BO32515.complete Sequence
4006 bp assembled on 2012-09-07
GenBank Submission: KX795106
> BO32515.complete
GAAGTTATCAGTCGACATGAAAGCTACTCTGCTCACTGTGGTGGCACTCA
CTGCAGTGGTTGCCCTAGTTGGAGCCGCCGATCCTGAATGCATATACCGG
AGGACTAGGAACCTTCCGATGCACTGGCCGAAACCCCTGAACTGTTCCTC
CTACTACCGTTGCACCGCCAAGAACGCCGTTCGCACGGTGACGTGTGCAC
CCGGCAAGGAGTACAACCCCAAGAATGGCAAGTGCACAATGGCAGGACGA
AGTCTCTGCAAGCTGAGTCTTTTAGCTCCACTCGCTGAGGCCACCAATGT
GTGCTCCACCGAGGTGAACGGAGCGTACATAGCCAATAGTGGTTCTTGTG
GCGAGTTCTACATCTGCGACGAGCAGATTGCCTATCCACAGAAGTGCGAT
TTAGGAAGCTTCTTCAATGAAACCCTGGCCGCCTGCATACCGGATGCAAA
CTCCACGTGCTGGCAGAACCTGTGCATCAATAAGACCAATGGTGTCTTTG
TCGAAAATGAGGCGAACTGCGGTAGCTACTACGTGTGCTCCAATGGAGAA
GCCACTCTTCAGACTTGTCCCCAAGGCAGCTTTTTCAACACCTCAGTTGC
CGCCTGTACTGTCGATCAAGGAAACTCACAATGCTGGGTTAACTACTGCA
TTGGACAGGATGATGGGTCCGCTGTGGCCGACAAGTCCAACTGCTCCTTG
TTCTATGTGTGCTCCAACAATACGGCTACTGCTCAAGAATGTCCCGAAGG
AAGCTATTTTGAGAGTAATAACTGGGGTTGTGTTCCCGGCACTTGCACCA
CAGAGTCACCATGCGATGATTCCACAACCACTACCACTGAATCTTGTGCT
GAGGAGACAACGGAACCTCCGGCATCCTGCGATTGCGGTGATATTAAGAA
CGCAGACTTCATTCCCGATGAAGAAAACTGTCGCAAGTACTTCATCTGCA
TTGATGGTGTCCTGGTGGCCGCGGATTGCGGCAAGGGTAACGTGTTCAAT
GCTAACCTCAGTGTTTGTGAAGTTGATGCTGACAACACTTGCTGTGTGGC
GGATTGTACAGATGGCGAAGCAAAAGTGGATCCCCAGGACTGCACCAAGT
ACTTCAAGTGTCAAAGTGGCGACTGGACTTCCGTTTCCTGTGATAGTGGC
AGTTATTTTAATGAAACTCTAAACTGCTGCCAAGTGGATGTGAATAATGT
GTGCATTGATGCCAAGAGCAACTCAACACAGATTCCCACTACCTCAACCG
TTGAAACTAGTTCCGTTGACAAGTGCAATGCCAAGGATCCTCCAGCAAGT
GGAAAGAACTGCTGGACATACCAGCACTGCATCAGTGGCCAGTGGGAGGA
TGGCACTTGCCCCAATAACACCTACTTCGACGCCTCCGTTGGCATTTGCC
GCGAGGACACCGAAAATGTCTGCCCGGAAAACAGATCGAGCGGATCGCGC
CAAAAGCGAAGTGTGGAGGACTGCACCTGCGAGGGAGGCATCGCGCAGGG
AACCATTATAGGTCACTCGACAGACTGCGATAAGTACCTGATCTGCGAGA
ATGGTCAGTTGGTAGAGGGTGTGTGCGGGGTGGGCAATGTCTTTCAGAAG
TCCAGCGGCATCTGTGTTCCAGACACCAAGGCCACCTGCTGGGTGTGCTC
CAACAAGCCGAATGGCTACCAGATGGCCGATCCGACCGACTGCACCAGCT
ATTTGACCTGCTGGAATGGCCTGGCCACAAAGCACACATGCGGCTCCGGC
GAGTGGTACAACGGCGATGGTAATTGCGTCATCGATGTGAATGCCAAGTG
CATCAACCCATGCTCCTGCGGCAATGGCAACGTGGCCCATCCCATCTGTA
CCAATTACTTCCAGTGCACGGACGGAGTGCCCCAAGTGAAGCAATGCGTC
GTTGGAGAGGCCTTTGATTCAGCAACTGGTCAGTGCTCCACTACCGTAGA
GTGCTCCGCCAAAAACTGCGCAACCGCCAGTGATGGCACCACCTACCCTG
TCGCTGGAGAAACTGGCCAGTTCTACGTCTGCCTCAGCAACGAGGCCACC
ATTCAACCCTGCCCGGTTAACACTGGTTACTCCGCCGCCCTGGGTATATG
CCTGGACCAACCCAGCCCCGATTGCGACCAGACCATTTGTAACAGTGCCG
CTGTGGACTCGACGTATCCATCTAACGACAACGATTCGTCGACCTTCTGC
CTGTGCCGGGATAGTGGTGCTTATATTCAATCGTGTCCAACCGGATTGTT
CTACGACGCAACGGATCAAGTCTGCACATTCTCCGGAAACTGCGATCCTC
AGGTCTGCAATGACCAGTCAGAGTACTTCGTCTCTCCGGACTACGAAGAC
CCGAACAGTTTCTGCTTGTGCCGCGCTGGCGAACCCATCACTGTTTCCTG
TCCAATTGGCTACACTTTCAATACCGAGGAGCTCGAGTGTGTTCTTATTC
CACTGCCAGATCCCCGCTGTTGCGCCAATGGATGCTCAGGAAAGACGGAC
TTCTCTACTTTTCCAACTATTGAAGGTACCGACGGCTTCTGTCTCTGCGT
