BO32142.complete Sequence
1036 bp assembled on 2012-07-09
GenBank Submission: KX796538
> BO32142.complete
GAAGTTATCAGTCGACATGCCCTCCATATGGCTGTTAGTCTCGACGCTGG
CTTTGGTTAGCTGCCAGGACTATCATTACCACCGTCCACAGACTCCTTTC
GTTGCGGAATCTTACCATCAGCACCAGCAGCCTCAAGCCACCAAGTTTGT
GGTGCAGACTTTGGGTCGCACCTACGGTTTGGAAACCCAAAGGGCACCAG
CCATCTATGAGGATTATCAGACGCATATTGTGCAGCTCTTCCAGCAGCGA
CAGGTGCCGCAGTATCATCAGGCTCCCCGCCAACAATTGCACACTTCTAG
CTACCAGAATCCCCTGCTGGTCAGCGCCAACTACCAGGCCGGCACCGTGT
CCTTGGCGCCTCCAGCTCCCGCTGCTCCTGCCCAGCCACTGACCAGCTAT
GGGCCACCTCACCTGCAGCACCAGTCACAGCCTCTGCAACCTCCACCGCA
GACTCCCCAATACTTCCCCCAACAGCAGCAGCCACCTGCAAGCTATTTGC
CACCTCAGCAGCCTGCCCAGAAATTGTTCTTCGGCAATCCGTTTCCCTAT
GCCCCTGTGACGACCGGCTCGGGGCAACAGGTGCTGGATGCAGGACATGG
ATCAGGTGTGGCGCCCAATGAAGTGCAGGCTCAGCTTTTGCAAGCCACCG
GAGCTGCGCCACCACAAACTCGAGTGGGTAACCAGGTGGCTCAGTCGCAG
AGCTCCTCTTTGGATGCCTATGACTACAAGCAGAGCACTCCCGGAGAAAA
CCGAGAGTACCAAAGGTTCGTCACCAGCTGCCCGGGAGGTGGAGCCTGCC
AGCAGAAGGAGTTCAATCCAGGCGAGGTGGATGAGAGCCACCAGCGGGTT
CTGCAGACAGTGCGAGCCAGTACCCAACCTCGAGTGGAGGGCTGCTACAA
GAGCCAGGTGATCTATGTGCCAGCGGGAGCTGCTGTCAATAGTCAGGGTC
AGTTGCGACCAAAGAATCGACGCACTTTCGAGCGCAAGGAGCAGGTCCTC
TCCAGATACCCCTACAACGCAAGCTTTCTAGACCAT
BO32142.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:40:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7080-RA | 1005 | CG7080-PA | 1..1002 | 17..1018 | 5010 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:40:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7080-RA | 1178 | CG7080-RA | 69..1070 | 17..1018 | 5010 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:40:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 22329466..22330438 | 46..1018 | 4865 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 11:40:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2260..2461 | 323..522 | 130 | 57 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6761..6911 | 363..512 | 130 | 58.4 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6720..6809 | 392..485 | 118 | 61.7 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1521..1598 | 410..493 | 110 | 61.9 | Plus |
BO32142.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-07-09 16:49:23 Download gff for
BO32142.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7080-RA | 68..1069 | 17..1020 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:29:37 Download gff for
BO32142.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7080-RA | 68..1069 | 17..1020 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:48:56 Download gff for
BO32142.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7080-RA | 69..1070 | 17..1020 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:48:56 Download gff for
BO32142.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 22329368..22329397 | 17..46 | 100 | -> | Plus |
| 3R | 22329467..22330438 | 47..1020 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:29:37 Download gff for
BO32142.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 18155090..18155119 | 17..46 | 100 | -> | Plus |
| arm_3R | 18155189..18156160 | 47..1020 | 99 | | Plus |
BO32142.pep Sequence
Translation from 16 to 1036
> BO32142.pep
MPSIWLLVSTLALVSCQDYHYHRPQTPFVAESYHQHQQPQATKFVVQTLG
RTYGLETQRAPAIYEDYQTHIVQLFQQRQVPQYHQAPRQQLHTSSYQNPL
LVSANYQAGTVSLAPPAPAAPAQPLTSYGPPHLQHQSQPLQPPPQTPQYF
PQQQQPPASYLPPQQPAQKLFFGNPFPYAPVTTGSGQQVLDAGHGSGVAP
NEVQAQLLQATGAAPPQTRVGNQVAQSQSSSLDAYDYKQSTPGENREYQR
FVTSCPGGGACQQKEFNPGEVDESHQRVLQTVRASTQPRVEGCYKSQVIY
VPAGAAVNSQGQLRPKNRRTFERKEQVLSRYPYNASFLDH
BO32142.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:07:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7080-PA | 334 | CG7080-PA | 1..334 | 1..334 | 1785 | 100 | Plus |
