BO32220.complete Sequence
1450 bp assembled on 2012-07-27
GenBank Submission: KX797988
> BO32220.complete
GAAGTTATCAGTCGACATGGCCGAAACGAGCGAAAAGATCAAGTTCCTTG
TGGCGGACACCACAGCCTTTATAAACGCCGTGCCCCTGAATGAATACGCG
GAGCAGGTGCTCACCGTGCCGGATGTGGTGGCCGAAGTGCGCAACAAGCG
CCAGATTCGCCGCCTCTGCGTTCTGCCCTTCGACCTCCAGGTGCGCGAGC
CTCGTCCGGAGAGCATTAAACACTGCGTGGAGTTCGCCAAGAAAACGGGT
GACTACGCGAGTCTCTCGGGGATCGATCTGAAAGTGATCTCGCTCACCTA
CGAACTGGAAGCAGACAACGTGGGCACTGATCACCTGCGCCAGGAGCCTG
TGATGGCGCAGACCATTGCGTCCAAGGATAAACCCGAGGAGATGCAGGAT
GCTAATAACAAGAGACTGGTCGGTTGGTACATGCCCGAGGGCGAAGAGGA
GGAGGAGGAGGATTCCGAGGAGGAAGATGATTACTCCCAGGAAGAGGACG
ATGCTGAAGGCGATGAGCAGGAGGCAAATGAATCCCCAGACACTGTTAAA
GCCGCCATCGAAGCCCAATTGGCCGGCAAGGAACCATTTGCCAGCGAGAC
CATCGAAAAGGAGGAGGACCAAGACCAGGAGCCCAGTCAGGAGGAGCTGG
ACAAGCTGTTCGAGCAGCTCAAATGCGCACCCAGTGCCGAGGAAGAGAAA
GAGCTCTCGGAACTGCTCGTTTCCCAGCCGGCCGAAGTAGATGAGGAGGT
ATCCGAGCCACAAGAAGCCAAACAGAGCCAAAATCTCGACGAGGATGTGG
GTGACGATGGCTGGATCACGCATTCAAACATCAAGAAGGCCAAGAAAGCG
CTCGAGGGCAAAGTGGAAACGGATGAAGTGCCGCCCGTCGCCTGCATGAC
CACCGATTATGCGCTGCAGAACGTGCTCAAGCAGCTAAATCTCCACCTGG
CCGCCCTCAATGGCCGGATCATCAAGCAGTTGCGCACATATATACTCCGC
TGCTACGCGTGCTACAAGACCACCAGCATCATGACCAAGGTGTTTTGCCC
CAATTGTGGCAACAAGACGCTGAAACGTGTGGCCGTCAGTCTGGACGAGA
ACGGTCGCCAGGTGATTCACATCAATACGCGCCGTCCGCTGACCAATAAG
TACAAGAATCAGAGCCTGCCTCGCTTCCAGGGCGGCAAGCATTCGAGAAA
TCCGATCCTGTTCGAGGATCAGCCGATGCCCAGGCAGATGCCGTCGCGCG
TTGCCAAGACCAAGACGAACGCTCTGGATCAGGACTACACGGCCGGATTC
TCGCCCTTCGTGCTGCGCGACGTGGACTCCAAGTCCGCCATGCTGCGCTC
CAAGGGCAACCTCAAGGAGTGGGCCAGGAATAACAACTTCGAGGAGGATC
GCCGGCGCAAGAACTACAATCGCTTGTACAAGGCAAGCTTTCTAGACCAT
BO32220.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 11:46:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2972-RB | 1419 | CG2972-PB | 1..1416 | 17..1432 | 7080 | 100 | Plus |
| CG2972-RA | 1419 | CG2972-PA | 1..1416 | 17..1432 | 7080 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 11:46:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2972-RB | 1838 | CG2972-RB | 95..1510 | 17..1432 | 7080 | 100 | Plus |
| CG2972-RA | 1630 | CG2972-RA | 95..1510 | 17..1432 | 7080 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 11:46:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 10083382..10084722 | 92..1432 | 6705 | 100 | Plus |
| X | 23542271 | X | 10083248..10083323 | 17..92 | 380 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 11:46:41 has no hits.
BO32220.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-07-27 14:02:53 Download gff for
BO32220.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2972-RA | 79..1494 | 17..1434 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:32:11 Download gff for
BO32220.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2972-RA | 95..1510 | 17..1434 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:51:03 Download gff for
BO32220.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2972-RA | 95..1510 | 17..1434 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 12:51:03 Download gff for
BO32220.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 10083248..10083322 | 17..91 | 100 | -> | Plus |
| X | 10083382..10084722 | 92..1434 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:32:11 Download gff for
BO32220.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 9977281..9977355 | 17..91 | 100 | -> | Plus |
| arm_X | 9977415..9978755 | 92..1434 | 99 | | Plus |
BO32220.pep Sequence
Translation from 16 to 1450
> BO32220.pep
MAETSEKIKFLVADTTAFINAVPLNEYAEQVLTVPDVVAEVRNKRQIRRL
CVLPFDLQVREPRPESIKHCVEFAKKTGDYASLSGIDLKVISLTYELEAD
NVGTDHLRQEPVMAQTIASKDKPEEMQDANNKRLVGWYMPEGEEEEEEDS
EEEDDYSQEEDDAEGDEQEANESPDTVKAAIEAQLAGKEPFASETIEKEE
DQDQEPSQEELDKLFEQLKCAPSAEEEKELSELLVSQPAEVDEEVSEPQE
AKQSQNLDEDVGDDGWITHSNIKKAKKALEGKVETDEVPPVACMTTDYAL
QNVLKQLNLHLAALNGRIIKQLRTYILRCYACYKTTSIMTKVFCPNCGNK
TLKRVAVSLDENGRQVIHINTRRPLTNKYKNQSLPRFQGGKHSRNPILFE
DQPMPRQMPSRVAKTKTNALDQDYTAGFSPFVLRDVDSKSAMLRSKGNLK
EWARNNNFEEDRRRKNYNRLYKASFLDH
BO32220.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:10:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2972-PB | 472 | CG2972-PB | 1..472 | 1..472 | 2441 | 100 | Plus |
| CG2972-PA | 472 | CG2972-PA | 1..472 | 1..472 | 2441 | 100 | Plus |
