BO32217.complete Sequence
1177 bp assembled on 2012-07-09
GenBank Submission: KX795251
> BO32217.complete
GAAGTTATCAGTCGACATGGCCGGCGGATTTCGACCGTACGATCAGGACT
CGTGTCCTAACCTTACAAATAGCGAGGCTCCGGAATTCAGCATGTCAGTC
GTTTGCAAAACGGAGCCGCACTACTTTCATCCGCAGACTGCTATCCTGCC
CAGCGTCCAGTACTCCCACCCATATCACCACTATCTGAGCCAGTTCGCCC
CGAACTTCGTGCCCTACTACTACCGCCTGCTCTCGCGGCCCATAATGAAG
CAGGAGGAGATGGACATCGAGAACTACATCAACTACGAGGTGGCCGCCCA
GCAGACCATGATGCGCCAGCGGACCCTGAAGCCCCTGGGTCAGCTGCAGA
TCCAAATGCCGCCTCCCATAATAGTCAACCAGCCAGTTAAGCCAGTTCCC
GTTAAGGCAGTGCCAGTCCGCCGAAGCTCTCCGCCCAAGCGACGCGTCAT
CAATGCCCAGTTGGTAGCGGTAGCCACCGCTTCCGGGGGCATTAAGAACA
TCGAACCGCGGGTGGAGCCACTGCCTCGCCTGGAGGAATCCTTTAAGCAG
CAAGTGGCCAAAATCCAGAAGAGTCAGCACCACTACGAACAACTCTTTGG
TCGTCTCACTTCCATGCTAAAGACCCTGAATCAGCGGTACGACAACGATG
CCGAGGATGTGCCCGCGCCGCCCTCCAAGAGACCGCGCCACATGTCCACC
AGTTCGTCGGAATCGCACATCCCAGATACTGCCTCTGAAAAGGACGAGAA
AGACACTCTTGTGCAGTACCCGCACCGAGTGCAAAAGGAGGACGGCAGTG
CGGTGTACGTACTGGGACCCAATGGCACCCAGATCACAGCCCATCAGTAC
GGTGAGGTCTTCTGGACCAACGCCCCGGTGGCCACGAGGTGTCTTCTTTG
CGTTGTCTTCAGCAGCGATGAGTTGGCTACCCACACGCTGACCGGGAAGC
CGTCGCCCGCATTCTACGGCCGCGAAAGACCCCCAAAGCTCCAGTTAGAC
CAACGCAAGGTGGACGACATCGTGGTCTGTGTGAGAAACCGGACGGGCGG
CAAGGAACGGGTGATTCGGGCCACCATCACTACCAAGTGTGCGGATACCG
CCAAGAAGTACAAGAGGCGGGCCAAGAAGGCCCAGAAGGTCGCCATCAAG
GAGGAGTATGCAAGCTTTCTAGACCAT
BO32217.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:39:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Elba2-RA | 1146 | CG9883-PA | 1..1143 | 17..1159 | 5715 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:39:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Elba2-RA | 1493 | CG9883-RA | 177..1319 | 17..1159 | 5715 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:39:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 2577863..2579005 | 17..1159 | 5715 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 11:39:18 has no hits.
BO32217.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-07-09 16:49:13 Download gff for
BO32217.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9883-RA | 193..1335 | 17..1161 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:29:14 Download gff for
BO32217.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Elba2-RA | 177..1319 | 17..1161 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:48:34 Download gff for
BO32217.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Elba2-RA | 177..1319 | 17..1161 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:48:34 Download gff for
BO32217.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 2577863..2579005 | 17..1161 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:29:14 Download gff for
BO32217.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 2577863..2579005 | 17..1161 | 99 | | Plus |
BO32217.pep Sequence
Translation from 16 to 1177
> BO32217.pep
MAGGFRPYDQDSCPNLTNSEAPEFSMSVVCKTEPHYFHPQTAILPSVQYS
HPYHHYLSQFAPNFVPYYYRLLSRPIMKQEEMDIENYINYEVAAQQTMMR
QRTLKPLGQLQIQMPPPIIVNQPVKPVPVKAVPVRRSSPPKRRVINAQLV
AVATASGGIKNIEPRVEPLPRLEESFKQQVAKIQKSQHHYEQLFGRLTSM
LKTLNQRYDNDAEDVPAPPSKRPRHMSTSSSESHIPDTASEKDEKDTLVQ
YPHRVQKEDGSAVYVLGPNGTQITAHQYGEVFWTNAPVATRCLLCVVFSS
DELATHTLTGKPSPAFYGRERPPKLQLDQRKVDDIVVCVRNRTGGKERVI
RATITTKCADTAKKYKRRAKKAQKVAIKEEYASFLDH
BO32217.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:07:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Elba2-PA | 381 | CG9883-PA | 1..381 | 1..381 | 2006 | 100 | Plus |
| insv-PB | 376 | CG3227-PB | 172..371 | 184..380 | 251 | 30.5 | Plus |
| insv-PA | 376 | CG3227-PA | 172..371 | 184..380 | 251 | 30.5 | Plus |
| Bsg25A-PA | 363 | CG12205-PA | 249..363 | 261..374 | 230 | 43.5 | Plus |
