BO32106.complete Sequence
403 bp assembled on 2012-07-09
GenBank Submission: KX794740
> BO32106.complete
GAAGTTATCAGTCGACATGGCGAAAATGGCATTCCAGCACCAGGCCGGCA
CGGCGATGGAGTGCTTGAGCATTCCCATCACGCTGCACAAGGAGAAGGAC
TACGACCAGGAGGGGCGCGAGATCCTCAAGTGCGGCTTCAAGATCGGCGG
CGGAATCGACCAGGACTACAAGAAAAGCCCTCAGGGATACACGGATTATG
GCATCTATGTGACCGAGGTGCACGAGGGCAGTCCCGCCGCCCGAGCAGGT
CTGCGGATCCACGACAAGATCCTGCAGTGCAACGGCTACGACTTCACCAT
GGTCACCCACAAAAAGGCCGTGAGCTACATCCGGAAAAACCCGATACTCA
ACATGCTGGTGGCCCGCAAGGGCGTGACCTCCACAGCAAGCTTTCTAGAC
CAT
BO32106.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:39:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG3402-RA | 372 | CG3402-PA | 1..369 | 17..385 | 1845 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:39:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG3402-RA | 1035 | CG3402-RA | 108..486 | 7..385 | 1865 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:39:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 652091..652276 | 385..200 | 930 | 100 | Minus |
3L | 28110227 | 3L | 652443..652572 | 200..71 | 650 | 100 | Minus |
3L | 28110227 | 3L | 652711..652774 | 70..7 | 290 | 96.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 11:39:44 has no hits.
BO32106.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-07-09 16:49:18 Download gff for
BO32106.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3402-RA | 71..439 | 17..387 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:29:26 Download gff for
BO32106.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3402-RA | 118..486 | 17..387 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:48:46 Download gff for
BO32106.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3402-RA | 118..486 | 17..387 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:48:46 Download gff for
BO32106.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 652089..652276 | 200..387 | 98 | <- | Minus |
3L | 652444..652572 | 71..199 | 100 | <- | Minus |
3L | 652711..652764 | 17..70 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:29:26 Download gff for
BO32106.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 652089..652276 | 200..387 | 98 | <- | Minus |
arm_3L | 652444..652572 | 71..199 | 100 | <- | Minus |
arm_3L | 652711..652764 | 17..70 | 100 | | Minus |
BO32106.pep Sequence
Translation from 16 to 403
> BO32106.pep
MAKMAFQHQAGTAMECLSIPITLHKEKDYDQEGREILKCGFKIGGGIDQD
YKKSPQGYTDYGIYVTEVHEGSPAARAGLRIHDKILQCNGYDFTMVTHKK
AVSYIRKNPILNMLVARKGVTSTASFLDH
BO32106.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:07:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG3402-PA | 123 | CG3402-PA | 1..123 | 1..123 | 652 | 100 | Plus |