GGACGATGTTCCCAAGTACATTAGCTGTCCGGAAAACTCCCAATACGATT
TGGAGCTAGGTGCCTGCACCGCCACTGAGGAGGAAACCACATGCCCTGTG
AACGCTTGCACTGTTGGCATTTGCGAGAGCGCTCTGGACTTCAATACCTT
CCCTGTTTCGAGTGATCCCTCCGGTTTTTGCTACTGCCTCGACTCTTGCC
CCATCTATGAAACCTGTCTCGATGATCTGGTCTATAACGAAGATCTAAAG
AGGTGCACGGAACCAGAGGATCCTTCTGTTGTCTCCCGGTGCGATGCTGA
AAAATGTGACAGCATTCCGGATTTTACACCATATCCTTCCATCAATGGAA
CGGATGGCTTCTGCTATTGTAATGGCGGGTTGCCCGTTTTTCGGGAATGT
GAGGAAAACCAGGAATTCGATCCGGCCGTGGGATTTTGCAGAACGGTTGT
GGACTCCTGTGTGACCGCCTTGTGCGATGCTAATCAATGCGCCACCTTGG
ACAATTACGTGCCCTTCCCAACAAACACGGCCAGCGATGACGATGGCGCC
TTCTGCTACTGCAAGGATGGGGAGGTGATCTTGGAGCAGTGCAGCCCCGA
AATGGTGTTCAGTGCGGATCTGGGACGATGCACAGTTCAGGCTGCACCCG
AGTGCGTTTGCGCGCCCGGTAAGTGCGGCAGCTCCGATGGCTACACCACA
TATGAGGCTCTAAATACGAATGAGGGCTTCTGCCTGTGCGTGAGCGGAAC
TCCTGTGTTCACGGAGTGCTTAAATGGCGAGACCTATAACAGTATCCTGG
GTGCCTGCTTTTCTAGCACCGCCAAGATCATTGCCTCCGGCCTGTGCGAT
GACAGACGATGCCACAGTCGCGCCGTTGTGGATGCCACTTTTGCGGCAGT
GAATACGACCAGTGGATATTGCAGCTGCCAGGATGTCGGCGTTTCCACCT
TCATCAATTGTGCGGATGAACATGTTTACGAGGAGAGTGCAGGAACTTGT
GTGGTAGCGGCCTGTGATTACACAAGCTGTTTGAACCGAGTTGCCTTCGA
ACCCTTCGAGGCGAAGAACACCACAGAAGGATTCTGCTCCTGCGACGGTG
TGCCCTATTTCCATCAATGCCAGACGGGACACGTCTTTGACAAGGCCCAG
GGTATATGTTTGCTGAAGGACACCATGGCCATGATATCGTGCAACCTGAG
GGAATGCCTGAAGCGAAGCCAATTCGAGCCATTTGCCGCCGAGAACACCA
ATTCCGGTTTCTGCTCCTGTGACGATCTGCAGCGCGTTAGTGTTACCTAT
CATCCGTGCGGTGAGGGCGAGATCTTCGCTCCGGAATTCGGCATGTGCAC
CAGCCATAGCATCCAGAAGCGTTCCGTGGAGGCGGAGGAAAACGTAAGGT
CCCTGAACTTGTTCAAGAAATTCTTCCCAAAACTCTTCGCAAGCTTTCTA
GACCAT
BO32515.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 12:57:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG43896-RB | 3975 | CG43896-PB | 1..3972 | 17..3988 | 19860 | 100 | Plus |
| CG43896-RD | 6342 | CG43896-PD | 1..3927 | 17..3943 | 19635 | 100 | Plus |
| CG43896-RC | 6342 | CG43896-PC | 1..3927 | 17..3943 | 19635 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 12:57:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG43896-RB | 4207 | CG43896-RB | 54..4025 | 17..3988 | 19860 | 100 | Plus |
| CG43896-RD | 6617 | CG43896-RD | 54..3980 | 17..3943 | 19635 | 100 | Plus |
| CG43896-RC | 6474 | CG43896-RC | 54..3980 | 17..3943 | 19635 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 12:57:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 11976572..11978400 | 288..2116 | 9145 | 100 | Plus |
| 3L | 28110227 | 3L | 11979950..11980744 | 3194..3988 | 3975 | 100 | Plus |
| 3L | 28110227 | 3L | 11976228..11976496 | 22..290 | 1345 | 100 | Plus |
| 3L | 28110227 | 3L | 11979699..11979892 | 3001..3194 | 970 | 100 | Plus |
| 3L | 28110227 | 3L | 11979202..11979393 | 2628..2819 | 960 | 100 | Plus |
| 3L | 28110227 | 3L | 11979458..11979643 | 2817..3002 | 930 | 100 | Plus |
