BO32107.complete Sequence
364 bp assembled on 2012-07-09
GenBank Submission: KX798391
> BO32107.complete
GAAGTTATCAGTCGACATGACAGACCCCCGCATCCGGCAACTGGTGATTA
AATCCGGAGTGGTCCGGCGGTTGACCAGGGAGAAGTACTGCTACGCCAAG
GAAGTGCTGACCGAGCAGGCGCGGTTGGAGAAGCTCAGGGGCGACGGAGC
CGACGACCACGTACTGCGCAAGCAGGAGGAGGTCATCCAGGAGTGCATCA
TGATGGTGCCCGACTCCAAGAGAAGACTGCAGAAGGAGTACGAGGTACTG
GAAAAGTACCTCGCCGATGAGCAGGACCTGATCGAGACAGATTCGTATAA
GAAGGCAGCAGAGATCCTCAAAGATGCCAAAGCTGAACTGGAGACCGCAA
GCTTTCTAGACCAT
BO32107.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:39:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1890-RA | 333 | CG1890-PA | 1..330 | 17..346 | 1650 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:39:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1890-RA | 704 | CG1890-RA | 140..469 | 17..346 | 1650 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:39:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 31743629..31743837 | 17..225 | 1045 | 100 | Plus |
| 3R | 32079331 | 3R | 31743891..31744013 | 224..346 | 615 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 11:39:49 has no hits.
BO32107.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-07-09 16:49:19 Download gff for
BO32107.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1890-RA | 124..453 | 17..348 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:29:29 Download gff for
BO32107.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1890-RA | 140..469 | 17..348 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:48:47 Download gff for
BO32107.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1890-RA | 140..469 | 17..348 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:48:47 Download gff for
BO32107.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 31743629..31743837 | 17..225 | 100 | -> | Plus |
| 3R | 31743893..31744013 | 226..348 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:29:29 Download gff for
BO32107.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 27569351..27569559 | 17..225 | 100 | -> | Plus |
| arm_3R | 27569615..27569735 | 226..348 | 98 | | Plus |
BO32107.pep Sequence
Translation from 16 to 364
> BO32107.pep
MTDPRIRQLVIKSGVVRRLTREKYCYAKEVLTEQARLEKLRGDGADDHVL
RKQEEVIQECIMMVPDSKRRLQKEYEVLEKYLADEQDLIETDSYKKAAEI
LKDAKAELETASFLDH
BO32107.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:07:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1890-PA | 110 | CG1890-PA | 1..110 | 1..110 | 550 | 100 | Plus |
| CG9072-PA | 149 | CG9072-PA | 35..146 | 2..109 | 140 | 29.5 | Plus |
