGGTCTGGAGATAGTGAAGCAATGCAGTCGC
GTCTATCTGGAGATGTACACCTCGATTCTGGGCTGCAGCCTTGAGGATAT
GCAAGAGTTCTATGGACGACCACTGCTGCTAGCCGACCGCGATCTGGTGG
AGCAGGGTGCGGATGAGATCCTGGCGGGTGCGGGCGAATCCGATGTTGCG
CTGCTCGTGGTGGGCGACCCCTTTGGCGCCACCACCCACACAGACTTCAT
ACTGCGCGCCAAGGAGAAGAACATCCCCTACAAGGTCATCCACAATGCAT
CGATCATGAACGCCGTCGGCTGCTGCGGCCTGCAATTGTACAAATTCGGC
GAGACCGTTTCGATTCCGTACTGGGACGAGACATGGAAGCCGGACAGCTT
CTACGACAAGATCAAGCTGAATCGCCTGCACAACATGCACACGCTGTGCC
TGCTGGACATCAAGGTGAAGGAGCCCACGCCGGAGTCCTTGATGCGCAAA
CGCAAGGAGTACATGCCACCGCGTTTCATGACCGTGGCGGAGGCGGCTCA
TCAGTTGCTGTCCATTGTGGAGAAGAAGGACTCGCTGGAGAAGAACACAG
TGCTCAACGAGCAGTCACTGTGCGTTGGACTGGCCCGTGTTGGCCAGGAG
TCGCAGCAGATTGCCGTTGGCACGCTGCTTGAGATGCGCTCGACCGATTT
GGGCGGACCGCTGCACTCGCTCATCATTCCCGCCAAGGAGATGCATCCGC
TGGAGGTGGAGTTCTTGCAGCAGTATGCCCCCAGCATCAAGCTGGACGAC
TACAACCACGCAAGCTTTCTAGACCAT

BO32101.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:39:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dph5-RA 846 CG31289-PA 1..843 17..859 4215 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:39:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dph5-RA 1128 CG31289-RA 105..948 16..859 4220 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:39:30
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 22582208..22582916 859..151 3545 100 Minus
3R 32079331 3R 22582986..22583121 151..16 680 100 Minus
Blast to na_te.dros performed on 2014-11-28 11:39:31 has no hits.

BO32101.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-07-09 16:49:16 Download gff for BO32101.complete
Subject Subject Range Query Range Percent Splice Strand
Dph5-RA 114..951 22..861 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:29:20 Download gff for BO32101.complete
Subject Subject Range Query Range Percent Splice Strand
Dph5-RA 111..948 22..861 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:48:39 Download gff for BO32101.complete
Subject Subject Range Query Range Percent Splice Strand
Dph5-RA 111..948 22..861 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:48:39 Download gff for BO32101.complete
Subject Subject Range Query Range Percent Splice Strand
3R 22582206..22582915 152..861 99 <- Minus
3R 22582986..22583115 22..151 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:29:20 Download gff for BO32101.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 18407928..18408637 152..861 99 <- Minus
arm_3R 18408708..18408837 22..151 100   Minus

BO32101.pep Sequence

Translation from 16 to 877

> BO32101.pep
MFYLIGLGLGDLKDITVKGLEIVKQCSRVYLEMYTSILGCSLEDMQEFYG
RPLLLADRDLVEQGADEILAGAGESDVALLVVGDPFGATTHTDFILRAKE
KNIPYKVIHNASIMNAVGCCGLQLYKFGETVSIPYWDETWKPDSFYDKIK
LNRLHNMHTLCLLDIKVKEPTPESLMRKRKEYMPPRFMTVAEAAHQLLSI
VEKKDSLEKNTVLNEQSLCVGLARVGQESQQIAVGTLLEMRSTDLGGPLH
SLIIPAKEMHPLEVEFLQQYAPSIKLDDYNHASFLDH

BO32101.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:07:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dph5-PA 281 CG31289-PA 1..281 1..281 1461 100 Plus