BO32215.complete Sequence
1108 bp assembled on 2012-07-27
GenBank Submission: KX797033
> BO32215.complete
GAAGTTATCAGTCGACATGGAGATGGCCTACAATGCGTCATCGTCGGCGG
CCTCCGTCGGCTCTGCTTCTGCCGCCGCCTCTGCCACCGCCTCCTTCGCC
TTCACCAACACCGCCAAGCTGCCCATCGAAACGGTGAAGCGCCTGATTGC
CGCCGTCTCACGACGTCCGATGTTGTGGCTGCGCAACAATGCCAATGGCC
AGAAGCGCAGCGACATCACGCCTGTTTGGTTCGAGGTGGGTCAGGATGTG
AATTTGCCAGCCGACATCTGCCGAATTAAGTGGGGCCACCTGAGGGACAA
CTTTCGCAAGGTGTACATCCGCAATAACCTGTCCAATGAGACGCCCTCGT
CGTGGCGCTTCTACAACGATATGCGGTTCATGGAGCCCGCCGTTCACGAG
AATATCATGCGTCAGACGCGAAGCAGCAGCAAGAAGCACCCACCCGGACA
CTGGACGGAGAACAATAATGTGCTGGGGCCGGACAAGTATGACTCAATGC
CCATTGTTGCTACGGAGCCCATATGCGAGCTCAGCCACAGCTATGACTCG
GAGCTACACCAGCCCAGCTTCTCGGACATCAGTTCGTTCTTCGAGGATCG
CGACTGCCAGCCGCCGGAGAATAAGAGATTTAAGTCGGAGCCCAGTCAGA
GGGAGGAGGACGAGGAGGATGACGATGACTTCGACGAAGATGCCGCCTCG
GAGAACTTGGAAGAGGAACGCGGCAATCGTGCCGATGCTGCCAGTTCCGG
TGTATTCACCATAGAAGTGCTCGATGACGACGACGAAATGGAGCAGGCGG
TGACCAAGACCAAGGCGAATAACACTAGCCACGGCGGATCCAGCCTGAAG
AGCGAGCAGGAGGCCAAGGTGTTCTCCAATTCGCAGTCACCCACCGCCGA
TCTGCCATTCAAGTATATCAGCACGGATGTGGCCACGAATACGGATCCCT
CTGGTGGAGATCTCCAGGACGAGGCGGATCGCATGTTCCTGCTCAGTCTG
ATGCCCTTCCTGCAAAGATTGGACAGCCGCCGGCGTCTGCGCGTGCGCCA
GAAATTACAGAACGTGCTCATCGAGGAACTGGAGTTTGGCGCAAGCTTTC
TAGACCAT
BO32215.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:46:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Coop-RB | 1077 | CG1621-PB | 1..1074 | 17..1090 | 5370 | 100 | Plus |
| Coop-RA | 1077 | CG1621-PA | 1..1074 | 17..1090 | 5370 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:46:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Coop-RB | 1413 | CG1621-RB | 121..1197 | 14..1090 | 5385 | 100 | Plus |
| Coop-RA | 1690 | CG1621-RA | 398..1474 | 14..1090 | 5385 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:46:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 7491052..7491884 | 1090..258 | 4165 | 100 | Minus |
| 2R | 25286936 | 2R | 7491946..7492192 | 260..14 | 1235 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 11:46:35 has no hits.
BO32215.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-07-27 14:02:52 Download gff for
BO32215.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1621-RA | 391..1464 | 17..1092 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:32:09 Download gff for
BO32215.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Coop-RA | 401..1474 | 17..1092 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:51:01 Download gff for
BO32215.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Coop-RA | 401..1474 | 17..1092 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:51:01 Download gff for
BO32215.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 7491049..7491881 | 261..1092 | 99 | <- | Minus |
| 2R | 7491946..7492189 | 17..260 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:32:09 Download gff for
BO32215.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 3378554..3379386 | 261..1092 | 99 | <- | Minus |
| arm_2R | 3379451..3379694 | 17..260 | 100 | | Minus |
BO32215.pep Sequence
Translation from 16 to 1108
> BO32215.pep
MEMAYNASSSAASVGSASAAASATASFAFTNTAKLPIETVKRLIAAVSRR
PMLWLRNNANGQKRSDITPVWFEVGQDVNLPADICRIKWGHLRDNFRKVY
IRNNLSNETPSSWRFYNDMRFMEPAVHENIMRQTRSSSKKHPPGHWTENN
NVLGPDKYDSMPIVATEPICELSHSYDSELHQPSFSDISSFFEDRDCQPP
ENKRFKSEPSQREEDEEDDDDFDEDAASENLEEERGNRADAASSGVFTIE
VLDDDDEMEQAVTKTKANNTSHGGSSLKSEQEAKVFSNSQSPTADLPFKY
ISTDVATNTDPSGGDLQDEADRMFLLSLMPFLQRLDSRRRLRVRQKLQNV
LIEELEFGASFLDH
BO32215.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:10:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Coop-PB | 358 | CG1621-PB | 1..358 | 1..358 | 1863 | 100 | Plus |
| Coop-PA | 358 | CG1621-PA | 1..358 | 1..358 | 1863 | 100 | Plus |
