Clone BO32106 Report

Search the DGRC for BO32106

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:321
Well:6
Vector:pDNR-Dual
Associated Gene/TranscriptCG3402-RA
Protein status:BO32106.pep: Imported from assembly
Sequenced Size:403

Clone Sequence Records

BO32106.complete Sequence

403 bp assembled on 2012-07-09

GenBank Submission: KX794740

> BO32106.complete
GAAGTTATCAGTCGACATGGCGAAAATGGCATTCCAGCACCAGGCCGGCA
CGGCGATGGAGTGCTTGAGCATTCCCATCACGCTGCACAAGGAGAAGGAC
TACGACCAGGAGGGGCGCGAGATCCTCAAGTGCGGCTTCAAGATCGGCGG
CGGAATCGACCAGGACTACAAGAAAAGCCCTCAGGGATACACGGATTATG
GCATCTATGTGACCGAGGTGCACGAGGGCAGTCCCGCCGCCCGAGCAGGT
CTGCGGATCCACGACAAGATCCTGCAGTGCAACGGCTACGACTTCACCAT
GGTCACCCACAAAAAGGCCGTGAGCTACATCCGGAAAAACCCGATACTCA
ACATGCTGGTGGCCCGCAAGGGCGTGACCTCCACAGCAAGCTTTCTAGAC
CAT

BO32106.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:39:46
Subject Length Description Subject Range Query Range Score Percent Strand
CG3402-RA 372 CG3402-PA 1..369 17..385 1845 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:39:47
Subject Length Description Subject Range Query Range Score Percent Strand
CG3402-RA 1035 CG3402-RA 108..486 7..385 1865 99.5 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:39:43
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 652091..652276 385..200 930 100 Minus
3L 28110227 3L 652443..652572 200..71 650 100 Minus
3L 28110227 3L 652711..652774 70..7 290 96.9 Minus
Blast to na_te.dros performed on 2014-11-28 11:39:44 has no hits.

BO32106.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-07-09 16:49:18 Download gff for BO32106.complete
Subject Subject Range Query Range Percent Splice Strand
CG3402-RA 71..439 17..387 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:29:26 Download gff for BO32106.complete
Subject Subject Range Query Range Percent Splice Strand
CG3402-RA 118..486 17..387 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:48:46 Download gff for BO32106.complete
Subject Subject Range Query Range Percent Splice Strand
CG3402-RA 118..486 17..387 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:48:46 Download gff for BO32106.complete
Subject Subject Range Query Range Percent Splice Strand
3L 652089..652276 200..387 98 <- Minus
3L 652444..652572 71..199 100 <- Minus
3L 652711..652764 17..70 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:29:26 Download gff for BO32106.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 652089..652276 200..387 98 <- Minus
arm_3L 652444..652572 71..199 100 <- Minus
arm_3L 652711..652764 17..70 100   Minus

BO32106.pep Sequence

Translation from 16 to 403

> BO32106.pep
MAKMAFQHQAGTAMECLSIPITLHKEKDYDQEGREILKCGFKIGGGIDQD
YKKSPQGYTDYGIYVTEVHEGSPAARAGLRIHDKILQCNGYDFTMVTHKK
AVSYIRKNPILNMLVARKGVTSTASFLDH

BO32106.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:07:16
Subject Length Description Subject Range Query Range Score Percent Strand
CG3402-PA 123 CG3402-PA 1..123 1..123 652 100 Plus