BO32308.complete Sequence
813 bp assembled on 2012-09-04
> BO32308.complete
GAAGTTATCAGTCGACATGTTGGAAATATTTAGGACGCCCTATGCGGACT
CCAAACAGCTGCCGTTGGCAACTGGACCCGGTCCCATCATAATTATCCTC
ATTGGATACCTTCTGGTAGTTTTTAAGGCCGGCAGGAAGTTCATGGAGCA
TCGAGAACCTTATAATCTGCGAAAAGTGCTTAAGTACTATAACATGTTCC
AGATATTCTACAATATAATGATGCTCCTGCCCGGATACTACTTCATGTTG
GTATTCCAACCGTACAACTTTCGCTGCATGACTGTCCTGCAGCAGGATCA
TCCGCTGAAGAACTGGGAGCGCTGCATCAGCTATGCTTACTACATAAACA
AGATCGTTGACCTGCTTGACACCGTGTTCTGCGTGCTGCGCAAGAAGTAC
TCGCAAATAACGTTTTTGCACGTTTTCCACCACGTCCTGATGCCATCCGC
CGGATACTTGATAATACGATTCTATGGCTACGGAGGTCAACTCTTCTTCC
TGTGCTCCTTCAATGTATTCGTTCATATCTTCATGTATGCCTATTACTAT
TCGGCCATCAAGGGCAATACGGTGCGTTGGAAGCGGTACTTGACCCTCAT
GCAAATGCTGCAGTTCCTCCTCATGTTTGGCCATTGCGCCTTAACCGCCA
TGCAGCGGCAGTGCACTGCATCGCAGGGAACCCTCTTTCTGGTCAGCTGC
TCCGCGACCATCATGTTTATCATGTTCGCCAACTTTTATTTCCAGTGCTA
CCTGAGACCGAAGCATAAGGAGAACGCAAGCTTTCTAGACCATTCGTTTG
GCGCGAAAAGGGG
BO32308.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 12:55:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31141-RA | 762 | CG31141-PA | 1..759 | 17..775 | 3795 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:55:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31141-RA | 961 | CG31141-RA | 79..837 | 17..775 | 3795 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 12:55:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 23923653..23924195 | 233..775 | 2715 | 100 | Plus |
| 3R | 32079331 | 3R | 23923378..23923594 | 17..233 | 1085 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 12:55:23 has no hits.
BO32308.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-09-04 11:55:42 Download gff for
BO32308.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31141-RA | 84..845 | 22..783 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:48:13 Download gff for
BO32308.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31141-RA | 84..845 | 22..783 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:16:54 Download gff for
BO32308.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31141-RA | 84..845 | 22..783 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:16:54 Download gff for
BO32308.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 23923383..23923593 | 22..232 | 100 | -> | Plus |
| 3R | 23923653..23924203 | 233..783 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:48:13 Download gff for
BO32308.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 19749105..19749315 | 22..232 | 100 | -> | Plus |
| arm_3R | 19749375..19749925 | 233..783 | 99 | | Plus |
BO32308.pep Sequence
Translation from 16 to 811
> BO32308.pep
MLEIFRTPYADSKQLPLATGPGPIIIILIGYLLVVFKAGRKFMEHREPYN
LRKVLKYYNMFQIFYNIMMLLPGYYFMLVFQPYNFRCMTVLQQDHPLKNW
ERCISYAYYINKIVDLLDTVFCVLRKKYSQITFLHVFHHVLMPSAGYLII
RFYGYGGQLFFLCSFNVFVHIFMYAYYYSAIKGNTVRWKRYLTLMQMLQF
LLMFGHCALTAMQRQCTASQGTLFLVSCSATIMFIMFANFYFQCYLRPKH
KENASFLDHSFGAKR
BO32308.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:27:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31141-PA | 253 | CG31141-PA | 1..253 | 1..253 | 1366 | 100 | Plus |
| CG16904-PA | 262 | CG16904-PA | 1..253 | 1..249 | 701 | 50.6 | Plus |
| CG8534-PA | 265 | CG8534-PA | 14..261 | 11..255 | 615 | 48 | Plus |
| CG9459-PA | 265 | CG9459-PA | 5..262 | 1..254 | 585 | 42.6 | Plus |
| CG9458-PA | 264 | CG9458-PA | 15..260 | 11..252 | 578 | 43.3 | Plus |