| 3L | 28110227 | 3L | 11978735..11978914 | 2282..2461 | 900 | 100 | Plus |
| 3L | 28110227 | 3L | 11978985..11979153 | 2462..2630 | 845 | 100 | Plus |
| 3L | 28110227 | 3L | 11978503..11978667 | 2117..2281 | 825 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 12:57:09 has no hits.
BO32515.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-09-07 10:31:46 Download gff for
BO32515.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6947-RA | 51..4022 | 17..3990 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:49:05 Download gff for
BO32515.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43896-RB | 54..4025 | 17..3990 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:17:44 Download gff for
BO32515.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43896-RB | 54..4025 | 17..3990 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:17:44 Download gff for
BO32515.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 11979460..11979642 | 2819..3001 | 100 | -> | Plus |
| 3L | 11979700..11979891 | 3002..3193 | 100 | -> | Plus |
| 3L | 11978985..11979152 | 2462..2629 | 100 | -> | Plus |
| 3L | 11979204..11979392 | 2630..2818 | 100 | -> | Plus |
| 3L | 11976224..11976495 | 17..289 | 98 | -> | Plus |
| 3L | 11976574..11978400 | 290..2116 | 100 | -> | Plus |
| 3L | 11978503..11978667 | 2117..2281 | 100 | -> | Plus |
| 3L | 11978735..11978914 | 2282..2461 | 100 | -> | Plus |
| 3L | 11979950..11980744 | 3194..3990 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:49:05 Download gff for
BO32515.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 11971603..11971767 | 2117..2281 | 100 | -> | Plus |
| arm_3L | 11971835..11972014 | 2282..2461 | 100 | -> | Plus |
| arm_3L | 11972085..11972252 | 2462..2629 | 100 | -> | Plus |
| arm_3L | 11972304..11972492 | 2630..2818 | 100 | -> | Plus |
| arm_3L | 11969324..11969595 | 17..289 | 98 | -> | Plus |
| arm_3L | 11969674..11971500 | 290..2116 | 100 | -> | Plus |
| arm_3L | 11972560..11972742 | 2819..3001 | 100 | -> | Plus |
| arm_3L | 11972800..11972991 | 3002..3193 | 100 | -> | Plus |
| arm_3L | 11973050..11973844 | 3194..3990 | 99 | | Plus |
BO32515.pep Sequence
Translation from 16 to 4006
> BO32515.pep
MKATLLTVVALTAVVALVGAADPECIYRRTRNLPMHWPKPLNCSSYYRCT
AKNAVRTVTCAPGKEYNPKNGKCTMAGRSLCKLSLLAPLAEATNVCSTEV
NGAYIANSGSCGEFYICDEQIAYPQKCDLGSFFNETLAACIPDANSTCWQ
NLCINKTNGVFVENEANCGSYYVCSNGEATLQTCPQGSFFNTSVAACTVD
QGNSQCWVNYCIGQDDGSAVADKSNCSLFYVCSNNTATAQECPEGSYFES
NNWGCVPGTCTTESPCDDSTTTTTESCAEETTEPPASCDCGDIKNADFIP
DEENCRKYFICIDGVLVAADCGKGNVFNANLSVCEVDADNTCCVADCTDG
EAKVDPQDCTKYFKCQSGDWTSVSCDSGSYFNETLNCCQVDVNNVCIDAK
SNSTQIPTTSTVETSSVDKCNAKDPPASGKNCWTYQHCISGQWEDGTCPN
NTYFDASVGICREDTENVCPENRSSGSRQKRSVEDCTCEGGIAQGTIIGH
