BO32108.complete Sequence
796 bp assembled on 2012-07-09
GenBank Submission: KX797812
> BO32108.complete
GAAGTTATCAGTCGACATGTCCTCCTCGTCGGCCAGAGACCAACCGGGAA
CCTCCCATGACAACTTCGAGGAATTCTACACAGAAGTGAAAGAAATTGAA
AAACGTGATTCAGTTTTAACTCCTTCTCAACAAATTGATCGTTTACTTCG
TCCAGGTTCAACGTACTTCAATCTCAATCCGTTTGAGGTGCTCCAAATCG
AGCCCGAGGTCGAATTGGCGGATATAAAAAAGCGATACCGCACCTTGTCA
ATCCTCGTCCATCCAGACAAGAATCCCGACAACCAGGAGCGCGCTCAAAT
GGCATTCGATATTGTGTCGCGTTCCTGGAAAATCCTCGAAAACGAACTCA
CGCGCAAAAGGTGTCTGGAGGTGTACGAGGAGGCAAAGGGGCGAACGGAT
CAAATGATTGCAGAAAAGCGTAAAAAGCTTAAAAAAGAGGGTCGGCCCAC
TGAGCCAATACCCGAGGACGATCCCACCAAGTACAAGCACGCCATCTACG
TTATGGTCATGAAACTGTTTGCCGACATGGAGCGTCGACGGCAAAAGCTC
GACCAACGCGACCAGGAGGAGCGAAAGCGAAAGCGCGAAACGGAAATCGA
GGAGGAGGAGCGGATAAAGGCGGACCGCGAATGGCAGCAGAACTTCGAAG
AGTCGCGCCAGAGCCGAGTAAACAGCTGGCATGACTTTCAGTCGGGTGCC
GGCAAGTCCAAGAAAGCCAAGAAACAAAAACATATGACCGGCATGATGGT
TCCACCAAAATTTAAGCCCGAGTCGCGAGCAAGCTTTCTAGACCAT
BO32108.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:39:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10375-RA | 765 | CG10375-PA | 1..762 | 17..778 | 3810 | 100 | Plus |
| CG10375-RB | 483 | CG10375-PB | 1..480 | 299..778 | 2400 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:39:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10375-RA | 1008 | CG10375-RA | 90..852 | 16..778 | 3815 | 100 | Plus |
| CG10375-RB | 938 | CG10375-RB | 160..782 | 156..778 | 3115 | 100 | Plus |
| tst-RA | 4332 | CG10210-RA | 3903..4275 | 778..406 | 1865 | 100 | Minus |
| CG10375-RB | 938 | CG10375-RB | 90..161 | 16..87 | 360 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:39:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 23768456..23768828 | 406..778 | 1865 | 100 | Plus |
| 3R | 32079331 | 3R | 23768009..23768329 | 86..406 | 1605 | 100 | Plus |
| 3R | 32079331 | 3R | 23767801..23767872 | 16..87 | 360 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 11:39:54 has no hits.
BO32108.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-07-09 16:49:20 Download gff for
BO32108.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10375-RA | 91..852 | 17..780 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:29:31 Download gff for
BO32108.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10375-RA | 91..852 | 17..780 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:48:49 Download gff for
BO32108.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10375-RA | 91..852 | 17..780 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:48:49 Download gff for
BO32108.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 23767802..23767870 | 17..85 | 100 | -> | Plus |
| 3R | 23768009..23768329 | 86..406 | 100 | -> | Plus |
| 3R | 23768457..23768828 | 407..780 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:29:31 Download gff for
BO32108.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 19594179..19594550 | 407..780 | 99 | | Plus |
| arm_3R | 19593524..19593592 | 17..85 | 100 | -> | Plus |
| arm_3R | 19593731..19594051 | 86..406 | 100 | -> | Plus |
BO32108.pep Sequence
Translation from 16 to 796
> BO32108.pep
MSSSSARDQPGTSHDNFEEFYTEVKEIEKRDSVLTPSQQIDRLLRPGSTY
FNLNPFEVLQIEPEVELADIKKRYRTLSILVHPDKNPDNQERAQMAFDIV
SRSWKILENELTRKRCLEVYEEAKGRTDQMIAEKRKKLKKEGRPTEPIPE
DDPTKYKHAIYVMVMKLFADMERRRQKLDQRDQEERKRKRETEIEEEERI
KADREWQQNFEESRQSRVNSWHDFQSGAGKSKKAKKQKHMTGMMVPPKFK
PESRASFLDH
BO32108.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:07:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10375-PA | 254 | CG10375-PA | 1..254 | 1..254 | 1322 | 100 | Plus |
| CG10375-PB | 160 | CG10375-PB | 1..160 | 95..254 | 838 | 100 | Plus |
