Clone BO32109 Report

Search the DGRC for BO32109

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:321
Well:9
Vector:pDNR-Dual
Associated Gene/TranscriptmRpL44-RA
Protein status:BO32109.pep: Imported from assembly
Sequenced Size:997

Clone Sequence Records

BO32109.complete Sequence

997 bp assembled on 2012-07-09

GenBank Submission: KX797015

> BO32109.complete
GAAGTTATCAGTCGACATGTCATTCTTACGCAGTGCTGTTGGTCTCCTGG
CTCGTGTCAAGCTCTTGGAGGGCTCACCGACTGTGCAAACGAGGCGCCAC
ATCAAGCGATGGGTTTCGCCAACGTTACGTGAGCTCGCCCACCGGCAGAA
GAAACTAGGACCACAAAAGCCAGAGCGGCGTTCTGGGTTCGTGGAGTGGA
ACCAGCGATCGGAGCTCTTCGCGTTCGGCAAGCGTTTGGGCGAATCCTTT
GAATTGTCGGAGCTGCAGCGTGCTTTTACAGAGAAATCGTTTGCAGAGCG
GGAGGAGGATCGTCGTCGGCAGCTAGGCATTGAGGAGTCTGACCTCCAGA
TGCCTCACAATAGCGATCTGGTCGAGAAGGGCCAACAAATTGCCCGTGCC
TACGTTGAGGCCTTCCTGCAGCACCAGTTACCGAAGGTCCCTAATGAAGG
ACTCCAGGCGATCGCCAGTTATCTACTTAGCACCGAAACGCTTGCTCACG
TCTCGACCCACCTGGGCACAAAGGATCTGATACAGTCTACGGAATACCCG
CCCTCGGCCGAAAGTCAGGCCAAATCTTTACACGCAGTTATTGGCGCCCT
GGCCAGTTCCAGTGGAATCGAGAGGGCTTTCATTTTTGTACGCGATTTCA
TCTGCACGCAACTGAATCAAAAGGACCTGTTGGAGGTGTGGACTCCCCAG
GAACCAATCCAGCTGCTGGAGAAGATATGCCAGGAGCGAAAGCTGGGCGA
AGCGGAGCCCCGCCTGCTTGGAGACTGCGGAAAGAACACTGTGCTAGCCG
CCTACCAAGTAGGCATCTACGCCAACCGGCAGCTACTGGGCAAGGGATTC
GGTGAAGATGTGAAAACAGCCACAGAGACTGCGGCACTCGACGCTCTGCA
GAGCATCTTTGACACCCGCGACAACCGGAGACCCTTTGACTTTGCCATTC
AGCTAGAACCAAAGACCGTGCGACTTGGCGCAAGCTTTCTAGACCAT

BO32109.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:40:00
Subject Length Description Subject Range Query Range Score Percent Strand
mRpL44-RA 966 CG2109-PA 1..963 17..979 4815 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:40:01
Subject Length Description Subject Range Query Range Score Percent Strand
mRpL44-RA 1122 CG2109-RA 59..1021 17..979 4815 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:39:58
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 5469564..5470460 979..83 4485 100 Minus
3R 32079331 3R 5470512..5470578 83..17 335 100 Minus
Blast to na_te.dros performed on 2014-11-28 11:39:59 has no hits.

BO32109.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-07-09 16:49:20 Download gff for BO32109.complete
Subject Subject Range Query Range Percent Splice Strand
mRpL44-RA 83..1045 17..981 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:29:32 Download gff for BO32109.complete
Subject Subject Range Query Range Percent Splice Strand
mRpL44-RA 59..1021 17..981 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:48:50 Download gff for BO32109.complete
Subject Subject Range Query Range Percent Splice Strand
mRpL44-RA 59..1021 17..981 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:48:50 Download gff for BO32109.complete
Subject Subject Range Query Range Percent Splice Strand
3R 5469561..5470459 84..981 99 <- Minus
3R 5470512..5470578 17..83 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:29:32 Download gff for BO32109.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 1295283..1296181 84..981 99 <- Minus
arm_3R 1296234..1296300 17..83 100   Minus

BO32109.pep Sequence

Translation from 16 to 997

> BO32109.pep
MSFLRSAVGLLARVKLLEGSPTVQTRRHIKRWVSPTLRELAHRQKKLGPQ
KPERRSGFVEWNQRSELFAFGKRLGESFELSELQRAFTEKSFAEREEDRR
RQLGIEESDLQMPHNSDLVEKGQQIARAYVEAFLQHQLPKVPNEGLQAIA
SYLLSTETLAHVSTHLGTKDLIQSTEYPPSAESQAKSLHAVIGALASSSG
IERAFIFVRDFICTQLNQKDLLEVWTPQEPIQLLEKICQERKLGEAEPRL
LGDCGKNTVLAAYQVGIYANRQLLGKGFGEDVKTATETAALDALQSIFDT
RDNRRPFDFAIQLEPKTVRLGASFLDH

BO32109.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:07:20
Subject Length Description Subject Range Query Range Score Percent Strand
mRpL44-PA 321 CG2109-PA 1..321 1..321 1629 100 Plus