STDCDKYLICENGQLVEGVCGVGNVFQKSSGICVPDTKATCWVCSNKPNG
YQMADPTDCTSYLTCWNGLATKHTCGSGEWYNGDGNCVIDVNAKCINPCS
CGNGNVAHPICTNYFQCTDGVPQVKQCVVGEAFDSATGQCSTTVECSAKN
CATASDGTTYPVAGETGQFYVCLSNEATIQPCPVNTGYSAALGICLDQPS
PDCDQTICNSAAVDSTYPSNDNDSSTFCLCRDSGAYIQSCPTGLFYDATD
QVCTFSGNCDPQVCNDQSEYFVSPDYEDPNSFCLCRAGEPITVSCPIGYT
FNTEELECVLIPLPDPRCCANGCSGKTDFSTFPTIEGTDGFCLCVDDVPK
YISCPENSQYDLELGACTATEEETTCPVNACTVGICESALDFNTFPVSSD
PSGFCYCLDSCPIYETCLDDLVYNEDLKRCTEPEDPSVVSRCDAEKCDSI
PDFTPYPSINGTDGFCYCNGGLPVFRECEENQEFDPAVGFCRTVVDSCVT
ALCDANQCATLDNYVPFPTNTASDDDGAFCYCKDGEVILEQCSPEMVFSA
DLGRCTVQAAPECVCAPGKCGSSDGYTTYEALNTNEGFCLCVSGTPVFTE
CLNGETYNSILGACFSSTAKIIASGLCDDRRCHSRAVVDATFAAVNTTSG
YCSCQDVGVSTFINCADEHVYEESAGTCVVAACDYTSCLNRVAFEPFEAK
NTTEGFCSCDGVPYFHQCQTGHVFDKAQGICLLKDTMAMISCNLRECLKR
SQFEPFAAENTNSGFCSCDDLQRVSVTYHPCGEGEIFAPEFGMCTSHSIQ
KRSVEAEENVRSLNLFKKFFPKLFASFLDH
BO32515.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:27:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG43896-PB | 1324 | CG43896-PB | 1..1324 | 1..1324 | 7422 | 100 | Plus |
| CG43896-PD | 2113 | CG43896-PD | 1..1310 | 1..1310 | 7348 | 99.9 | Plus |
| CG43896-PC | 2113 | CG43896-PC | 1..1310 | 1..1310 | 7348 | 99.9 | Plus |
| CG43896-PD | 2113 | CG43896-PD | 431..1747 | 42..1312 | 655 | 22.7 | Plus |
| CG43896-PC | 2113 | CG43896-PC | 431..1747 | 42..1312 | 655 | 22.7 | Plus |
| CG17826-PA | 751 | CG17826-PA | 10..743 | 77..808 | 633 | 25.6 | Plus |
| CG17826-PA | 751 | CG17826-PA | 31..748 | 216..935 | 588 | 25 | Plus |
| CG17826-PA | 751 | CG17826-PA | 29..695 | 288..970 | 570 | 25.5 | Plus |
| CG31077-PB | 988 | CG31077-PB | 39..979 | 102..1064 | 515 | 22.4 | Plus |
| CG43896-PD | 2113 | CG43896-PD | 1577..2099 | 42..541 | 420 | 25.1 | Plus |
| CG43896-PC | 2113 | CG43896-PC | 1577..2099 | 42..541 | 420 | 25.1 | Plus |
| CG43896-PD | 2113 | CG43896-PD | 1519..2099 | 42..595 | 416 | 24.6 | Plus |
| CG43896-PC | 2113 | CG43896-PC | 1519..2099 | 42..595 | 416 | 24.6 | Plus |
| CG43896-PD | 2113 | CG43896-PD | 611..1884 | 43..1255 | 396 | 21.1 | Plus |
| CG43896-PD | 2113 | CG43896-PD | 1042..2099 | 60..1063 | 396 | 20.5 | Plus |
| CG43896-PC | 2113 | CG43896-PC | 611..1884 | 43..1255 | 396 | 21.1 | Plus |
| CG43896-PC | 2113 | CG43896-PC | 1042..2099 | 60..1063 | 396 | 20.5 | Plus |
| CG43896-PD | 2113 | CG43896-PD | 1696..2099 | 40..396 | 385 | 25.4 | Plus |
| CG43896-PC | 2113 | CG43896-PC | 1696..2099 | 40..396 | 385 | 25.4 | Plus |
| CG43896-PD | 2113 | CG43896-PD | 1637..2099 | 38..469 | 352 | 24.3 | Plus |
| CG43896-PC | 2113 | CG43896-PC | 1637..2099 | 38..469 | 352 | 24.3 | Plus |
| CG17826-PA | 751 | CG17826-PA | 40..666 | 503..1185 | 352 | 22.3 | Plus |
| CG17826-PA | 751 | CG17826-PA | 359..751 | 40..396 | 258 | 22.7 | Plus |
