BO32118.complete Sequence
997 bp assembled on 2012-07-09
GenBank Submission: KX798859
> BO32118.complete
GAAGTTATCAGTCGACATGAACTTCCCACTGGCGAGCGTCAACAAGGATA
CGTTGCGGGCTGCCTGCAAGAAATGCGGCTACGCCGGTCACCTGACCTAC
CAATGCCGCAATTTTCTCAAGGTGGACCCCAACAAGGAGATCCTGCTGGA
TGTGGAGAGCACCAGCTCAGACTCGGAGCTGGACTACCTTACGCCGCTCA
CCGAACTGAGAGCCCAGGAGCTGAAGAGTGGCGCTGAGGTGCCGCCGCCA
ACGGAGCCAGCGGTGCTTCCCGCGGCAGGCAAACGGGACAGGAGCAAGGA
CAAGAGCCGCGACAGGCTCAAGGCGAAGAAGCGGGAAAGGGAGCGGGAGA
GAGAGAAGGTGAAGGAGAAAGAGAAGGAGAAGGGTAGCCGGAGCAAGGAC
AAGAAGCGTAGCCACTCAAAGAGCAGCCACAAGCTGGCCGAGAAGAGCAA
GGACAAGAAGTCGGTGCGGCACAAGAAGCATGGCAAGAAGAGGAGCCGGA
AGCACAAAAAGACCACAAACACCAACAATAGCAGCAGCAACAGCAGCAGC
GAGCTGGCCAAAACCAAAACAGGCAAGCGACCGAGCAGCGGCAGCACCAA
CAAGAAGTCAAAACGACGACGATCATCCTCCACCTCTAGCTCGGATTCGT
CGTCGTCGTCGTCGTCCTCCTCCTCCTCCTCGTCATCAACCAGCAGCTCA
TCGTCGTCATCGAGCGATGATTCGAGTGATGACTCCTCCACATCGAGCGA
TTCGTCTGAATCGGATTCCAGCGACAACGAGGAGTCCAGCACCAGTGAAT
CGGATGAGTACGGACGCAAGAAGAAGCGGCAGGGCAAGTACAAGCGCAAG
TCCACGGACACGGCCATGCTGCGACGCAAGAAGACCAAGGCGAAGCGGAA
GCGACATCGTGCCGGCGGATCCGGTGCTCCGACCGCCGGCAGCAGCTACC
TGAGCAGCCTCAGCGACAGCAGCACCTACGCAAGCTTTCTAGACCAT
BO32118.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:40:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3918-RA | 966 | CG3918-PA | 1..963 | 17..979 | 4815 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:40:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3918-RA | 1808 | CG3918-RA | 226..1189 | 16..979 | 4820 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:40:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 6524864..6525723 | 120..979 | 4300 | 100 | Plus |
| X | 23542271 | X | 6524689..6524796 | 16..123 | 540 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 11:40:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6723..6901 | 422..603 | 235 | 63.2 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6744..6921 | 422..602 | 222 | 59.7 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6727..6875 | 483..627 | 219 | 67.8 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6734..6864 | 470..599 | 219 | 68.9 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6721..6831 | 496..605 | 218 | 73 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2626..2894 | 366..635 | 214 | 59.6 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2196..2584 | 281..654 | 205 | 54.5 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2308..2494 | 419..605 | 200 | 61.2 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2337..2471 | 472..606 | 197 | 65.5 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2251..2434 | 429..613 | 193 | 62 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1035..1147 | 442..552 | 190 | 67.8 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1024..1163 | 488..627 | 185 | 65.5 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6701..6842 | 493..633 | 184 | 66.2 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2309..2432 | 504..622 | 183 | 66.4 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6736..6954 | 361..574 | 180 | 59.2 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6726..6888 | 446..605 | 176 | 62.3 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6724..6861 | 466..602 | 174 | 65.3 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1030..1176 | 474..616 | 167 | 62 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2590..2921 | 282..603 | 157 | 54.9 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1477..1592 | 444..555 | 147 | 65.8 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2619..2689 | 514..581 | 141 | 69 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2754..2890 | 470..608 | 140 | 58.6 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2307..2499 | 514..711 | 139 | 55.8 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2312..2452 | 466..605 | 135 | 58 | Plus |
| gypsy11 | 4428 | gypsy11 GYPSY11 4428bp | 969..1034 | 508..572 | 129 | 70.1 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1048..1126 | 473..552 | 127 | 67.1 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1025..1135 | 441..552 | 125 | 59.3 | Plus |
| TART-B | 10654 | TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). | 128..200 | 505..576 | 119 | 64.4 | Plus |
| TART-B | 10654 | TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). | 9158..9230 | 505..576 | 119 | 64.4 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2883..2928 | 940..985 | 113 | 71.7 | Plus |
BO32118.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-07-09 16:49:21 Download gff for
BO32118.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3918-RA | 218..1180 | 17..981 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:29:34 Download gff for
BO32118.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3918-RA | 227..1189 | 17..981 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:48:52 Download gff for
BO32118.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3918-RA | 227..1189 | 17..981 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:48:52 Download gff for
BO32118.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 6524690..6524794 | 17..121 | 100 | -> | Plus |
| X | 6524866..6525723 | 122..981 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:29:34 Download gff for
BO32118.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 6418723..6418827 | 17..121 | 100 | -> | Plus |
| arm_X | 6418899..6419756 | 122..981 | 99 | | Plus |
BO32118.pep Sequence
Translation from 16 to 997
> BO32118.pep
MNFPLASVNKDTLRAACKKCGYAGHLTYQCRNFLKVDPNKEILLDVESTS
SDSELDYLTPLTELRAQELKSGAEVPPPTEPAVLPAAGKRDRSKDKSRDR
LKAKKREREREREKVKEKEKEKGSRSKDKKRSHSKSSHKLAEKSKDKKSV
RHKKHGKKRSRKHKKTTNTNNSSSNSSSELAKTKTGKRPSSGSTNKKSKR
RRSSSTSSSDSSSSSSSSSSSSSSTSSSSSSSSDDSSDDSSTSSDSSESD
SSDNEESSTSESDEYGRKKKRQGKYKRKSTDTAMLRRKKTKAKRKRHRAG
GSGAPTAGSSYLSSLSDSSTYASFLDH
BO32118.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:07:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3918-PA | 321 | CG3918-PA | 1..321 | 1..321 | 1597 | 100 | Plus |
| PNUTS-PA | 628 | CG33526-PA | 228..479 | 45..291 | 249 | 33.2 | Plus |
| PNUTS-PB | 628 | CG33526-PB | 228..479 | 45..291 | 249 | 33.2 | Plus |
| PNUTS-PE | 1135 | CG33526-PE | 228..479 | 45..291 | 249 | 33.2 | Plus |
| PNUTS-PD | 1135 | CG33526-PD | 228..479 | 45..291 | 249 | 33.2 | Plus |
| PNUTS-PA | 628 | CG33526-PA | 226..417 | 119..304 | 218 | 33.7 | Plus |
| PNUTS-PB | 628 | CG33526-PB | 226..417 | 119..304 | 218 | 33.7 | Plus |
| PNUTS-PE | 1135 | CG33526-PE | 226..417 | 119..304 | 218 | 33.7 | Plus |
