BO32104.complete Sequence
775 bp assembled on 2012-07-09
GenBank Submission: KX798721
> BO32104.complete
GAAGTTATCAGTCGACATGCGTTTAACGCAATATTTGGCCAGCAAGTTGA
AGAACTTTTCCAATCTGCCCAAGGAATACATCGAGCGCAGCAAAAAACAG
GTGTACTGGCAAACTCCGAAGGAGATTAATTACCTACCGCGTACCGTGGA
GCGAAAGAGATTCCGCTACACCACAAATCGTTCATGGACGGGTCAGTTCC
GCCAGCAAAATATGCCCGGAACCGTGCGTCGCAAGGTGCTAGTGGAACCA
ATTGAGGACTGGAGCTTTTTCCGCGGCGATCGTATCGAAGTCCTTGTGGG
TAAAGACAAAGGAAAGCAGGGAATTGTCACCCAGGTTATACCCGAGCGCA
ATTGGGTAATTGTAGAGGGCCTGAACTGGCACTATCGCAAGGTTGGCGGT
GAGAAGGAGTTTCCCGGTATCATTATCAAGTCCGAGGCACCTTTGCACGT
CACCAAGGACATTCGTCTGGTTGACCCATCGGATCTTCAGGGCACCGACT
TTGAGTGGCGTTTCACGGAGGAGGGCGAGAAAGTGCGGGTGTCCTTGCGA
TCTGGCCGAATCATACCCATCCCGGAGACGAACAACCAGACGCACGATTA
TAAAACACCAAACGCCTATATCGAAAGGGAGAAGGATACGCCAGGCGCTG
TTGTGGGCGAGATCACCTTTCAGCCCAAGTTGTCCACATTCGAGATGGAC
ATTATGGAGGAAATGGGCATCAAAGAGGAACGCACGCCAGTCAAGAGCTA
TTGGTACGCAAGCTTTCTAGACCAT
BO32104.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:39:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
mRpL24-RA | 744 | CG8849-PA | 1..741 | 17..757 | 3705 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:39:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
mRpL24-RA | 875 | CG8849-RA | 87..827 | 17..757 | 3705 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:39:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 4944474..4944865 | 645..254 | 1960 | 100 | Minus |
2L | 23513712 | 2L | 4944927..4945084 | 254..97 | 790 | 100 | Minus |
2L | 23513712 | 2L | 4944304..4944419 | 757..642 | 580 | 100 | Minus |
2L | 23513712 | 2L | 4945190..4945275 | 102..17 | 430 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 11:39:40 has no hits.
BO32104.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-07-09 16:49:17 Download gff for
BO32104.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
mRpL24-RA | 69..809 | 17..759 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:29:25 Download gff for
BO32104.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
mRpL24-RA | 87..827 | 17..759 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:48:43 Download gff for
BO32104.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
mRpL24-RA | 87..827 | 17..759 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:48:43 Download gff for
BO32104.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 4944302..4944416 | 645..759 | 98 | <- | Minus |
2L | 4944475..4944864 | 255..644 | 100 | <- | Minus |
2L | 4944927..4945080 | 101..254 | 100 | <- | Minus |
2L | 4945192..4945275 | 17..100 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:29:25 Download gff for
BO32104.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 4944302..4944416 | 645..759 | 98 | <- | Minus |
arm_2L | 4944475..4944864 | 255..644 | 100 | <- | Minus |
arm_2L | 4944927..4945080 | 101..254 | 100 | <- | Minus |
arm_2L | 4945192..4945275 | 17..100 | 100 | | Minus |
BO32104.pep Sequence
Translation from 16 to 775
> BO32104.pep
MRLTQYLASKLKNFSNLPKEYIERSKKQVYWQTPKEINYLPRTVERKRFR
YTTNRSWTGQFRQQNMPGTVRRKVLVEPIEDWSFFRGDRIEVLVGKDKGK
QGIVTQVIPERNWVIVEGLNWHYRKVGGEKEFPGIIIKSEAPLHVTKDIR
LVDPSDLQGTDFEWRFTEEGEKVRVSLRSGRIIPIPETNNQTHDYKTPNA
YIEREKDTPGAVVGEITFQPKLSTFEMDIMEEMGIKEERTPVKSYWYASF
LDH
BO32104.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:07:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
mRpL24-PA | 247 | CG8849-PA | 1..247 | 1..247 | 1317 | 100 | Plus |