BO32112.complete Sequence
391 bp assembled on 2012-07-09
GenBank Submission: KX796678
> BO32112.complete
GAAGTTATCAGTCGACATGAGCTCCGCGGAAGAAAACAGCAACAGCCCGG
CCACCACGCCCCAGGACACCGAGACCACCGAGCAGGCTAACCTCACGGAT
CTCGAGAAGATCGAGGAGGAGAAACTCAAGTCCAAGTATCCCAGCGGAAT
GCGCGTGCCGGGCGGACACTCGGCCTTCCTCCAGAAAAGGCTGCAGAAGG
GGCAAAAGTTCTTCGACTCGGGCGATTACCAGATGGCCAAGCAGAAGGGT
GGCGGCGTCAAGCAGGTCTTTGCCAACAAGGTGACCACCGGGGAGGCCAT
TCCCACGCCCGAAACCGTGCCGGCGCGCAAGACTTCGATCATCCAACCCT
GTAACAAGTTCCCGGCGACGAGCGCAAGCTTTCTAGACCAT
BO32112.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:41:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
endos-RF | 360 | CG6513-PF | 1..357 | 17..373 | 1785 | 100 | Plus |
endos-RE | 360 | CG6513-PE | 1..357 | 17..373 | 1785 | 100 | Plus |
endos-RD | 360 | CG6513-PD | 1..357 | 17..373 | 1785 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:41:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
endos-RF | 1165 | CG6513-RF | 384..740 | 17..373 | 1785 | 100 | Plus |
endos-RE | 1356 | CG6513-RE | 329..685 | 17..373 | 1785 | 100 | Plus |
endos-RD | 1191 | CG6513-RD | 410..766 | 17..373 | 1785 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:41:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 14030807..14030992 | 202..17 | 930 | 100 | Minus |
3L | 28110227 | 3L | 14030250..14030421 | 373..202 | 860 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 11:41:24 has no hits.
BO32112.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-07-09 17:25:25 Download gff for
BO32112.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
endos-RA | 327..683 | 17..375 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:30:00 Download gff for
BO32112.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
endos-RD | 410..766 | 17..375 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:49:20 Download gff for
BO32112.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
endos-RD | 410..766 | 17..375 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:49:20 Download gff for
BO32112.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 14030807..14030992 | 17..202 | 100 | | Minus |
3L | 14030248..14030420 | 203..375 | 98 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:30:00 Download gff for
BO32112.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 14023348..14023520 | 203..375 | 98 | <- | Minus |
arm_3L | 14023907..14024092 | 17..202 | 100 | | Minus |
BO32112.pep Sequence
Translation from 16 to 391
> BO32112.pep
MSSAEENSNSPATTPQDTETTEQANLTDLEKIEEEKLKSKYPSGMRVPGG
HSAFLQKRLQKGQKFFDSGDYQMAKQKGGGVKQVFANKVTTGEAIPTPET
VPARKTSIIQPCNKFPATSASFLDH
BO32112.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:08:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
endos-PF | 119 | CG6513-PF | 1..119 | 1..119 | 614 | 100 | Plus |
endos-PE | 119 | CG6513-PE | 1..119 | 1..119 | 614 | 100 | Plus |
endos-PD | 119 | CG6513-PD | 1..119 | 1..119 | 614 | 100 | Plus |
endos-PC | 119 | CG6513-PC | 1..119 | 1..119 | 614 | 100 | Plus |
endos-PB | 119 | CG6513-PB | 1..119 | 1..119 | 614 | 100 | Plus |